RNA–Protein interactions for RNA: ENST00000513326.5

HTT-211, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-211ENST00000513326 ADGRF5Q8IZF2 1346 aa7.34□□□□□ -1.23
HTT-211ENST00000513326 SENP3-EIF4A1A0A087X0R7 540 aa7.34□□□□□ -1.23
HTT-211ENST00000513326 ACTN4O43707 911 aaKnown RBP7.34□□□□□ -1.23
HTT-211ENST00000513326 RTL5Q5HYW3 569 aaPredicted RBP7.34□□□□□ -1.23
HTT-211ENST00000513326 IFFO2Q5TF58 517 aa7.34□□□□□ -1.23
HTT-211ENST00000513326 TMEM132EQ6IEE7 984 aa7.34□□□□□ -1.23
HTT-211ENST00000513326 ZNF784Q8NCA9 323 aaPredicted RBP7.34□□□□□ -1.23
HTT-211ENST00000513326 PDGFDQ9GZP0 370 aaPredicted RBP7.34□□□□□ -1.23
HTT-211ENST00000513326 IFT172Q9UG01 1749 aa7.34□□□□□ -1.23
HTT-211ENST00000513326 ADGRB2O60241 1585 aa7.33□□□□□ -1.24
HTT-211ENST00000513326 TRPM3Q9HCF6 1732 aaPredicted RBP7.33□□□□□ -1.24
HTT-211ENST00000513326 NRXN1Q9ULB1 1477 aa7.33□□□□□ -1.24
HTT-211ENST00000513326 A6NJR5 290 aa7.33□□□□□ -1.24
HTT-211ENST00000513326 PPP4CP60510 307 aa7.33□□□□□ -1.24
HTT-211ENST00000513326 GUCA2AQ02747 115 aa7.33□□□□□ -1.24
HTT-211ENST00000513326 MTMR2Q13614 643 aa7.33□□□□□ -1.24
HTT-211ENST00000513326 WNT2BQ93097 391 aa7.33□□□□□ -1.24
HTT-211ENST00000513326 HLA-CQ95604 372 aa7.33□□□□□ -1.24
HTT-211ENST00000513326 NRKQ7Z2Y5 1582 aa7.33□□□□□ -1.24
HTT-211ENST00000513326 KNDC1Q76NI1 1749 aa7.32□□□□□ -1.24
HTT-211ENST00000513326 CRYBG1Q9Y4K1 1723 aa7.32□□□□□ -1.24
HTT-211ENST00000513326 AP1G2O75843 785 aa7.32□□□□□ -1.24
HTT-211ENST00000513326 APBA3O96018 575 aa7.32□□□□□ -1.24
HTT-211ENST00000513326 KRTAP3-3Q9BYR6 98 aa7.32□□□□□ -1.24
HTT-211ENST00000513326 KRTAP3-2Q9BYR7 98 aa7.32□□□□□ -1.24
HTT-211ENST00000513326 SNRKQ9NRH2 765 aa7.32□□□□□ -1.24
HTT-211ENST00000513326 TSR3Q9UJK0 312 aaKnown RBP7.32□□□□□ -1.24
HTT-211ENST00000513326 HPS5Q9UPZ3 1129 aa7.32□□□□□ -1.24
HTT-211ENST00000513326 COL14A1Q05707 1796 aaKnown RBP7.32□□□□□ -1.24
HTT-211ENST00000513326 SBNO1A3KN83 1393 aa7.32□□□□□ -1.24
HTT-211ENST00000513326 NINLQ9Y2I6 1382 aa7.32□□□□□ -1.24
HTT-211ENST00000513326 MYOM1P52179 1685 aa7.32□□□□□ -1.24
HTT-211ENST00000513326 CASZ1Q86V15 1759 aa7.31□□□□□ -1.24
HTT-211ENST00000513326 C6orf229H3BNL8 230 aa7.31□□□□□ -1.24
HTT-211ENST00000513326 APBB1O00213 710 aa7.31□□□□□ -1.24
HTT-211ENST00000513326 RAD21O60216 631 aa7.31□□□□□ -1.24
HTT-211ENST00000513326 BCAMP50895 628 aa7.31□□□□□ -1.24
HTT-211ENST00000513326 MORN1Q5T089 497 aa7.31□□□□□ -1.24
HTT-211ENST00000513326 PMFBP1Q8TBY8 1022 aa7.31□□□□□ -1.24
HTT-211ENST00000513326 CLUAP1Q96AJ1 413 aa7.31□□□□□ -1.24
HTT-211ENST00000513326 UTRNP46939 3433 aa7.31□□□□□ -1.24
HTT-211ENST00000513326 ALS2Q96Q42 1657 aa7.31□□□□□ -1.24
HTT-211ENST00000513326 KCNQ2O43526 872 aa7.3□□□□□ -1.24
HTT-211ENST00000513326 Q3C1V9 767 aa7.3□□□□□ -1.24
HTT-211ENST00000513326 SPON1Q9HCB6 807 aa7.3□□□□□ -1.24
HTT-211ENST00000513326 PPP1R1BQ9UD71 204 aaPredicted RBP7.3□□□□□ -1.24
HTT-211ENST00000513326 ARHGEF10O15013 1369 aa7.3□□□□□ -1.24
HTT-211ENST00000513326 ABCC11Q96J66 1382 aa7.3□□□□□ -1.24
HTT-211ENST00000513326 SPATA31A1Q5TZJ5 1347 aa7.29□□□□□ -1.24
HTT-211ENST00000513326 YTHDC2Q9H6S0 1430 aaKnown RBP7.29□□□□□ -1.24
HTT-211ENST00000513326 RRBP1Q9P2E9 1410 aaKnown RBP7.29□□□□□ -1.24
HTT-211ENST00000513326 C1QTNF8P60827 252 aa7.29□□□□□ -1.24
HTT-211ENST00000513326 SAFB2Q14151 953 aaKnown RBP eCLIP7.29□□□□□ -1.24
HTT-211ENST00000513326 CHRNA2Q15822 529 aa7.29□□□□□ -1.24
HTT-211ENST00000513326 PTF1AQ7RTS3 328 aa7.29□□□□□ -1.24
HTT-211ENST00000513326 HELBQ8NG08 1087 aaPredicted RBP7.29□□□□□ -1.24
HTT-211ENST00000513326 SLC27A5Q9Y2P5 690 aa7.29□□□□□ -1.24
HTT-211ENST00000513326 PARD3Q8TEW0 1356 aa7.29□□□□□ -1.24
HTT-211ENST00000513326 USP17L8P0C7I0 530 aa7.28□□□□□ -1.24
HTT-211ENST00000513326 APLP1P51693 650 aa7.28□□□□□ -1.24
HTT-211ENST00000513326 PSME1Q06323 249 aa7.28□□□□□ -1.24
HTT-211ENST00000513326 PUS10Q3MIT2 529 aaKnown RBP7.28□□□□□ -1.24
HTT-211ENST00000513326 FAM196AQ6ZSG2 479 aa7.28□□□□□ -1.24
HTT-211ENST00000513326 MTMR14Q8NCE2 650 aa7.28□□□□□ -1.24
HTT-211ENST00000513326 PRM3Q9NNZ6 103 aa7.28□□□□□ -1.24
HTT-211ENST00000513326 USP35Q9P2H5 1018 aa7.28□□□□□ -1.24
HTT-211ENST00000513326 RPGRIP1LQ68CZ1 1315 aa7.27□□□□□ -1.24
HTT-211ENST00000513326 PRR36Q9H6K5 1346 aa7.27□□□□□ -1.24
HTT-211ENST00000513326 PIK3C2GO75747 1445 aa7.27□□□□□ -1.24
HTT-211ENST00000513326 CFAP99D6REC4 459 aa7.27□□□□□ -1.25
HTT-211ENST00000513326 TRAK2O60296 914 aa7.27□□□□□ -1.25
HTT-211ENST00000513326 ZBTB7AO95365 584 aa7.27□□□□□ -1.25
HTT-211ENST00000513326 RETREG3Q86VR2 466 aa7.27□□□□□ -1.25
HTT-211ENST00000513326 PPARGC1BQ86YN6 1023 aaKnown RBP7.27□□□□□ -1.25
HTT-211ENST00000513326 POM121Q96HA1 1249 aa7.27□□□□□ -1.25
HTT-211ENST00000513326 STRN4Q9NRL3 753 aa7.27□□□□□ -1.25
HTT-211ENST00000513326 COG6Q9Y2V7 657 aa7.27□□□□□ -1.25
HTT-211ENST00000513326 SALL2Q9Y467 1007 aaPredicted RBP7.27□□□□□ -1.25
HTT-211ENST00000513326 KIAA0232Q92628 1395 aa7.27□□□□□ -1.25
HTT-211ENST00000513326 SPATA31E1Q6ZUB1 1445 aa7.27□□□□□ -1.25
HTT-211ENST00000513326 CTDSPL2Q05D32 466 aa7.26□□□□□ -1.25
HTT-211ENST00000513326 RGL3Q3MIN7 710 aa7.26□□□□□ -1.25
HTT-211ENST00000513326 THSD4Q6ZMP0 1018 aa7.26□□□□□ -1.25
HTT-211ENST00000513326 PRR7Q8TB68 274 aa7.26□□□□□ -1.25
HTT-211ENST00000513326 TSC1Q92574 1164 aa7.26□□□□□ -1.25
HTT-211ENST00000513326 SYMPKQ92797 1274 aaKnown RBP7.26□□□□□ -1.25
HTT-211ENST00000513326 PRDM11Q9NQV5 511 aa7.26□□□□□ -1.25
HTT-211ENST00000513326 WBP1LQ9NX94 342 aa7.26□□□□□ -1.25
HTT-211ENST00000513326 PCDHB3Q9Y5E6 796 aa7.26□□□□□ -1.25
HTT-211ENST00000513326 PEAK1Q9H792 1746 aa7.26□□□□□ -1.25
HTT-211ENST00000513326 PHRF1Q9P1Y6 1649 aaKnown RBP7.26□□□□□ -1.25
HTT-211ENST00000513326 ACIN1Q9UKV3 1341 aaKnown RBP7.26□□□□□ -1.25
HTT-211ENST00000513326 NR1I2O75469 434 aa7.25□□□□□ -1.25
HTT-211ENST00000513326 NBPF8Q3BBV2 869 aa7.25□□□□□ -1.25
HTT-211ENST00000513326 NBPF14Q5TI25 921 aa7.25□□□□□ -1.25
HTT-211ENST00000513326 POTEGQ6S5H5 508 aa7.25□□□□□ -1.25
HTT-211ENST00000513326 NYAP1Q6ZVC0 841 aa7.25□□□□□ -1.25
HTT-211ENST00000513326 CDAN1Q8IWY9 1227 aa7.25□□□□□ -1.25
HTT-211ENST00000513326 PRAM1Q96QH2 718 aa7.25□□□□□ -1.25
HTT-211ENST00000513326 HIRIP3Q9BW71 556 aaPredicted RBP7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms