RNA–Protein interactions for RNA: ENST00000515219.5

DDR1-277, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-277ENST00000515219 MMP10P09238 476 aa22.94■■□□□ 1.26
DDR1-277ENST00000515219 RIPK4P57078 832 aa22.94■■□□□ 1.26
DDR1-277ENST00000515219 NLGN2Q8NFZ4 835 aa22.94■■□□□ 1.26
DDR1-277ENST00000515219 THUMPD2Q9BTF0 503 aaKnown RBP22.94■■□□□ 1.26
DDR1-277ENST00000515219 SRP68Q9UHB9 627 aaKnown RBP22.94■■□□□ 1.26
DDR1-277ENST00000515219 ADAMTS8Q9UP79 889 aa22.94■■□□□ 1.26
DDR1-277ENST00000515219 USP42Q9H9J4 1324 aaKnown RBP22.93■■□□□ 1.26
DDR1-277ENST00000515219 MIS18AQ9NYP9 233 aa22.93■■□□□ 1.26
DDR1-277ENST00000515219 COL15A1P39059 1388 aa22.92■■□□□ 1.26
DDR1-277ENST00000515219 TMPOP42166 694 aaKnown RBP22.92■■□□□ 1.26
DDR1-277ENST00000515219 CD2APQ9Y5K6 639 aa22.92■■□□□ 1.26
DDR1-277ENST00000515219 ZPR1O75312 459 aa22.91■■□□□ 1.26
DDR1-277ENST00000515219 PNISRQ8TF01 805 aaKnown RBP22.91■■□□□ 1.26
DDR1-277ENST00000515219 RUNDC1Q96C34 613 aa22.91■■□□□ 1.26
DDR1-277ENST00000515219 NEUROD2Q15784 382 aa22.9■■□□□ 1.26
DDR1-277ENST00000515219 RRP7AQ9Y3A4 280 aaKnown RBP22.9■■□□□ 1.26
DDR1-277ENST00000515219 KDM3BQ7LBC6 1761 aa22.9■■□□□ 1.26
DDR1-277ENST00000515219 SNRPA1P09661 255 aaKnown RBP22.89■■□□□ 1.25
DDR1-277ENST00000515219 LMOD3Q0VAK6 560 aa22.89■■□□□ 1.25
DDR1-277ENST00000515219 FKBP8Q14318 412 aa22.89■■□□□ 1.25
DDR1-277ENST00000515219 GPR162Q16538 588 aa22.89■■□□□ 1.25
DDR1-277ENST00000515219 USPL1Q5W0Q7 1092 aa22.89■■□□□ 1.25
DDR1-277ENST00000515219 PELP1Q8IZL8 1130 aaKnown RBP22.89■■□□□ 1.25
DDR1-277ENST00000515219 ZNF330Q9Y3S2 320 aaPredicted RBP22.89■■□□□ 1.25
DDR1-277ENST00000515219 USP16Q9Y5T5 823 aa22.89■■□□□ 1.25
DDR1-277ENST00000515219 PARP3Q9Y6F1 533 aa22.89■■□□□ 1.25
DDR1-277ENST00000515219 PRAMEF22A3QJZ6 481 aa22.88■■□□□ 1.25
DDR1-277ENST00000515219 ANP32CO43423 234 aa22.88■■□□□ 1.25
DDR1-277ENST00000515219 A1BGP04217 495 aa22.88■■□□□ 1.25
DDR1-277ENST00000515219 NARFQ9UHQ1 456 aa22.88■■□□□ 1.25
DDR1-277ENST00000515219 EIF5P55010 431 aaKnown RBP22.87■■□□□ 1.25
DDR1-277ENST00000515219 NPM2Q86SE8 214 aaKnown RBP22.86■■□□□ 1.25
DDR1-277ENST00000515219 A0A087WZG4 1122 aa22.85■■□□□ 1.25
DDR1-277ENST00000515219 IL6STP40189 918 aaPredicted RBP22.85■■□□□ 1.25
DDR1-277ENST00000515219 CCDC184Q52MB2 194 aa22.84■■□□□ 1.25
DDR1-277ENST00000515219 LAMB4A4D0S4 1761 aa22.84■■□□□ 1.25
DDR1-277ENST00000515219 KIF13BQ9NQT8 1826 aa22.83■■□□□ 1.25
DDR1-277ENST00000515219 TSPYL4Q9UJ04 414 aa22.83■■□□□ 1.25
DDR1-277ENST00000515219 PIP4K2AP48426 406 aaPredicted RBP22.82■■□□□ 1.24
DDR1-277ENST00000515219 EIF4A1P60842 406 aaKnown RBP22.82■■□□□ 1.24
DDR1-277ENST00000515219 DDR1Q08345 913 aa22.82■■□□□ 1.24
DDR1-277ENST00000515219 TBC1D2BQ9UPU7 963 aa22.82■■□□□ 1.24
DDR1-277ENST00000515219 TM4SF1P30408 202 aa22.81■■□□□ 1.24
DDR1-277ENST00000515219 BCL2L12Q9HB09 334 aa22.81■■□□□ 1.24
DDR1-277ENST00000515219 GIGYF1O75420 1035 aaPredicted RBP22.8■■□□□ 1.24
DDR1-277ENST00000515219 TRIM35Q9UPQ4 493 aa22.8■■□□□ 1.24
DDR1-277ENST00000515219 C10orf71Q711Q0 1435 aa22.8■■□□□ 1.24
DDR1-277ENST00000515219 CHD4Q14839 1912 aa22.8■■□□□ 1.24
DDR1-277ENST00000515219 N4BP2Q86UW6 1770 aaPredicted RBP22.79■■□□□ 1.24
DDR1-277ENST00000515219 SCN7AQ01118 1682 aa22.79■■□□□ 1.24
DDR1-277ENST00000515219 POLRMTO00411 1230 aaKnown RBP22.79■■□□□ 1.24
DDR1-277ENST00000515219 YY1P25490 414 aa22.79■■□□□ 1.24
DDR1-277ENST00000515219 NFIXQ14938 502 aa22.79■■□□□ 1.24
DDR1-277ENST00000515219 APAF1O14727 1248 aa22.78■■□□□ 1.24
DDR1-277ENST00000515219 YBX3P16989 372 aaKnown RBP eCLIP22.78■■□□□ 1.24
DDR1-277ENST00000515219 MRS2Q9HD23 443 aa22.78■■□□□ 1.24
DDR1-277ENST00000515219 BABAM1Q9NWV8 329 aa22.78■■□□□ 1.24
DDR1-277ENST00000515219 WWC3Q9ULE0 1092 aa22.78■■□□□ 1.24
DDR1-277ENST00000515219 AFDNP55196 1824 aaKnown RBP22.78■■□□□ 1.24
DDR1-277ENST00000515219 TGFB2P61812 414 aa22.77■■□□□ 1.24
DDR1-277ENST00000515219 BICDL1Q6ZP65 573 aa22.77■■□□□ 1.24
DDR1-277ENST00000515219 DZIP3Q86Y13 1208 aaKnown RBP22.77■■□□□ 1.24
DDR1-277ENST00000515219 LAS1LQ9Y4W2 734 aaKnown RBP22.77■■□□□ 1.24
DDR1-277ENST00000515219 KIAA1551Q9HCM1 1747 aa22.77■■□□□ 1.23
DDR1-277ENST00000515219 NBPF26B4DH59 902 aa22.76■■□□□ 1.23
DDR1-277ENST00000515219 NBPF10Q6P3W6 841 aaKnown RBP22.76■■□□□ 1.23
DDR1-277ENST00000515219 NBPF15Q8N660 670 aa22.76■■□□□ 1.23
DDR1-277ENST00000515219 BCORQ6W2J9 1755 aa22.76■■□□□ 1.23
DDR1-277ENST00000515219 PXDNLA1KZ92 1463 aa22.75■■□□□ 1.23
DDR1-277ENST00000515219 GRIN3BO60391 1043 aa22.75■■□□□ 1.23
DDR1-277ENST00000515219 A0A0G2JLW4 131 aa22.74■■□□□ 1.23
DDR1-277ENST00000515219 CAMTA2O94983 1202 aa22.74■■□□□ 1.23
DDR1-277ENST00000515219 SERPINB2P05120 415 aa22.74■■□□□ 1.23
DDR1-277ENST00000515219 TBC1D9BQ66K14 1250 aa22.74■■□□□ 1.23
DDR1-277ENST00000515219 NRXN2Q9P2S2 1712 aa22.73■■□□□ 1.23
DDR1-277ENST00000515219 CHL1O00533 1208 aa22.72■■□□□ 1.23
DDR1-277ENST00000515219 DPEP1P16444 411 aa22.72■■□□□ 1.23
DDR1-277ENST00000515219 NGEFQ8N5V2 710 aa22.72■■□□□ 1.23
DDR1-277ENST00000515219 ZNF652Q9Y2D9 606 aa22.7■■□□□ 1.22
DDR1-277ENST00000515219 BRCA1P38398 1863 aaKnown RBP22.69■■□□□ 1.22
DDR1-277ENST00000515219 MYL6BP14649 208 aa22.69■■□□□ 1.22
DDR1-277ENST00000515219 EIF2S2P20042 333 aaKnown RBP22.69■■□□□ 1.22
DDR1-277ENST00000515219 SETDB2Q96T68 719 aa22.69■■□□□ 1.22
DDR1-277ENST00000515219 CARMIL3Q8ND23 1372 aa22.68■■□□□ 1.22
DDR1-277ENST00000515219 CFAP44Q96MT7 982 aa22.68■■□□□ 1.22
DDR1-277ENST00000515219 BCS1LQ9Y276 419 aa22.68■■□□□ 1.22
DDR1-277ENST00000515219 ERBB4Q15303 1308 aa22.67■■□□□ 1.22
DDR1-277ENST00000515219 SENP3-EIF4A1A0A087X0R7 540 aa22.67■■□□□ 1.22
DDR1-277ENST00000515219 CALD1Q05682 793 aaKnown RBP22.67■■□□□ 1.22
DDR1-277ENST00000515219 CLEC4GQ6UXB4 293 aa22.67■■□□□ 1.22
DDR1-277ENST00000515219 GOLGB1Q14789 3259 aaKnown RBP22.67■■□□□ 1.22
DDR1-277ENST00000515219 NPHP1O15259 732 aa22.66■■□□□ 1.22
DDR1-277ENST00000515219 KCNA3P22001 575 aa22.66■■□□□ 1.22
DDR1-277ENST00000515219 CHRNA5P30532 468 aa22.66■■□□□ 1.22
DDR1-277ENST00000515219 KRT24Q2M2I5 525 aa22.66■■□□□ 1.22
DDR1-277ENST00000515219 NECTIN2Q92692 538 aa22.65■■□□□ 1.22
DDR1-277ENST00000515219 PIM2Q9P1W9 311 aa22.65■■□□□ 1.22
DDR1-277ENST00000515219 NUP98P52948 1817 aa22.64■■□□□ 1.22
DDR1-277ENST00000515219 HLFQ16534 295 aa22.64■■□□□ 1.21
DDR1-277ENST00000515219 KIF6Q6ZMV9 814 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms