RNA–Protein interactions for RNA: ENST00000513161.1

NECAP2-212, Transcript of NECAP endocytosis associated 2, humanhuman

TSL 5

Gene NECAP2, Length 713 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP2-212ENST00000513161 CCDC146Q8IYE0 955 aa17.1■□□□□ 0.33
NECAP2-212ENST00000513161 NLGN2Q8NFZ4 835 aa17.1■□□□□ 0.33
NECAP2-212ENST00000513161 MIS18AQ9NYP9 233 aa17.1■□□□□ 0.33
NECAP2-212ENST00000513161 SRP68Q9UHB9 627 aaKnown RBP17.1■□□□□ 0.33
NECAP2-212ENST00000513161 ZBTB1Q9Y2K1 713 aa17.1■□□□□ 0.33
NECAP2-212ENST00000513161 THUMPD2Q9BTF0 503 aaKnown RBP17.09■□□□□ 0.33
NECAP2-212ENST00000513161 SIPA1L3O60292 1781 aaPredicted RBP17.09■□□□□ 0.33
NECAP2-212ENST00000513161 DLG5Q8TDM6 1919 aa17.09■□□□□ 0.33
NECAP2-212ENST00000513161 UBR2Q8IWV8 1755 aa17.08■□□□□ 0.33
NECAP2-212ENST00000513161 SOS1Q07889 1333 aaPredicted RBP17.08■□□□□ 0.32
NECAP2-212ENST00000513161 NEUROD2Q15784 382 aa17.08■□□□□ 0.32
NECAP2-212ENST00000513161 PNISRQ8TF01 805 aaKnown RBP17.08■□□□□ 0.32
NECAP2-212ENST00000513161 PARP3Q9Y6F1 533 aa17.08■□□□□ 0.32
NECAP2-212ENST00000513161 USP42Q9H9J4 1324 aaKnown RBP17.07■□□□□ 0.32
NECAP2-212ENST00000513161 SNRPA1P09661 255 aaKnown RBP17.07■□□□□ 0.32
NECAP2-212ENST00000513161 USPL1Q5W0Q7 1092 aa17.07■□□□□ 0.32
NECAP2-212ENST00000513161 ADAMTS8Q9UP79 889 aa17.07■□□□□ 0.32
NECAP2-212ENST00000513161 RRP7AQ9Y3A4 280 aaKnown RBP17.07■□□□□ 0.32
NECAP2-212ENST00000513161 A1BGP04217 495 aa17.06■□□□□ 0.32
NECAP2-212ENST00000513161 TMPOP42166 694 aaKnown RBP17.06■□□□□ 0.32
NECAP2-212ENST00000513161 FKBP8Q14318 412 aa17.06■□□□□ 0.32
NECAP2-212ENST00000513161 RUNDC1Q96C34 613 aa17.06■□□□□ 0.32
NECAP2-212ENST00000513161 CICQ96RK0 1608 aaPredicted RBP17.06■□□□□ 0.32
NECAP2-212ENST00000513161 COL15A1P39059 1388 aa17.05■□□□□ 0.32
NECAP2-212ENST00000513161 A0A087WZG4 1122 aa17.05■□□□□ 0.32
NECAP2-212ENST00000513161 YY1P25490 414 aa17.05■□□□□ 0.32
NECAP2-212ENST00000513161 LMOD3Q0VAK6 560 aa17.05■□□□□ 0.32
NECAP2-212ENST00000513161 NARFQ9UHQ1 456 aa17.05■□□□□ 0.32
NECAP2-212ENST00000513161 USP16Q9Y5T5 823 aa17.05■□□□□ 0.32
NECAP2-212ENST00000513161 ANP32CO43423 234 aa17.04■□□□□ 0.32
NECAP2-212ENST00000513161 C4AP0C0L4 1744 aa17.04■□□□□ 0.32
NECAP2-212ENST00000513161 PRAMEF22A3QJZ6 481 aa17.03■□□□□ 0.32
NECAP2-212ENST00000513161 IL6STP40189 918 aaPredicted RBP17.03■□□□□ 0.32
NECAP2-212ENST00000513161 EIF5P55010 431 aaKnown RBP17.03■□□□□ 0.32
NECAP2-212ENST00000513161 WWC3Q9ULE0 1092 aa17.03■□□□□ 0.32
NECAP2-212ENST00000513161 TBC1D2BQ9UPU7 963 aa17.03■□□□□ 0.32
NECAP2-212ENST00000513161 TSPYL4Q9UJ04 414 aa17.02■□□□□ 0.32
NECAP2-212ENST00000513161 GRIN3BO60391 1043 aa17.01■□□□□ 0.31
NECAP2-212ENST00000513161 PIP4K2AP48426 406 aaPredicted RBP17.01■□□□□ 0.31
NECAP2-212ENST00000513161 BICDL1Q6ZP65 573 aa17.01■□□□□ 0.31
NECAP2-212ENST00000513161 LAS1LQ9Y4W2 734 aaKnown RBP17■□□□□ 0.31
NECAP2-212ENST00000513161 A0A0G2JLW4 131 aa16.99■□□□□ 0.31
NECAP2-212ENST00000513161 YBX3P16989 372 aaKnown RBP eCLIP16.99■□□□□ 0.31
NECAP2-212ENST00000513161 TM4SF1P30408 202 aa16.99■□□□□ 0.31
NECAP2-212ENST00000513161 EIF4A1P60842 406 aaKnown RBP16.99■□□□□ 0.31
NECAP2-212ENST00000513161 TGFB2P61812 414 aa16.99■□□□□ 0.31
NECAP2-212ENST00000513161 DDR1Q08345 913 aa16.99■□□□□ 0.31
NECAP2-212ENST00000513161 NFIXQ14938 502 aa16.99■□□□□ 0.31
NECAP2-212ENST00000513161 GIGYF1O75420 1035 aaPredicted RBP16.98■□□□□ 0.31
NECAP2-212ENST00000513161 DZIP3Q86Y13 1208 aaKnown RBP16.98■□□□□ 0.31
NECAP2-212ENST00000513161 BCL2L12Q9HB09 334 aa16.98■□□□□ 0.31
NECAP2-212ENST00000513161 POLRMTO00411 1230 aaKnown RBP16.97■□□□□ 0.31
NECAP2-212ENST00000513161 APAF1O14727 1248 aa16.97■□□□□ 0.31
NECAP2-212ENST00000513161 CCDC184Q52MB2 194 aa16.97■□□□□ 0.31
NECAP2-212ENST00000513161 NGEFQ8N5V2 710 aa16.97■□□□□ 0.31
NECAP2-212ENST00000513161 NPHP1O15259 732 aa16.96■□□□□ 0.31
NECAP2-212ENST00000513161 SERPINB2P05120 415 aa16.96■□□□□ 0.31
NECAP2-212ENST00000513161 MRS2Q9HD23 443 aa16.96■□□□□ 0.31
NECAP2-212ENST00000513161 BABAM1Q9NWV8 329 aa16.96■□□□□ 0.31
NECAP2-212ENST00000513161 TRIM35Q9UPQ4 493 aa16.96■□□□□ 0.31
NECAP2-212ENST00000513161 NBPF26B4DH59 902 aa16.95■□□□□ 0.3
NECAP2-212ENST00000513161 DPEP1P16444 411 aa16.95■□□□□ 0.3
NECAP2-212ENST00000513161 TBC1D9BQ66K14 1250 aa16.95■□□□□ 0.3
NECAP2-212ENST00000513161 NBPF10Q6P3W6 841 aaKnown RBP16.95■□□□□ 0.3
NECAP2-212ENST00000513161 NBPF15Q8N660 670 aa16.95■□□□□ 0.3
NECAP2-212ENST00000513161 SETDB2Q96T68 719 aa16.95■□□□□ 0.3
NECAP2-212ENST00000513161 CHD4Q14839 1912 aa16.95■□□□□ 0.3
NECAP2-212ENST00000513161 CAMTA2O94983 1202 aa16.94■□□□□ 0.3
NECAP2-212ENST00000513161 MYL6BP14649 208 aa16.94■□□□□ 0.3
NECAP2-212ENST00000513161 EIF2S2P20042 333 aaKnown RBP16.94■□□□□ 0.3
NECAP2-212ENST00000513161 BCS1LQ9Y276 419 aa16.94■□□□□ 0.3
NECAP2-212ENST00000513161 ZNF652Q9Y2D9 606 aa16.94■□□□□ 0.3
NECAP2-212ENST00000513161 C10orf71Q711Q0 1435 aa16.94■□□□□ 0.3
NECAP2-212ENST00000513161 KDM3BQ7LBC6 1761 aa16.93■□□□□ 0.3
NECAP2-212ENST00000513161 UTRNP46939 3433 aa16.93■□□□□ 0.3
NECAP2-212ENST00000513161 N4BP2Q86UW6 1770 aaPredicted RBP16.92■□□□□ 0.3
NECAP2-212ENST00000513161 PIM2Q9P1W9 311 aa16.92■□□□□ 0.3
NECAP2-212ENST00000513161 GOLGB1Q14789 3259 aaKnown RBP16.92■□□□□ 0.3
NECAP2-212ENST00000513161 KIF13BQ9NQT8 1826 aa16.91■□□□□ 0.3
NECAP2-212ENST00000513161 SENP3-EIF4A1A0A087X0R7 540 aa16.91■□□□□ 0.3
NECAP2-212ENST00000513161 CHL1O00533 1208 aa16.91■□□□□ 0.3
NECAP2-212ENST00000513161 CHRNA5P30532 468 aa16.91■□□□□ 0.3
NECAP2-212ENST00000513161 PXDNLA1KZ92 1463 aa16.91■□□□□ 0.3
NECAP2-212ENST00000513161 CALD1Q05682 793 aaKnown RBP16.9■□□□□ 0.3
NECAP2-212ENST00000513161 CLEC4GQ6UXB4 293 aa16.9■□□□□ 0.3
NECAP2-212ENST00000513161 KIF6Q6ZMV9 814 aa16.9■□□□□ 0.3
NECAP2-212ENST00000513161 NECTIN2Q92692 538 aa16.9■□□□□ 0.3
NECAP2-212ENST00000513161 CARMIL3Q8ND23 1372 aa16.89■□□□□ 0.3
NECAP2-212ENST00000513161 AFDNP55196 1824 aaKnown RBP16.89■□□□□ 0.29
NECAP2-212ENST00000513161 ARHGAP27Q6ZUM4 889 aa16.89■□□□□ 0.29
NECAP2-212ENST00000513161 CCDC24Q8N4L8 307 aa16.89■□□□□ 0.29
NECAP2-212ENST00000513161 NIP7Q9Y221 180 aaKnown RBP eCLIP16.89■□□□□ 0.29
NECAP2-212ENST00000513161 LAMB4A4D0S4 1761 aa16.88■□□□□ 0.29
NECAP2-212ENST00000513161 FAM177BA6PVY3 158 aa16.88■□□□□ 0.29
NECAP2-212ENST00000513161 H0YIN7 160 aa16.88■□□□□ 0.29
NECAP2-212ENST00000513161 KCNA3P22001 575 aa16.88■□□□□ 0.29
NECAP2-212ENST00000513161 DALRD3Q5D0E6 543 aaKnown RBP16.88■□□□□ 0.29
NECAP2-212ENST00000513161 C2CD5Q86YS7 1000 aa16.88■□□□□ 0.29
NECAP2-212ENST00000513161 CNBD1Q8NA66 436 aa16.88■□□□□ 0.29
NECAP2-212ENST00000513161 CFAP44Q96MT7 982 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms