RNA–Protein interactions for RNA: ENST00000515395.5

SSBP2-219, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2 BASIC

Gene SSBP2, Length 1,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-219ENST00000515395 KCNQ3O43525 872 aa13.37□□□□□ -0.27
SSBP2-219ENST00000515395 RPS6KA4O75676 772 aa13.37□□□□□ -0.27
SSBP2-219ENST00000515395 CYP19A1P11511 503 aaPredicted RBP13.37□□□□□ -0.27
SSBP2-219ENST00000515395 CALD1Q05682 793 aaKnown RBP13.37□□□□□ -0.27
SSBP2-219ENST00000515395 TRAPPC3LQ5T215 181 aa13.37□□□□□ -0.27
SSBP2-219ENST00000515395 CCDC87Q9NVE4 849 aa13.37□□□□□ -0.27
SSBP2-219ENST00000515395 TSPYL4Q9UJ04 414 aa13.37□□□□□ -0.27
SSBP2-219ENST00000515395 TRIM35Q9UPQ4 493 aa13.37□□□□□ -0.27
SSBP2-219ENST00000515395 PPP1R1BQ9UD71 204 aaPredicted RBP13.36□□□□□ -0.27
SSBP2-219ENST00000515395 LAS1LQ9Y4W2 734 aaKnown RBP13.36□□□□□ -0.27
SSBP2-219ENST00000515395 LAMB4A4D0S4 1761 aa13.36□□□□□ -0.27
SSBP2-219ENST00000515395 C4AP0C0L4 1744 aa13.36□□□□□ -0.27
SSBP2-219ENST00000515395 CCER2I3L3R5 266 aa13.35□□□□□ -0.27
SSBP2-219ENST00000515395 SNRPA1P09661 255 aaKnown RBP13.35□□□□□ -0.27
SSBP2-219ENST00000515395 POLD1P28340 1107 aa13.35□□□□□ -0.27
SSBP2-219ENST00000515395 BABAM1Q9NWV8 329 aa13.35□□□□□ -0.27
SSBP2-219ENST00000515395 COL24A1Q17RW2 1714 aa13.34□□□□□ -0.27
SSBP2-219ENST00000515395 RFC4P35249 363 aa13.34□□□□□ -0.27
SSBP2-219ENST00000515395 INTS5Q6P9B9 1019 aaKnown RBP13.34□□□□□ -0.27
SSBP2-219ENST00000515395 SMIM5Q71RC9 77 aa13.34□□□□□ -0.27
SSBP2-219ENST00000515395 NPM2Q86SE8 214 aaKnown RBP13.34□□□□□ -0.27
SSBP2-219ENST00000515395 AMIGO3Q86WK7 504 aa13.34□□□□□ -0.27
SSBP2-219ENST00000515395 CANXP27824 592 aaKnown RBP13.33□□□□□ -0.27
SSBP2-219ENST00000515395 EIF4A1P60842 406 aaKnown RBP13.33□□□□□ -0.27
SSBP2-219ENST00000515395 ARHGEF1Q92888 912 aaKnown RBP13.33□□□□□ -0.27
SSBP2-219ENST00000515395 MSL1Q68DK7 614 aa13.32□□□□□ -0.28
SSBP2-219ENST00000515395 ZBTB1Q9Y2K1 713 aa13.32□□□□□ -0.28
SSBP2-219ENST00000515395 SENP3-EIF4A1A0A087X0R7 540 aa13.32□□□□□ -0.28
SSBP2-219ENST00000515395 CHL1O00533 1208 aa13.32□□□□□ -0.28
SSBP2-219ENST00000515395 CCDC27Q2M243 656 aa13.32□□□□□ -0.28
SSBP2-219ENST00000515395 CFAP44Q96MT7 982 aa13.32□□□□□ -0.28
SSBP2-219ENST00000515395 ZNF330Q9Y3S2 320 aaPredicted RBP13.32□□□□□ -0.28
SSBP2-219ENST00000515395 USP16Q9Y5T5 823 aa13.32□□□□□ -0.28
SSBP2-219ENST00000515395 SOS1Q07889 1333 aaPredicted RBP13.31□□□□□ -0.28
SSBP2-219ENST00000515395 COL15A1P39059 1388 aa13.31□□□□□ -0.28
SSBP2-219ENST00000515395 SRCAPQ6ZRS2 3230 aa13.31□□□□□ -0.28
SSBP2-219ENST00000515395 PRAMEF22A3QJZ6 481 aa13.31□□□□□ -0.28
SSBP2-219ENST00000515395 ZPR1O75312 459 aa13.31□□□□□ -0.28
SSBP2-219ENST00000515395 GIGYF1O75420 1035 aaPredicted RBP13.31□□□□□ -0.28
SSBP2-219ENST00000515395 A1BGP04217 495 aa13.31□□□□□ -0.28
SSBP2-219ENST00000515395 PTGER2P43116 358 aa13.31□□□□□ -0.28
SSBP2-219ENST00000515395 GNAI1P63096 354 aa13.31□□□□□ -0.28
SSBP2-219ENST00000515395 NCBP3Q53F19 620 aaKnown RBP13.31□□□□□ -0.28
SSBP2-219ENST00000515395 SALL2Q9Y467 1007 aaPredicted RBP13.31□□□□□ -0.28
SSBP2-219ENST00000515395 A0A087WZG4 1122 aa13.3□□□□□ -0.28
SSBP2-219ENST00000515395 IL6STP40189 918 aaPredicted RBP13.3□□□□□ -0.28
SSBP2-219ENST00000515395 MIER1Q8N108 512 aa13.3□□□□□ -0.28
SSBP2-219ENST00000515395 NLGN1Q8N2Q7 840 aa13.3□□□□□ -0.28
SSBP2-219ENST00000515395 NGEFQ8N5V2 710 aa13.3□□□□□ -0.28
SSBP2-219ENST00000515395 ARXQ96QS3 562 aa13.3□□□□□ -0.28
SSBP2-219ENST00000515395 IFT57Q9NWB7 429 aa13.3□□□□□ -0.28
SSBP2-219ENST00000515395 WWC1Q8IX03 1113 aa13.29□□□□□ -0.28
SSBP2-219ENST00000515395 SGIP1Q9BQI5 828 aa13.29□□□□□ -0.28
SSBP2-219ENST00000515395 USP42Q9H9J4 1324 aaKnown RBP13.29□□□□□ -0.28
SSBP2-219ENST00000515395 GYS1P13807 737 aa13.28□□□□□ -0.28
SSBP2-219ENST00000515395 EIF5P55010 431 aaKnown RBP13.28□□□□□ -0.28
SSBP2-219ENST00000515395 MBIPQ9NS73 344 aa13.28□□□□□ -0.28
SSBP2-219ENST00000515395 ZNF853P0CG23 659 aa13.27□□□□□ -0.29
SSBP2-219ENST00000515395 EIF2S2P20042 333 aaKnown RBP13.27□□□□□ -0.29
SSBP2-219ENST00000515395 USPL1Q5W0Q7 1092 aa13.27□□□□□ -0.29
SSBP2-219ENST00000515395 KLHL34Q8N239 644 aa13.27□□□□□ -0.29
SSBP2-219ENST00000515395 SRP68Q9UHB9 627 aaKnown RBP13.27□□□□□ -0.29
SSBP2-219ENST00000515395 NARFQ9UHQ1 456 aa13.27□□□□□ -0.29
SSBP2-219ENST00000515395 SCN7AQ01118 1682 aa13.26□□□□□ -0.29
SSBP2-219ENST00000515395 PIP4K2AP48426 406 aaPredicted RBP13.26□□□□□ -0.29
SSBP2-219ENST00000515395 WDR63Q8IWG1 891 aa13.26□□□□□ -0.29
SSBP2-219ENST00000515395 IL16Q14005 1332 aa13.26□□□□□ -0.29
SSBP2-219ENST00000515395 BCORQ6W2J9 1755 aa13.25□□□□□ -0.29
SSBP2-219ENST00000515395 MMP10P09238 476 aa13.25□□□□□ -0.29
SSBP2-219ENST00000515395 DZIP3Q86Y13 1208 aaKnown RBP13.25□□□□□ -0.29
SSBP2-219ENST00000515395 TBC1D2BQ9UPU7 963 aa13.25□□□□□ -0.29
SSBP2-219ENST00000515395 PARP3Q9Y6F1 533 aa13.25□□□□□ -0.29
SSBP2-219ENST00000515395 ERBB4Q15303 1308 aa13.25□□□□□ -0.29
SSBP2-219ENST00000515395 HOXB7P09629 217 aa13.24□□□□□ -0.29
SSBP2-219ENST00000515395 MYL6BP14649 208 aa13.24□□□□□ -0.29
SSBP2-219ENST00000515395 FHDC1Q9C0D6 1143 aaPredicted RBP13.24□□□□□ -0.29
SSBP2-219ENST00000515395 NBPF26B4DH59 902 aa13.23□□□□□ -0.29
SSBP2-219ENST00000515395 FKBP8Q14318 412 aa13.23□□□□□ -0.29
SSBP2-219ENST00000515395 KRT24Q2M2I5 525 aa13.23□□□□□ -0.29
SSBP2-219ENST00000515395 DUSP27Q5VZP5 1158 aa13.23□□□□□ -0.29
SSBP2-219ENST00000515395 NBPF10Q6P3W6 841 aaKnown RBP13.23□□□□□ -0.29
SSBP2-219ENST00000515395 NBPF15Q8N660 670 aa13.23□□□□□ -0.29
SSBP2-219ENST00000515395 NECTIN2Q92692 538 aa13.23□□□□□ -0.29
SSBP2-219ENST00000515395 CHMP4AQ9BY43 222 aa13.23□□□□□ -0.29
SSBP2-219ENST00000515395 NUP98P52948 1817 aa13.23□□□□□ -0.29
SSBP2-219ENST00000515395 HDGFL1Q5TGJ6 251 aa13.22□□□□□ -0.29
SSBP2-219ENST00000515395 TSR2Q969E8 191 aaKnown RBP13.22□□□□□ -0.29
SSBP2-219ENST00000515395 SYT17Q9BSW7 474 aa13.22□□□□□ -0.29
SSBP2-219ENST00000515395 ZNF652Q9Y2D9 606 aa13.22□□□□□ -0.29
SSBP2-219ENST00000515395 AFDNP55196 1824 aaKnown RBP13.22□□□□□ -0.29
SSBP2-219ENST00000515395 ELL2O00472 640 aaPredicted RBP13.21□□□□□ -0.29
SSBP2-219ENST00000515395 KIF6Q6ZMV9 814 aa13.21□□□□□ -0.29
SSBP2-219ENST00000515395 CAMTA2O94983 1202 aa13.2□□□□□ -0.3
SSBP2-219ENST00000515395 GOLGA2Q08379 1002 aa13.2□□□□□ -0.3
SSBP2-219ENST00000515395 BICDL1Q6ZP65 573 aa13.2□□□□□ -0.3
SSBP2-219ENST00000515395 MYH16Q9H6N6 1097 aa13.2□□□□□ -0.3
SSBP2-219ENST00000515395 DBF4Q9UBU7 674 aaPredicted RBP13.2□□□□□ -0.3
SSBP2-219ENST00000515395 CD2APQ9Y5K6 639 aa13.2□□□□□ -0.3
SSBP2-219ENST00000515395 KIF13BQ9NQT8 1826 aa13.2□□□□□ -0.3
SSBP2-219ENST00000515395 CACNA1FO60840 1977 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms