RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 LAS1LQ9Y4W2 734 aaKnown RBP9.35□□□□□ -0.91
PDLIM5-215ENST00000511586 USP16Q9Y5T5 823 aa9.35□□□□□ -0.91
PDLIM5-215ENST00000511586 LRP5O75197 1615 aa9.34□□□□□ -0.91
PDLIM5-215ENST00000511586 CICQ96RK0 1608 aaPredicted RBP9.34□□□□□ -0.91
PDLIM5-215ENST00000511586 CHL1O00533 1208 aa9.34□□□□□ -0.91
PDLIM5-215ENST00000511586 A1BGP04217 495 aa9.34□□□□□ -0.91
PDLIM5-215ENST00000511586 CANXP27824 592 aaKnown RBP9.34□□□□□ -0.91
PDLIM5-215ENST00000511586 CCDC27Q2M243 656 aa9.34□□□□□ -0.91
PDLIM5-215ENST00000511586 NCBP3Q53F19 620 aaKnown RBP9.34□□□□□ -0.91
PDLIM5-215ENST00000511586 SGIP1Q9BQI5 828 aa9.34□□□□□ -0.91
PDLIM5-215ENST00000511586 ZBTB1Q9Y2K1 713 aa9.34□□□□□ -0.91
PDLIM5-215ENST00000511586 UBR2Q8IWV8 1755 aa9.34□□□□□ -0.91
PDLIM5-215ENST00000511586 COL5A3P25940 1745 aaPredicted RBP9.34□□□□□ -0.92
PDLIM5-215ENST00000511586 TJP1Q07157 1748 aa9.34□□□□□ -0.92
PDLIM5-215ENST00000511586 SOS1Q07889 1333 aaPredicted RBP9.33□□□□□ -0.92
PDLIM5-215ENST00000511586 PRAMEF22A3QJZ6 481 aa9.33□□□□□ -0.92
PDLIM5-215ENST00000511586 GIGYF1O75420 1035 aaPredicted RBP9.33□□□□□ -0.92
PDLIM5-215ENST00000511586 MSL1Q68DK7 614 aa9.33□□□□□ -0.92
PDLIM5-215ENST00000511586 NPM2Q86SE8 214 aaKnown RBP9.33□□□□□ -0.92
PDLIM5-215ENST00000511586 CFAP44Q96MT7 982 aa9.33□□□□□ -0.92
PDLIM5-215ENST00000511586 ARXQ96QS3 562 aa9.33□□□□□ -0.92
PDLIM5-215ENST00000511586 TUBGCP6Q96RT7 1819 aa9.33□□□□□ -0.92
PDLIM5-215ENST00000511586 UBR3Q6ZT12 1888 aa9.32□□□□□ -0.92
PDLIM5-215ENST00000511586 A0A087WZG4 1122 aa9.32□□□□□ -0.92
PDLIM5-215ENST00000511586 SENP3-EIF4A1A0A087X0R7 540 aa9.32□□□□□ -0.92
PDLIM5-215ENST00000511586 ZPR1O75312 459 aa9.32□□□□□ -0.92
PDLIM5-215ENST00000511586 GYS1P13807 737 aa9.32□□□□□ -0.92
PDLIM5-215ENST00000511586 IL6STP40189 918 aaPredicted RBP9.32□□□□□ -0.92
PDLIM5-215ENST00000511586 EIF5P55010 431 aaKnown RBP9.32□□□□□ -0.92
PDLIM5-215ENST00000511586 WWC1Q8IX03 1113 aa9.32□□□□□ -0.92
PDLIM5-215ENST00000511586 NLGN1Q8N2Q7 840 aa9.32□□□□□ -0.92
PDLIM5-215ENST00000511586 NGEFQ8N5V2 710 aa9.32□□□□□ -0.92
PDLIM5-215ENST00000511586 IFT57Q9NWB7 429 aa9.32□□□□□ -0.92
PDLIM5-215ENST00000511586 SRCAPQ6ZRS2 3230 aa9.32□□□□□ -0.92
PDLIM5-215ENST00000511586 USP42Q9H9J4 1324 aaKnown RBP9.31□□□□□ -0.92
PDLIM5-215ENST00000511586 ZNF853P0CG23 659 aa9.31□□□□□ -0.92
PDLIM5-215ENST00000511586 GNAI1P63096 354 aa9.31□□□□□ -0.92
PDLIM5-215ENST00000511586 MIER1Q8N108 512 aa9.31□□□□□ -0.92
PDLIM5-215ENST00000511586 SRP68Q9UHB9 627 aaKnown RBP9.31□□□□□ -0.92
PDLIM5-215ENST00000511586 NARFQ9UHQ1 456 aa9.31□□□□□ -0.92
PDLIM5-215ENST00000511586 ZNF330Q9Y3S2 320 aaPredicted RBP9.31□□□□□ -0.92
PDLIM5-215ENST00000511586 SALL2Q9Y467 1007 aaPredicted RBP9.31□□□□□ -0.92
PDLIM5-215ENST00000511586 COL15A1P39059 1388 aa9.31□□□□□ -0.92
PDLIM5-215ENST00000511586 MYH14Q7Z406 1995 aaKnown RBP9.31□□□□□ -0.92
PDLIM5-215ENST00000511586 USPL1Q5W0Q7 1092 aa9.3□□□□□ -0.92
PDLIM5-215ENST00000511586 MBIPQ9NS73 344 aa9.3□□□□□ -0.92
PDLIM5-215ENST00000511586 IL16Q14005 1332 aa9.3□□□□□ -0.92
PDLIM5-215ENST00000511586 KDM3BQ7LBC6 1761 aa9.29□□□□□ -0.92
PDLIM5-215ENST00000511586 NBPF26B4DH59 902 aa9.29□□□□□ -0.92
PDLIM5-215ENST00000511586 MMP10P09238 476 aa9.29□□□□□ -0.92
PDLIM5-215ENST00000511586 EIF2S2P20042 333 aaKnown RBP9.29□□□□□ -0.92
PDLIM5-215ENST00000511586 PIP4K2AP48426 406 aaPredicted RBP9.29□□□□□ -0.92
PDLIM5-215ENST00000511586 FKBP8Q14318 412 aa9.29□□□□□ -0.92
PDLIM5-215ENST00000511586 NBPF10Q6P3W6 841 aaKnown RBP9.29□□□□□ -0.92
PDLIM5-215ENST00000511586 WDR63Q8IWG1 891 aa9.29□□□□□ -0.92
PDLIM5-215ENST00000511586 NBPF15Q8N660 670 aa9.29□□□□□ -0.92
PDLIM5-215ENST00000511586 FHDC1Q9C0D6 1143 aaPredicted RBP9.29□□□□□ -0.92
PDLIM5-215ENST00000511586 TBC1D2BQ9UPU7 963 aa9.29□□□□□ -0.92
PDLIM5-215ENST00000511586 ERBB4Q15303 1308 aa9.29□□□□□ -0.92
PDLIM5-215ENST00000511586 HOXB7P09629 217 aa9.28□□□□□ -0.92
PDLIM5-215ENST00000511586 KRT24Q2M2I5 525 aa9.28□□□□□ -0.92
PDLIM5-215ENST00000511586 DZIP3Q86Y13 1208 aaKnown RBP9.28□□□□□ -0.92
PDLIM5-215ENST00000511586 SYT17Q9BSW7 474 aa9.28□□□□□ -0.92
PDLIM5-215ENST00000511586 PARP3Q9Y6F1 533 aa9.28□□□□□ -0.92
PDLIM5-215ENST00000511586 COL24A1Q17RW2 1714 aa9.28□□□□□ -0.92
PDLIM5-215ENST00000511586 MYL6BP14649 208 aa9.27□□□□□ -0.93
PDLIM5-215ENST00000511586 TM4SF1P30408 202 aa9.27□□□□□ -0.93
PDLIM5-215ENST00000511586 DUSP27Q5VZP5 1158 aa9.27□□□□□ -0.93
PDLIM5-215ENST00000511586 KLHL34Q8N239 644 aa9.27□□□□□ -0.93
PDLIM5-215ENST00000511586 CHMP4AQ9BY43 222 aa9.27□□□□□ -0.93
PDLIM5-215ENST00000511586 BCL2L12Q9HB09 334 aa9.27□□□□□ -0.93
PDLIM5-215ENST00000511586 CD2APQ9Y5K6 639 aa9.27□□□□□ -0.93
PDLIM5-215ENST00000511586 RGL2O15211 777 aa9.26□□□□□ -0.93
PDLIM5-215ENST00000511586 CAMTA2O94983 1202 aa9.26□□□□□ -0.93
PDLIM5-215ENST00000511586 NFIXQ14938 502 aa9.26□□□□□ -0.93
PDLIM5-215ENST00000511586 HDGFL1Q5TGJ6 251 aa9.26□□□□□ -0.93
PDLIM5-215ENST00000511586 CLEC4GQ6UXB4 293 aa9.26□□□□□ -0.93
PDLIM5-215ENST00000511586 NECTIN2Q92692 538 aa9.26□□□□□ -0.93
PDLIM5-215ENST00000511586 TSR2Q969E8 191 aaKnown RBP9.26□□□□□ -0.93
PDLIM5-215ENST00000511586 ZNF652Q9Y2D9 606 aa9.26□□□□□ -0.93
PDLIM5-215ENST00000511586 C4AP0C0L4 1744 aa9.25□□□□□ -0.93
PDLIM5-215ENST00000511586 ERVV-1B6SEH8 477 aa9.25□□□□□ -0.93
PDLIM5-215ENST00000511586 POLRMTO00411 1230 aaKnown RBP9.25□□□□□ -0.93
PDLIM5-215ENST00000511586 ELL2O00472 640 aaPredicted RBP9.25□□□□□ -0.93
PDLIM5-215ENST00000511586 DDR1Q08345 913 aa9.25□□□□□ -0.93
PDLIM5-215ENST00000511586 GOLGA2Q08379 1002 aa9.25□□□□□ -0.93
PDLIM5-215ENST00000511586 PDIA6Q15084 440 aa9.25□□□□□ -0.93
PDLIM5-215ENST00000511586 KIF6Q6ZMV9 814 aa9.25□□□□□ -0.93
PDLIM5-215ENST00000511586 C8orf58Q8NAV2 365 aa9.25□□□□□ -0.93
PDLIM5-215ENST00000511586 SETDB2Q96T68 719 aa9.25□□□□□ -0.93
PDLIM5-215ENST00000511586 MYH16Q9H6N6 1097 aa9.25□□□□□ -0.93
PDLIM5-215ENST00000511586 DDX21Q9NR30 783 aaKnown RBP eCLIP9.25□□□□□ -0.93
PDLIM5-215ENST00000511586 DBF4Q9UBU7 674 aaPredicted RBP9.25□□□□□ -0.93
PDLIM5-215ENST00000511586 DCAF8L1A6NGE4 600 aa9.24□□□□□ -0.93
PDLIM5-215ENST00000511586 PROSER3Q2NL68 480 aa9.24□□□□□ -0.93
PDLIM5-215ENST00000511586 TBC1D9BQ66K14 1250 aa9.24□□□□□ -0.93
PDLIM5-215ENST00000511586 BICDL1Q6ZP65 573 aa9.24□□□□□ -0.93
PDLIM5-215ENST00000511586 LRP10Q7Z4F1 713 aa9.24□□□□□ -0.93
PDLIM5-215ENST00000511586 TSPYL6Q8N831 410 aa9.24□□□□□ -0.93
PDLIM5-215ENST00000511586 CHPF2Q9P2E5 772 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms