RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 HIRAP54198 1017 aaPredicted RBP12.97□□□□□ -0.33
TRAPPC11-206ENST00000509857 TBCELQ5QJ74 424 aa12.97□□□□□ -0.33
TRAPPC11-206ENST00000509857 CABP1Q9NZU7 370 aa12.97□□□□□ -0.33
TRAPPC11-206ENST00000509857 NXF1Q9UBU9 619 aaKnown RBP12.97□□□□□ -0.33
TRAPPC11-206ENST00000509857 USTQ9Y2C2 406 aa12.97□□□□□ -0.33
TRAPPC11-206ENST00000509857 ATAD2Q6PL18 1390 aa12.96□□□□□ -0.33
TRAPPC11-206ENST00000509857 EML1O00423 815 aa12.95□□□□□ -0.34
TRAPPC11-206ENST00000509857 PPFIA3O75145 1194 aa12.95□□□□□ -0.34
TRAPPC11-206ENST00000509857 NOS2P35228 1153 aa12.95□□□□□ -0.34
TRAPPC11-206ENST00000509857 OCLNQ16625 522 aa12.95□□□□□ -0.34
TRAPPC11-206ENST00000509857 SCG3Q8WXD2 468 aaKnown RBP12.95□□□□□ -0.34
TRAPPC11-206ENST00000509857 SERTM1A2A2V5 107 aa12.94□□□□□ -0.34
TRAPPC11-206ENST00000509857 PPP1R12BO60237 982 aaPredicted RBP12.94□□□□□ -0.34
TRAPPC11-206ENST00000509857 C1orf216Q8TAB5 229 aa12.94□□□□□ -0.34
TRAPPC11-206ENST00000509857 L3MBTL2Q969R5 705 aa12.94□□□□□ -0.34
TRAPPC11-206ENST00000509857 C2orf49Q9BVC5 232 aaPredicted RBP12.94□□□□□ -0.34
TRAPPC11-206ENST00000509857 ZDHHC3Q9NYG2 299 aa12.94□□□□□ -0.34
TRAPPC11-206ENST00000509857 SLAIN2Q9P270 581 aa12.94□□□□□ -0.34
TRAPPC11-206ENST00000509857 LGR5O75473 907 aa12.93□□□□□ -0.34
TRAPPC11-206ENST00000509857 H3BM21 787 aa12.92□□□□□ -0.34
TRAPPC11-206ENST00000509857 FOXO3O43524 673 aa12.92□□□□□ -0.34
TRAPPC11-206ENST00000509857 F11P03951 625 aa12.92□□□□□ -0.34
TRAPPC11-206ENST00000509857 ATP4AP20648 1035 aa12.92□□□□□ -0.34
TRAPPC11-206ENST00000509857 ITGA6P23229 1130 aa12.92□□□□□ -0.34
TRAPPC11-206ENST00000509857 NBPF1Q3BBV0 1214 aa12.92□□□□□ -0.34
TRAPPC11-206ENST00000509857 TERTO14746 1132 aaKnown RBP12.91□□□□□ -0.34
TRAPPC11-206ENST00000509857 MSX1P28360 303 aa12.91□□□□□ -0.34
TRAPPC11-206ENST00000509857 RETREG2Q8NC44 543 aa12.91□□□□□ -0.34
TRAPPC11-206ENST00000509857 CHMP3Q9Y3E7 222 aa12.91□□□□□ -0.34
TRAPPC11-206ENST00000509857 PARP3Q9Y6F1 533 aa12.91□□□□□ -0.34
TRAPPC11-206ENST00000509857 SH3PXD2AQ5TCZ1 1133 aa12.9□□□□□ -0.34
TRAPPC11-206ENST00000509857 PRMT3O60678 531 aa12.89□□□□□ -0.35
TRAPPC11-206ENST00000509857 PRIMPOLQ96LW4 560 aa12.89□□□□□ -0.35
TRAPPC11-206ENST00000509857 CRISPLD1Q9H336 500 aa12.89□□□□□ -0.35
TRAPPC11-206ENST00000509857 CXXC1Q9P0U4 656 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC11-206ENST00000509857 ZNF232Q9UNY5 417 aa12.89□□□□□ -0.35
TRAPPC11-206ENST00000509857 TXLNAP40222 546 aa12.88□□□□□ -0.35
TRAPPC11-206ENST00000509857 TRIM22Q8IYM9 498 aa12.88□□□□□ -0.35
TRAPPC11-206ENST00000509857 NANOS1Q8WY41 292 aaKnown RBP12.88□□□□□ -0.35
TRAPPC11-206ENST00000509857 GMCL1Q96IK5 515 aa12.88□□□□□ -0.35
TRAPPC11-206ENST00000509857 GAS2L1Q99501 681 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC11-206ENST00000509857 CUEDC1Q9NWM3 386 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC11-206ENST00000509857 VSIG8P0DPA2 414 aa12.87□□□□□ -0.35
TRAPPC11-206ENST00000509857 FKBP5Q13451 457 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC11-206ENST00000509857 C1orf53Q5VUE5 145 aa12.87□□□□□ -0.35
TRAPPC11-206ENST00000509857 ZNF775Q96BV0 537 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC11-206ENST00000509857 TATP17735 454 aaPredicted RBP12.86□□□□□ -0.35
TRAPPC11-206ENST00000509857 NFX1Q12986 1120 aaKnown RBP12.86□□□□□ -0.35
TRAPPC11-206ENST00000509857 LBRQ14739 615 aaKnown RBP12.86□□□□□ -0.35
TRAPPC11-206ENST00000509857 CHMP7Q8WUX9 453 aaPredicted RBP12.86□□□□□ -0.35
TRAPPC11-206ENST00000509857 C7orf43Q8WVR3 580 aa12.86□□□□□ -0.35
TRAPPC11-206ENST00000509857 AIDAQ96BJ3 306 aa12.86□□□□□ -0.35
TRAPPC11-206ENST00000509857 GPAMQ9HCL2 828 aa12.86□□□□□ -0.35
TRAPPC11-206ENST00000509857 GPC6Q9Y625 555 aaPredicted RBP12.86□□□□□ -0.35
TRAPPC11-206ENST00000509857 ATP2B4P23634 1241 aa12.85□□□□□ -0.35
TRAPPC11-206ENST00000509857 VEGFBP49765 207 aa12.85□□□□□ -0.35
TRAPPC11-206ENST00000509857 PDE4CQ08493 712 aa12.85□□□□□ -0.35
TRAPPC11-206ENST00000509857 H7C1W4 665 aa12.84□□□□□ -0.35
TRAPPC11-206ENST00000509857 RIPOR1Q6ZS17 1223 aa12.84□□□□□ -0.35
TRAPPC11-206ENST00000509857 COL26A1Q96A83 441 aa12.84□□□□□ -0.35
TRAPPC11-206ENST00000509857 CARNS1A5YM72 827 aa12.83□□□□□ -0.36
TRAPPC11-206ENST00000509857 THBS1P07996 1170 aa12.83□□□□□ -0.36
TRAPPC11-206ENST00000509857 DBN1Q16643 649 aa12.83□□□□□ -0.36
TRAPPC11-206ENST00000509857 SLC16A10Q8TF71 515 aa12.83□□□□□ -0.36
TRAPPC11-206ENST00000509857 ZNF837Q96EG3 531 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC11-206ENST00000509857 PHACTR1Q9C0D0 580 aa12.83□□□□□ -0.36
TRAPPC11-206ENST00000509857 SSFA2P28290 1259 aa12.82□□□□□ -0.36
TRAPPC11-206ENST00000509857 ALDH16A1Q8IZ83 802 aa12.82□□□□□ -0.36
TRAPPC11-206ENST00000509857 PGBD3Q8N328 593 aa12.82□□□□□ -0.36
TRAPPC11-206ENST00000509857 RUBCNLQ9H714 662 aa12.82□□□□□ -0.36
TRAPPC11-206ENST00000509857 HCN4Q9Y3Q4 1203 aa12.82□□□□□ -0.36
TRAPPC11-206ENST00000509857 ZIC5Q96T25 663 aa12.81□□□□□ -0.36
TRAPPC11-206ENST00000509857 NUCKS1Q9H1E3 243 aaKnown RBP12.81□□□□□ -0.36
TRAPPC11-206ENST00000509857 UBAP2LQ14157 1087 aaKnown RBP12.8□□□□□ -0.36
TRAPPC11-206ENST00000509857 RTN1Q16799 776 aa12.8□□□□□ -0.36
TRAPPC11-206ENST00000509857 NLRP8Q86W28 1048 aa12.8□□□□□ -0.36
TRAPPC11-206ENST00000509857 A0A1W2PNR3 127 aa12.79□□□□□ -0.36
TRAPPC11-206ENST00000509857 EFHC2Q5JST6 749 aa12.79□□□□□ -0.36
TRAPPC11-206ENST00000509857 VWA5B2Q8N398 1253 aa12.79□□□□□ -0.36
TRAPPC11-206ENST00000509857 VTI1AQ96AJ9 217 aa12.79□□□□□ -0.36
TRAPPC11-206ENST00000509857 MYO19Q96H55 970 aa12.79□□□□□ -0.36
TRAPPC11-206ENST00000509857 QTRT2Q9H974 415 aaKnown RBP12.79□□□□□ -0.36
TRAPPC11-206ENST00000509857 ERBB4Q15303 1308 aa12.79□□□□□ -0.36
TRAPPC11-206ENST00000509857 PTCD1O75127 700 aaKnown RBP12.78□□□□□ -0.36
TRAPPC11-206ENST00000509857 ARSJQ5FYB0 599 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC11-206ENST00000509857 LCE2AQ5TA79 106 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC11-206ENST00000509857 LCE2CQ5TA81 110 aa12.78□□□□□ -0.36
TRAPPC11-206ENST00000509857 PHLDB3Q6NSJ2 640 aa12.78□□□□□ -0.36
TRAPPC11-206ENST00000509857 TREML4Q6UXN2 200 aa12.78□□□□□ -0.36
TRAPPC11-206ENST00000509857 SV2AQ7L0J3 742 aa12.78□□□□□ -0.36
TRAPPC11-206ENST00000509857 RHPN1Q8TCX5 695 aa12.78□□□□□ -0.36
TRAPPC11-206ENST00000509857 IRF7Q92985 503 aa12.78□□□□□ -0.36
TRAPPC11-206ENST00000509857 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.78□□□□□ -0.36
TRAPPC11-206ENST00000509857 CDC14CA4D256 554 aa12.77□□□□□ -0.37
TRAPPC11-206ENST00000509857 WFS1O76024 890 aa12.77□□□□□ -0.37
TRAPPC11-206ENST00000509857 B4GALNT3Q6L9W6 998 aa12.77□□□□□ -0.37
TRAPPC11-206ENST00000509857 BICDL1Q6ZP65 573 aa12.76□□□□□ -0.37
TRAPPC11-206ENST00000509857 NGLY1Q96IV0 654 aa12.76□□□□□ -0.37
TRAPPC11-206ENST00000509857 SAMD5Q5TGI4 173 aa12.75□□□□□ -0.37
TRAPPC11-206ENST00000509857 KLRG1Q96E93 195 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms