RNA–Protein interactions for RNA: ENST00000514133.1

SGCB-203, Transcript of sarcoglycan beta, humanhuman

TSL 5

Gene SGCB, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-203ENST00000514133 C21orf2O43822 256 aa6.14□□□□□ -1.43
SGCB-203ENST00000514133 PPFIA3O75145 1194 aa6.14□□□□□ -1.43
SGCB-203ENST00000514133 RNF144AP50876 292 aaPredicted RBP6.14□□□□□ -1.43
SGCB-203ENST00000514133 RAB15P59190 212 aa6.14□□□□□ -1.43
SGCB-203ENST00000514133 FKBP4Q02790 459 aaKnown RBP eCLIP6.14□□□□□ -1.43
SGCB-203ENST00000514133 MTMR3Q13615 1198 aa6.14□□□□□ -1.43
SGCB-203ENST00000514133 WDR44Q5JSH3 913 aa6.14□□□□□ -1.43
SGCB-203ENST00000514133 TSEN2Q8NCE0 465 aaKnown RBP6.14□□□□□ -1.43
SGCB-203ENST00000514133 TCF3P15923 654 aa6.13□□□□□ -1.43
SGCB-203ENST00000514133 TAGLNQ01995 201 aaKnown RBP6.13□□□□□ -1.43
SGCB-203ENST00000514133 CAPN12Q6ZSI9 719 aa6.13□□□□□ -1.43
SGCB-203ENST00000514133 GAS2L2Q8NHY3 880 aa6.13□□□□□ -1.43
SGCB-203ENST00000514133 TMPRSS4Q9NRS4 437 aa6.13□□□□□ -1.43
SGCB-203ENST00000514133 DCTN4Q9UJW0 460 aa6.13□□□□□ -1.43
SGCB-203ENST00000514133 DNMT3AQ9Y6K1 912 aaPredicted RBP6.13□□□□□ -1.43
SGCB-203ENST00000514133 SLC35F4A4IF30 521 aa6.12□□□□□ -1.43
SGCB-203ENST00000514133 MYCP01106 439 aaPredicted RBP6.12□□□□□ -1.43
SGCB-203ENST00000514133 GNRH1P01148 92 aa6.12□□□□□ -1.43
SGCB-203ENST00000514133 ADD1P35611 737 aaKnown RBP6.12□□□□□ -1.43
SGCB-203ENST00000514133 RELBQ01201 579 aa6.12□□□□□ -1.43
SGCB-203ENST00000514133 PTSQ03393 145 aa6.12□□□□□ -1.43
SGCB-203ENST00000514133 SF3B2Q13435 895 aaKnown RBP6.12□□□□□ -1.43
SGCB-203ENST00000514133 FKBP5Q13451 457 aaPredicted RBP6.12□□□□□ -1.43
SGCB-203ENST00000514133 NAA30Q147X3 362 aaPredicted RBP6.12□□□□□ -1.43
SGCB-203ENST00000514133 ZSCAN29Q8IWY8 852 aaPredicted RBP6.12□□□□□ -1.43
SGCB-203ENST00000514133 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.12□□□□□ -1.43
SGCB-203ENST00000514133 ASB16Q96NS5 453 aa6.12□□□□□ -1.43
SGCB-203ENST00000514133 POLMQ9NP87 494 aaPredicted RBP6.12□□□□□ -1.43
SGCB-203ENST00000514133 PTCD1O75127 700 aaKnown RBP6.11□□□□□ -1.43
SGCB-203ENST00000514133 WEE1P30291 646 aa6.11□□□□□ -1.43
SGCB-203ENST00000514133 LYSMD3Q7Z3D4 306 aa6.11□□□□□ -1.43
SGCB-203ENST00000514133 RNF217Q8TC41 542 aa6.11□□□□□ -1.43
SGCB-203ENST00000514133 INSM2Q96T92 566 aaPredicted RBP6.11□□□□□ -1.43
SGCB-203ENST00000514133 GMPRP36959 345 aa6.1□□□□□ -1.43
SGCB-203ENST00000514133 CTSOP43234 321 aaPredicted RBP6.1□□□□□ -1.43
SGCB-203ENST00000514133 CLN3Q13286 438 aa6.1□□□□□ -1.43
SGCB-203ENST00000514133 ECM1Q16610 540 aa6.1□□□□□ -1.43
SGCB-203ENST00000514133 FBXO33Q7Z6M2 555 aa6.1□□□□□ -1.43
SGCB-203ENST00000514133 CCDC155Q8N6L0 562 aa6.1□□□□□ -1.43
SGCB-203ENST00000514133 KDF1Q8NAX2 398 aaPredicted RBP6.1□□□□□ -1.43
SGCB-203ENST00000514133 AGBL1Q96MI9 1066 aa6.1□□□□□ -1.43
SGCB-203ENST00000514133 NLRP3Q96P20 1036 aa6.1□□□□□ -1.43
SGCB-203ENST00000514133 BCL11AQ9H165 835 aa6.1□□□□□ -1.43
SGCB-203ENST00000514133 CYLDQ9NQC7 956 aa6.1□□□□□ -1.43
SGCB-203ENST00000514133 SOBPA7XYQ1 873 aa6.09□□□□□ -1.43
SGCB-203ENST00000514133 M0R2N6 131 aa6.09□□□□□ -1.43
SGCB-203ENST00000514133 ARHGAP4P98171 946 aa6.09□□□□□ -1.43
SGCB-203ENST00000514133 EAPPQ56P03 285 aaPredicted RBP6.09□□□□□ -1.43
SGCB-203ENST00000514133 ESCO1Q5FWF5 840 aa6.09□□□□□ -1.43
SGCB-203ENST00000514133 ZSCAN1Q8NBB4 408 aa6.09□□□□□ -1.43
SGCB-203ENST00000514133 ERBB4Q15303 1308 aa6.08□□□□□ -1.44
SGCB-203ENST00000514133 FIGNL2A6NMB9 653 aa6.08□□□□□ -1.44
SGCB-203ENST00000514133 SPATA31C2B4DYI2 1134 aa6.08□□□□□ -1.44
SGCB-203ENST00000514133 ITGA6P23229 1130 aa6.08□□□□□ -1.44
SGCB-203ENST00000514133 LCE2CQ5TA81 110 aa6.08□□□□□ -1.44
SGCB-203ENST00000514133 ZNF395Q9H8N7 513 aaPredicted RBP6.08□□□□□ -1.44
SGCB-203ENST00000514133 ZNF358Q9NW07 568 aa6.08□□□□□ -1.44
SGCB-203ENST00000514133 A0A1W2PRU2 124 aa6.07□□□□□ -1.44
SGCB-203ENST00000514133 H7C1W4 665 aa6.07□□□□□ -1.44
SGCB-203ENST00000514133 VAMP1P23763 118 aa6.07□□□□□ -1.44
SGCB-203ENST00000514133 SCTRP47872 440 aa6.07□□□□□ -1.44
SGCB-203ENST00000514133 TSNAXIP1Q2TAA8 658 aa6.07□□□□□ -1.44
SGCB-203ENST00000514133 SV2AQ7L0J3 742 aa6.07□□□□□ -1.44
SGCB-203ENST00000514133 RGL4Q8IZJ4 473 aa6.07□□□□□ -1.44
SGCB-203ENST00000514133 HELQQ8TDG4 1101 aa6.07□□□□□ -1.44
SGCB-203ENST00000514133 CHMP7Q8WUX9 453 aaPredicted RBP6.07□□□□□ -1.44
SGCB-203ENST00000514133 SCG3Q8WXD2 468 aaKnown RBP6.07□□□□□ -1.44
SGCB-203ENST00000514133 VTI1AQ96AJ9 217 aa6.07□□□□□ -1.44
SGCB-203ENST00000514133 DYRK1BQ9Y463 629 aa6.07□□□□□ -1.44
SGCB-203ENST00000514133 TMEM229AB2RXF0 380 aa6.06□□□□□ -1.44
SGCB-203ENST00000514133 FOXO3O43524 673 aa6.06□□□□□ -1.44
SGCB-203ENST00000514133 FAM13AO94988 1023 aa6.06□□□□□ -1.44
SGCB-203ENST00000514133 IGFBP4P22692 258 aa6.06□□□□□ -1.44
SGCB-203ENST00000514133 GTF2E1P29083 439 aaPredicted RBP6.06□□□□□ -1.44
SGCB-203ENST00000514133 VEGFBP49765 207 aa6.06□□□□□ -1.44
SGCB-203ENST00000514133 AAMPQ13685 434 aa6.06□□□□□ -1.44
SGCB-203ENST00000514133 SLC27A3Q5K4L6 730 aa6.06□□□□□ -1.44
SGCB-203ENST00000514133 FOXR1Q6PIV2 292 aa6.06□□□□□ -1.44
SGCB-203ENST00000514133 TNS4Q8IZW8 715 aa6.06□□□□□ -1.44
SGCB-203ENST00000514133 TMC1Q8TDI8 760 aa6.06□□□□□ -1.44
SGCB-203ENST00000514133 COL26A1Q96A83 441 aa6.06□□□□□ -1.44
SGCB-203ENST00000514133 ESYT1Q9BSJ8 1104 aa6.06□□□□□ -1.44
SGCB-203ENST00000514133 GRIP2Q9C0E4 1043 aa6.06□□□□□ -1.44
SGCB-203ENST00000514133 OSBPL3Q9H4L5 887 aa6.06□□□□□ -1.44
SGCB-203ENST00000514133 ATAD2Q6PL18 1390 aa6.06□□□□□ -1.44
SGCB-203ENST00000514133 BACH1O14867 736 aa6.05□□□□□ -1.44
SGCB-203ENST00000514133 STAU1O95793 577 aaKnown RBP6.05□□□□□ -1.44
SGCB-203ENST00000514133 RECKO95980 971 aa6.05□□□□□ -1.44
SGCB-203ENST00000514133 COL19A1Q14993 1142 aa6.05□□□□□ -1.44
SGCB-203ENST00000514133 SERTAD1Q9UHV2 236 aa6.05□□□□□ -1.44
SGCB-203ENST00000514133 SENP3-EIF4A1A0A087X0R7 540 aa6.04□□□□□ -1.44
SGCB-203ENST00000514133 MEN1O00255 615 aa6.04□□□□□ -1.44
SGCB-203ENST00000514133 WASLO00401 505 aaPredicted RBP6.04□□□□□ -1.44
SGCB-203ENST00000514133 NDUFB5O43674 189 aa6.04□□□□□ -1.44
SGCB-203ENST00000514133 P4HBP07237 508 aaKnown RBP6.04□□□□□ -1.44
SGCB-203ENST00000514133 MPSTP25325 297 aa6.04□□□□□ -1.44
SGCB-203ENST00000514133 GDF10P55107 478 aa6.04□□□□□ -1.44
SGCB-203ENST00000514133 LBRQ14739 615 aaKnown RBP6.04□□□□□ -1.44
SGCB-203ENST00000514133 TMC7Q7Z402 723 aa6.04□□□□□ -1.44
SGCB-203ENST00000514133 XAGE2Q96GT9 111 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms