RNA–Protein interactions for RNA: ENST00000514121.5

SPOP-219, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 4

Gene SPOP, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-219ENST00000514121 NUP188Q5SRE5 1749 aa18.36■□□□□ 0.53
SPOP-219ENST00000514121 DUSP27Q5VZP5 1158 aa18.36■□□□□ 0.53
SPOP-219ENST00000514121 FLAD1Q8NFF5 587 aa18.36■□□□□ 0.53
SPOP-219ENST00000514121 ELL2O00472 640 aaPredicted RBP18.35■□□□□ 0.53
SPOP-219ENST00000514121 MSH5O43196 834 aa18.35■□□□□ 0.53
SPOP-219ENST00000514121 PHF14O94880 888 aa18.35■□□□□ 0.53
SPOP-219ENST00000514121 TRAPPC3LQ5T215 181 aa18.35■□□□□ 0.53
SPOP-219ENST00000514121 SMIM5Q71RC9 77 aa18.35■□□□□ 0.53
SPOP-219ENST00000514121 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.34■□□□□ 0.53
SPOP-219ENST00000514121 E9PSI1 815 aa18.34■□□□□ 0.53
SPOP-219ENST00000514121 C8orf58Q8NAV2 365 aa18.34■□□□□ 0.53
SPOP-219ENST00000514121 ZBTB1Q9Y2K1 713 aa18.34■□□□□ 0.53
SPOP-219ENST00000514121 UBR2Q8IWV8 1755 aa18.33■□□□□ 0.53
SPOP-219ENST00000514121 PNPLA7Q6ZV29 1317 aa18.33■□□□□ 0.53
SPOP-219ENST00000514121 HOXB7P09629 217 aa18.33■□□□□ 0.52
SPOP-219ENST00000514121 SSFA2P28290 1259 aa18.33■□□□□ 0.52
SPOP-219ENST00000514121 NPM2Q86SE8 214 aaKnown RBP18.33■□□□□ 0.52
SPOP-219ENST00000514121 COL23A1Q86Y22 540 aaPredicted RBP18.33■□□□□ 0.52
SPOP-219ENST00000514121 ZNF831Q5JPB2 1677 aa18.33■□□□□ 0.52
SPOP-219ENST00000514121 KDM3BQ7LBC6 1761 aa18.32■□□□□ 0.52
SPOP-219ENST00000514121 FANCIQ9NVI1 1328 aa18.32■□□□□ 0.52
SPOP-219ENST00000514121 SLFN5Q08AF3 891 aa18.32■□□□□ 0.52
SPOP-219ENST00000514121 AMIGO3Q86WK7 504 aa18.32■□□□□ 0.52
SPOP-219ENST00000514121 NECTIN2Q92692 538 aa18.32■□□□□ 0.52
SPOP-219ENST00000514121 CDCA7LQ96GN5 454 aa18.32■□□□□ 0.52
SPOP-219ENST00000514121 ZNF330Q9Y3S2 320 aaPredicted RBP18.32■□□□□ 0.52
SPOP-219ENST00000514121 C4BP0C0L5 1744 aa18.32■□□□□ 0.52
SPOP-219ENST00000514121 C5P01031 1676 aa18.31■□□□□ 0.52
SPOP-219ENST00000514121 ADRA2BP18089 450 aa18.31■□□□□ 0.52
SPOP-219ENST00000514121 RFC4P35249 363 aa18.31■□□□□ 0.52
SPOP-219ENST00000514121 PIP4K2AP48426 406 aaPredicted RBP18.31■□□□□ 0.52
SPOP-219ENST00000514121 EXOSC9Q06265 439 aaKnown RBP18.31■□□□□ 0.52
SPOP-219ENST00000514121 TSPYL6Q8N831 410 aa18.31■□□□□ 0.52
SPOP-219ENST00000514121 ARHGEF1Q92888 912 aaKnown RBP18.31■□□□□ 0.52
SPOP-219ENST00000514121 PDGFDQ9GZP0 370 aaPredicted RBP18.31■□□□□ 0.52
SPOP-219ENST00000514121 SOS1Q07889 1333 aaPredicted RBP18.3■□□□□ 0.52
SPOP-219ENST00000514121 TJP1Q07157 1748 aa18.3■□□□□ 0.52
SPOP-219ENST00000514121 IL6STP40189 918 aaPredicted RBP18.3■□□□□ 0.52
SPOP-219ENST00000514121 EIF5P55010 431 aaKnown RBP18.3■□□□□ 0.52
SPOP-219ENST00000514121 ARXQ96QS3 562 aa18.3■□□□□ 0.52
SPOP-219ENST00000514121 CHMP4AQ9BY43 222 aa18.3■□□□□ 0.52
SPOP-219ENST00000514121 TAF1LQ8IZX4 1826 aa18.3■□□□□ 0.52
SPOP-219ENST00000514121 A0A087WZG4 1122 aa18.29■□□□□ 0.52
SPOP-219ENST00000514121 NBPF26B4DH59 902 aa18.29■□□□□ 0.52
SPOP-219ENST00000514121 TWISTNBQ3B726 338 aaPredicted RBP18.29■□□□□ 0.52
SPOP-219ENST00000514121 HDGFL1Q5TGJ6 251 aa18.29■□□□□ 0.52
SPOP-219ENST00000514121 NBPF10Q6P3W6 841 aaKnown RBP18.29■□□□□ 0.52
SPOP-219ENST00000514121 NBPF15Q8N660 670 aa18.29■□□□□ 0.52
SPOP-219ENST00000514121 SLC16A10Q8TF71 515 aa18.29■□□□□ 0.52
SPOP-219ENST00000514121 MYL6BP14649 208 aa18.28■□□□□ 0.52
SPOP-219ENST00000514121 ERBB4Q15303 1308 aa18.27■□□□□ 0.52
SPOP-219ENST00000514121 TRMT2AQ8IZ69 625 aaKnown RBP18.27■□□□□ 0.52
SPOP-219ENST00000514121 CICQ96RK0 1608 aaPredicted RBP18.27■□□□□ 0.51
SPOP-219ENST00000514121 ZBED9Q6R2W3 1325 aa18.26■□□□□ 0.51
SPOP-219ENST00000514121 ZPR1O75312 459 aa18.26■□□□□ 0.51
SPOP-219ENST00000514121 VAMP4O75379 141 aa18.26■□□□□ 0.51
SPOP-219ENST00000514121 ZBTB7AO95365 584 aa18.26■□□□□ 0.51
SPOP-219ENST00000514121 CCDC30Q5VVM6 783 aa18.26■□□□□ 0.51
SPOP-219ENST00000514121 DDX21Q9NR30 783 aaKnown RBP eCLIP18.26■□□□□ 0.51
SPOP-219ENST00000514121 ATF5Q9Y2D1 282 aaPredicted RBP18.26■□□□□ 0.51
SPOP-219ENST00000514121 MYH14Q7Z406 1995 aaKnown RBP18.25■□□□□ 0.51
SPOP-219ENST00000514121 ANXA1P04083 346 aa18.25■□□□□ 0.51
SPOP-219ENST00000514121 PDIA6Q15084 440 aa18.25■□□□□ 0.51
SPOP-219ENST00000514121 CHPF2Q9P2E5 772 aa18.25■□□□□ 0.51
SPOP-219ENST00000514121 DBF4Q9UBU7 674 aaPredicted RBP18.25■□□□□ 0.51
SPOP-219ENST00000514121 TBC1D2BQ9UPU7 963 aa18.25■□□□□ 0.51
SPOP-219ENST00000514121 COL5A3P25940 1745 aaPredicted RBP18.25■□□□□ 0.51
SPOP-219ENST00000514121 COL15A1P39059 1388 aa18.25■□□□□ 0.51
SPOP-219ENST00000514121 DZIP3Q86Y13 1208 aaKnown RBP18.24■□□□□ 0.51
SPOP-219ENST00000514121 MTFR1LQ9H019 292 aa18.24■□□□□ 0.51
SPOP-219ENST00000514121 SRP68Q9UHB9 627 aaKnown RBP18.24■□□□□ 0.51
SPOP-219ENST00000514121 NARFQ9UHQ1 456 aa18.24■□□□□ 0.51
SPOP-219ENST00000514121 PROSER3Q2NL68 480 aa18.23■□□□□ 0.51
SPOP-219ENST00000514121 STK31Q9BXU1 1019 aa18.23■□□□□ 0.51
SPOP-219ENST00000514121 SPON1Q9HCB6 807 aa18.23■□□□□ 0.51
SPOP-219ENST00000514121 TCERG1O14776 1098 aaKnown RBP18.22■□□□□ 0.51
SPOP-219ENST00000514121 USPL1Q5W0Q7 1092 aa18.22■□□□□ 0.51
SPOP-219ENST00000514121 MSL1Q68DK7 614 aa18.22■□□□□ 0.51
SPOP-219ENST00000514121 NLGN1Q8N2Q7 840 aa18.22■□□□□ 0.51
SPOP-219ENST00000514121 YTHDC1Q96MU7 727 aaKnown RBP18.22■□□□□ 0.51
SPOP-219ENST00000514121 HYPKQ9NX55 129 aa18.22■□□□□ 0.51
SPOP-219ENST00000514121 USP42Q9H9J4 1324 aaKnown RBP18.22■□□□□ 0.51
SPOP-219ENST00000514121 GYS1P13807 737 aa18.21■□□□□ 0.51
SPOP-219ENST00000514121 AIMP1Q12904 312 aaKnown RBP18.21■□□□□ 0.51
SPOP-219ENST00000514121 COPS6Q7L5N1 327 aa18.21■□□□□ 0.51
SPOP-219ENST00000514121 UBR3Q6ZT12 1888 aa18.2■□□□□ 0.5
SPOP-219ENST00000514121 SLC4A2P04920 1241 aa18.2■□□□□ 0.5
SPOP-219ENST00000514121 KIF6Q6ZMV9 814 aa18.2■□□□□ 0.5
SPOP-219ENST00000514121 TTLL7Q6ZT98 887 aa18.2■□□□□ 0.5
SPOP-219ENST00000514121 LRP10Q7Z4F1 713 aa18.2■□□□□ 0.5
SPOP-219ENST00000514121 XAGE3Q8WTP9 111 aa18.2■□□□□ 0.5
SPOP-219ENST00000514121 CAMTA2O94983 1202 aa18.19■□□□□ 0.5
SPOP-219ENST00000514121 POLD1P28340 1107 aa18.19■□□□□ 0.5
SPOP-219ENST00000514121 FKBP8Q14318 412 aa18.19■□□□□ 0.5
SPOP-219ENST00000514121 PHAXQ9H814 394 aaKnown RBP18.18■□□□□ 0.5
SPOP-219ENST00000514121 BCL2L12Q9HB09 334 aa18.18■□□□□ 0.5
SPOP-219ENST00000514121 ERVV-1B6SEH8 477 aa18.17■□□□□ 0.5
SPOP-219ENST00000514121 CT47B1P0C2W7 299 aaPredicted RBP18.17■□□□□ 0.5
SPOP-219ENST00000514121 CLEC4GQ6UXB4 293 aa18.17■□□□□ 0.5
SPOP-219ENST00000514121 ZBTB3Q9H5J0 574 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms