RNA–Protein interactions for RNA: ENST00000513321.1

NEIL3-202, Transcript of nei like DNA glycosylase 3, humanhuman

TSL 1 (best)

Gene NEIL3, Length 1,528 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-202ENST00000513321 GOLGA2Q08379 1002 aa27.3■■□□□ 1.96
NEIL3-202ENST00000513321 CCDC87Q9NVE4 849 aa27.3■■□□□ 1.96
NEIL3-202ENST00000513321 CICQ96RK0 1608 aaPredicted RBP27.29■■□□□ 1.96
NEIL3-202ENST00000513321 SMIM5Q71RC9 77 aa27.27■■□□□ 1.96
NEIL3-202ENST00000513321 COL5A3P25940 1745 aaPredicted RBP27.26■■□□□ 1.96
NEIL3-202ENST00000513321 RPS6KA4O75676 772 aa27.26■■□□□ 1.96
NEIL3-202ENST00000513321 A1BGP04217 495 aa27.26■■□□□ 1.96
NEIL3-202ENST00000513321 AMIGO3Q86WK7 504 aa27.26■■□□□ 1.96
NEIL3-202ENST00000513321 MYH16Q9H6N6 1097 aa27.26■■□□□ 1.96
NEIL3-202ENST00000513321 RTCBQ9Y3I0 505 aaKnown RBP27.26■■□□□ 1.96
NEIL3-202ENST00000513321 FANCIQ9NVI1 1328 aa27.26■■□□□ 1.95
NEIL3-202ENST00000513321 ELL2O00472 640 aaPredicted RBP27.25■■□□□ 1.95
NEIL3-202ENST00000513321 DUSP27Q5VZP5 1158 aa27.25■■□□□ 1.95
NEIL3-202ENST00000513321 C8orf58Q8NAV2 365 aa27.25■■□□□ 1.95
NEIL3-202ENST00000513321 ZBTB1Q9Y2K1 713 aa27.25■■□□□ 1.95
NEIL3-202ENST00000513321 PNPLA7Q6ZV29 1317 aa27.24■■□□□ 1.95
NEIL3-202ENST00000513321 PHF14O94880 888 aa27.24■■□□□ 1.95
NEIL3-202ENST00000513321 CANXP27824 592 aaKnown RBP27.24■■□□□ 1.95
NEIL3-202ENST00000513321 CDCA7LQ96GN5 454 aa27.24■■□□□ 1.95
NEIL3-202ENST00000513321 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.23■■□□□ 1.95
NEIL3-202ENST00000513321 E9PSI1 815 aa27.23■■□□□ 1.95
NEIL3-202ENST00000513321 EIF2S2P20042 333 aaKnown RBP27.23■■□□□ 1.95
NEIL3-202ENST00000513321 PDGFDQ9GZP0 370 aaPredicted RBP27.23■■□□□ 1.95
NEIL3-202ENST00000513321 MYH14Q7Z406 1995 aaKnown RBP27.22■■□□□ 1.95
NEIL3-202ENST00000513321 SSFA2P28290 1259 aa27.22■■□□□ 1.95
NEIL3-202ENST00000513321 SLFN5Q08AF3 891 aa27.22■■□□□ 1.95
NEIL3-202ENST00000513321 COL23A1Q86Y22 540 aaPredicted RBP27.22■■□□□ 1.95
NEIL3-202ENST00000513321 FLAD1Q8NFF5 587 aa27.22■■□□□ 1.95
NEIL3-202ENST00000513321 HOXB7P09629 217 aa27.21■■□□□ 1.95
NEIL3-202ENST00000513321 PIP4K2AP48426 406 aaPredicted RBP27.21■■□□□ 1.95
NEIL3-202ENST00000513321 TRAPPC3LQ5T215 181 aa27.21■■□□□ 1.95
NEIL3-202ENST00000513321 TSPYL6Q8N831 410 aa27.21■■□□□ 1.95
NEIL3-202ENST00000513321 MSH5O43196 834 aa27.2■■□□□ 1.94
NEIL3-202ENST00000513321 EXOSC9Q06265 439 aaKnown RBP27.2■■□□□ 1.94
NEIL3-202ENST00000513321 NECTIN2Q92692 538 aa27.2■■□□□ 1.94
NEIL3-202ENST00000513321 SOS1Q07889 1333 aaPredicted RBP27.19■■□□□ 1.94
NEIL3-202ENST00000513321 NBPF26B4DH59 902 aa27.19■■□□□ 1.94
NEIL3-202ENST00000513321 NBPF10Q6P3W6 841 aaKnown RBP27.19■■□□□ 1.94
NEIL3-202ENST00000513321 NBPF15Q8N660 670 aa27.19■■□□□ 1.94
NEIL3-202ENST00000513321 ARHGEF1Q92888 912 aaKnown RBP27.19■■□□□ 1.94
NEIL3-202ENST00000513321 ADRA2BP18089 450 aa27.18■■□□□ 1.94
NEIL3-202ENST00000513321 EIF5P55010 431 aaKnown RBP27.18■■□□□ 1.94
NEIL3-202ENST00000513321 IL6STP40189 918 aaPredicted RBP27.17■■□□□ 1.94
NEIL3-202ENST00000513321 UBR3Q6ZT12 1888 aa27.17■■□□□ 1.94
NEIL3-202ENST00000513321 TWISTNBQ3B726 338 aaPredicted RBP27.16■■□□□ 1.94
NEIL3-202ENST00000513321 HDGFL1Q5TGJ6 251 aa27.16■■□□□ 1.94
NEIL3-202ENST00000513321 TRMT2AQ8IZ69 625 aaKnown RBP27.16■■□□□ 1.94
NEIL3-202ENST00000513321 ZNF330Q9Y3S2 320 aaPredicted RBP27.16■■□□□ 1.94
NEIL3-202ENST00000513321 ZBED9Q6R2W3 1325 aa27.16■■□□□ 1.94
NEIL3-202ENST00000513321 TUBGCP6Q96RT7 1819 aa27.15■■□□□ 1.94
NEIL3-202ENST00000513321 RFC4P35249 363 aa27.15■■□□□ 1.94
NEIL3-202ENST00000513321 NPM2Q86SE8 214 aaKnown RBP27.14■■□□□ 1.94
NEIL3-202ENST00000513321 ERBB4Q15303 1308 aa27.14■■□□□ 1.93
NEIL3-202ENST00000513321 LAMB4A4D0S4 1761 aa27.13■■□□□ 1.93
NEIL3-202ENST00000513321 MYL6BP14649 208 aa27.13■■□□□ 1.93
NEIL3-202ENST00000513321 PDIA6Q15084 440 aa27.13■■□□□ 1.93
NEIL3-202ENST00000513321 QSER1Q2KHR3 1735 aa27.13■■□□□ 1.93
NEIL3-202ENST00000513321 COL15A1P39059 1388 aa27.13■■□□□ 1.93
NEIL3-202ENST00000513321 SLC16A10Q8TF71 515 aa27.12■■□□□ 1.93
NEIL3-202ENST00000513321 A0A087WZG4 1122 aa27.11■■□□□ 1.93
NEIL3-202ENST00000513321 VAMP4O75379 141 aa27.11■■□□□ 1.93
NEIL3-202ENST00000513321 ZBTB7AO95365 584 aa27.11■■□□□ 1.93
NEIL3-202ENST00000513321 ARXQ96QS3 562 aa27.11■■□□□ 1.93
NEIL3-202ENST00000513321 CHMP4AQ9BY43 222 aa27.11■■□□□ 1.93
NEIL3-202ENST00000513321 CHPF2Q9P2E5 772 aa27.11■■□□□ 1.93
NEIL3-202ENST00000513321 ANXA1P04083 346 aa27.11■■□□□ 1.93
NEIL3-202ENST00000513321 PROSER3Q2NL68 480 aa27.11■■□□□ 1.93
NEIL3-202ENST00000513321 DDX21Q9NR30 783 aaKnown RBP eCLIP27.11■■□□□ 1.93
NEIL3-202ENST00000513321 CCDC30Q5VVM6 783 aa27.1■■□□□ 1.93
NEIL3-202ENST00000513321 DBF4Q9UBU7 674 aaPredicted RBP27.1■■□□□ 1.93
NEIL3-202ENST00000513321 SRP68Q9UHB9 627 aaKnown RBP27.1■■□□□ 1.93
NEIL3-202ENST00000513321 TBC1D2BQ9UPU7 963 aa27.1■■□□□ 1.93
NEIL3-202ENST00000513321 ZPR1O75312 459 aa27.08■■□□□ 1.93
NEIL3-202ENST00000513321 MTFR1LQ9H019 292 aa27.08■■□□□ 1.93
NEIL3-202ENST00000513321 NARFQ9UHQ1 456 aa27.08■■□□□ 1.93
NEIL3-202ENST00000513321 ATF5Q9Y2D1 282 aaPredicted RBP27.08■■□□□ 1.93
NEIL3-202ENST00000513321 CASZ1Q86V15 1759 aa27.08■■□□□ 1.93
NEIL3-202ENST00000513321 USP42Q9H9J4 1324 aaKnown RBP27.07■■□□□ 1.92
NEIL3-202ENST00000513321 LRP10Q7Z4F1 713 aa27.07■■□□□ 1.92
NEIL3-202ENST00000513321 DZIP3Q86Y13 1208 aaKnown RBP27.07■■□□□ 1.92
NEIL3-202ENST00000513321 TCERG1O14776 1098 aaKnown RBP27.06■■□□□ 1.92
NEIL3-202ENST00000513321 YTHDC1Q96MU7 727 aaKnown RBP27.06■■□□□ 1.92
NEIL3-202ENST00000513321 USPL1Q5W0Q7 1092 aa27.06■■□□□ 1.92
NEIL3-202ENST00000513321 MSL1Q68DK7 614 aa27.06■■□□□ 1.92
NEIL3-202ENST00000513321 GYS1P13807 737 aa27.05■■□□□ 1.92
NEIL3-202ENST00000513321 HYPKQ9NX55 129 aa27.05■■□□□ 1.92
NEIL3-202ENST00000513321 TTLL7Q6ZT98 887 aa27.04■■□□□ 1.92
NEIL3-202ENST00000513321 STK31Q9BXU1 1019 aa27.04■■□□□ 1.92
NEIL3-202ENST00000513321 COPS6Q7L5N1 327 aa27.03■■□□□ 1.92
NEIL3-202ENST00000513321 SPON1Q9HCB6 807 aa27.03■■□□□ 1.92
NEIL3-202ENST00000513321 CAMTA2O94983 1202 aa27.02■■□□□ 1.92
NEIL3-202ENST00000513321 AIMP1Q12904 312 aaKnown RBP27.02■■□□□ 1.92
NEIL3-202ENST00000513321 NLGN1Q8N2Q7 840 aa27.02■■□□□ 1.92
NEIL3-202ENST00000513321 XAGE3Q8WTP9 111 aa27.02■■□□□ 1.92
NEIL3-202ENST00000513321 FKBP8Q14318 412 aa27.01■■□□□ 1.91
NEIL3-202ENST00000513321 BCL2L12Q9HB09 334 aa27.01■■□□□ 1.91
NEIL3-202ENST00000513321 C4AP0C0L4 1744 aa27.01■■□□□ 1.91
NEIL3-202ENST00000513321 SLC4A2P04920 1241 aa27■■□□□ 1.91
NEIL3-202ENST00000513321 KIF6Q6ZMV9 814 aa27■■□□□ 1.91
NEIL3-202ENST00000513321 PHAXQ9H814 394 aaKnown RBP27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms