RNA–Protein interactions for RNA: ENST00000509712.5

CCDC30-213, Transcript of coiled-coil domain containing 30, humanhuman

TSL 2

Gene CCDC30, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-213ENST00000509712 HINFPQ9BQA5 517 aa6.85□□□□□ -1.31
CCDC30-213ENST00000509712 TSEN34Q9BSV6 310 aaKnown RBP6.85□□□□□ -1.31
CCDC30-213ENST00000509712 ZNF395Q9H8N7 513 aaPredicted RBP6.85□□□□□ -1.31
CCDC30-213ENST00000509712 DACH1Q9UI36 760 aa6.85□□□□□ -1.31
CCDC30-213ENST00000509712 CENPCQ03188 943 aa6.84□□□□□ -1.31
CCDC30-213ENST00000509712 TLR1Q15399 786 aa6.84□□□□□ -1.31
CCDC30-213ENST00000509712 TRIM46Q7Z4K8 759 aa6.84□□□□□ -1.31
CCDC30-213ENST00000509712 YTHDC1Q96MU7 727 aaKnown RBP6.84□□□□□ -1.31
CCDC30-213ENST00000509712 A0A0U1RQG5 324 aaPredicted RBP6.83□□□□□ -1.32
CCDC30-213ENST00000509712 FOXO3O43524 673 aa6.83□□□□□ -1.32
CCDC30-213ENST00000509712 GPC1P35052 558 aa6.83□□□□□ -1.32
CCDC30-213ENST00000509712 LCE2AQ5TA79 106 aaPredicted RBP6.83□□□□□ -1.32
CCDC30-213ENST00000509712 MRPL14Q6P1L8 145 aaKnown RBP6.83□□□□□ -1.32
CCDC30-213ENST00000509712 SLC9A9Q8IVB4 645 aa6.83□□□□□ -1.32
CCDC30-213ENST00000509712 GAS2L2Q8NHY3 880 aa6.83□□□□□ -1.32
CCDC30-213ENST00000509712 ATP13A2Q9NQ11 1180 aa6.83□□□□□ -1.32
CCDC30-213ENST00000509712 MEN1O00255 615 aa6.82□□□□□ -1.32
CCDC30-213ENST00000509712 CDK2AP1O14519 115 aa6.82□□□□□ -1.32
CCDC30-213ENST00000509712 RNF144AP50876 292 aaPredicted RBP6.82□□□□□ -1.32
CCDC30-213ENST00000509712 INSM1Q01101 510 aaPredicted RBP6.82□□□□□ -1.32
CCDC30-213ENST00000509712 CAPN12Q6ZSI9 719 aa6.82□□□□□ -1.32
CCDC30-213ENST00000509712 STAG2Q8N3U4 1231 aa6.82□□□□□ -1.32
CCDC30-213ENST00000509712 INSM2Q96T92 566 aaPredicted RBP6.82□□□□□ -1.32
CCDC30-213ENST00000509712 GRIP2Q9C0E4 1043 aa6.82□□□□□ -1.32
CCDC30-213ENST00000509712 IVNS1ABPQ9Y6Y0 642 aa6.82□□□□□ -1.32
CCDC30-213ENST00000509712 ATAD2Q6PL18 1390 aa6.82□□□□□ -1.32
CCDC30-213ENST00000509712 PATL2C9JE40 543 aaKnown RBP6.82□□□□□ -1.32
CCDC30-213ENST00000509712 CTSOP43234 321 aaPredicted RBP6.82□□□□□ -1.32
CCDC30-213ENST00000509712 TBCELQ5QJ74 424 aa6.82□□□□□ -1.32
CCDC30-213ENST00000509712 ZDHHC1Q8WTX9 485 aa6.82□□□□□ -1.32
CCDC30-213ENST00000509712 SCG3Q8WXD2 468 aaKnown RBP6.82□□□□□ -1.32
CCDC30-213ENST00000509712 COL26A1Q96A83 441 aa6.82□□□□□ -1.32
CCDC30-213ENST00000509712 ZBTB7CA1YPR0 619 aa6.81□□□□□ -1.32
CCDC30-213ENST00000509712 HIRAP54198 1017 aaPredicted RBP6.81□□□□□ -1.32
CCDC30-213ENST00000509712 PSMA6P60900 246 aaKnown RBP6.81□□□□□ -1.32
CCDC30-213ENST00000509712 RNF217Q8TC41 542 aa6.81□□□□□ -1.32
CCDC30-213ENST00000509712 C2orf49Q9BVC5 232 aaPredicted RBP6.81□□□□□ -1.32
CCDC30-213ENST00000509712 SHROOM4Q9ULL8 1493 aa6.8□□□□□ -1.32
CCDC30-213ENST00000509712 EML1O00423 815 aa6.8□□□□□ -1.32
CCDC30-213ENST00000509712 C6orf118Q5T5N4 469 aa6.8□□□□□ -1.32
CCDC30-213ENST00000509712 NLRP3Q96P20 1036 aa6.8□□□□□ -1.32
CCDC30-213ENST00000509712 UPP2O95045 317 aa6.79□□□□□ -1.32
CCDC30-213ENST00000509712 BMP2P12643 396 aa6.79□□□□□ -1.32
CCDC30-213ENST00000509712 ARID4AP29374 1257 aaPredicted RBP6.79□□□□□ -1.32
CCDC30-213ENST00000509712 SERPINB4P48594 390 aa6.79□□□□□ -1.32
CCDC30-213ENST00000509712 SCARF1Q14162 830 aa6.79□□□□□ -1.32
CCDC30-213ENST00000509712 TEAD4Q15561 434 aa6.79□□□□□ -1.32
CCDC30-213ENST00000509712 SH3PXD2AQ5TCZ1 1133 aa6.79□□□□□ -1.32
CCDC30-213ENST00000509712 NBPF15Q8N660 670 aa6.79□□□□□ -1.32
CCDC30-213ENST00000509712 RHBDD1Q8TEB9 315 aa6.79□□□□□ -1.32
CCDC30-213ENST00000509712 ZFP42Q96MM3 310 aa6.79□□□□□ -1.32
CCDC30-213ENST00000509712 ZSCAN10Q96SZ4 725 aaPredicted RBP6.79□□□□□ -1.32
CCDC30-213ENST00000509712 SEPT3Q9UH03 358 aa6.79□□□□□ -1.32
CCDC30-213ENST00000509712 SOS2Q07890 1332 aaPredicted RBP6.78□□□□□ -1.32
CCDC30-213ENST00000509712 FANCIQ9NVI1 1328 aa6.78□□□□□ -1.32
CCDC30-213ENST00000509712 SPATA31C2B4DYI2 1134 aa6.78□□□□□ -1.32
CCDC30-213ENST00000509712 PPP1R12BO60237 982 aaPredicted RBP6.78□□□□□ -1.32
CCDC30-213ENST00000509712 WFS1O76024 890 aa6.78□□□□□ -1.32
CCDC30-213ENST00000509712 MKNK1Q9BUB5 465 aa6.78□□□□□ -1.32
CCDC30-213ENST00000509712 GMPR2Q9P2T1 348 aaKnown RBP6.78□□□□□ -1.32
CCDC30-213ENST00000509712 CCER1Q8TC90 406 aaPredicted RBP6.78□□□□□ -1.32
CCDC30-213ENST00000509712 POLMQ9NP87 494 aaPredicted RBP6.78□□□□□ -1.32
CCDC30-213ENST00000509712 PTCD1O75127 700 aaKnown RBP6.77□□□□□ -1.33
CCDC30-213ENST00000509712 C4orf17Q53FE4 359 aa6.77□□□□□ -1.33
CCDC30-213ENST00000509712 QTRT2Q9H974 415 aaKnown RBP6.77□□□□□ -1.33
CCDC30-213ENST00000509712 NOS2P35228 1153 aa6.76□□□□□ -1.33
CCDC30-213ENST00000509712 IPO4Q8TEX9 1081 aaKnown RBP6.76□□□□□ -1.33
CCDC30-213ENST00000509712 CHMP7Q8WUX9 453 aaPredicted RBP6.76□□□□□ -1.33
CCDC30-213ENST00000509712 L3MBTL2Q969R5 705 aa6.76□□□□□ -1.33
CCDC30-213ENST00000509712 MYO19Q96H55 970 aa6.76□□□□□ -1.33
CCDC30-213ENST00000509712 EGFL7Q9UHF1 273 aa6.76□□□□□ -1.33
CCDC30-213ENST00000509712 SERTM1A2A2V5 107 aa6.75□□□□□ -1.33
CCDC30-213ENST00000509712 TTLL8A6PVC2 850 aa6.75□□□□□ -1.33
CCDC30-213ENST00000509712 ECM1Q16610 540 aa6.75□□□□□ -1.33
CCDC30-213ENST00000509712 SLC27A3Q5K4L6 730 aa6.75□□□□□ -1.33
CCDC30-213ENST00000509712 TRIM47Q96LD4 638 aa6.75□□□□□ -1.33
CCDC30-213ENST00000509712 NIFKQ9BYG3 293 aaKnown RBP6.75□□□□□ -1.33
CCDC30-213ENST00000509712 SAP130Q9H0E3 1048 aa6.75□□□□□ -1.33
CCDC30-213ENST00000509712 GZF1Q9H116 711 aaPredicted RBP6.75□□□□□ -1.33
CCDC30-213ENST00000509712 SENP2Q9HC62 589 aa6.75□□□□□ -1.33
CCDC30-213ENST00000509712 DNMT3AQ9Y6K1 912 aaPredicted RBP6.75□□□□□ -1.33
CCDC30-213ENST00000509712 SOWAHDA6NJG2 315 aa6.74□□□□□ -1.33
CCDC30-213ENST00000509712 TMEM214Q6NUQ4 689 aaKnown RBP6.74□□□□□ -1.33
CCDC30-213ENST00000509712 NBPF10Q6P3W6 841 aaKnown RBP6.74□□□□□ -1.33
CCDC30-213ENST00000509712 SND1Q7KZF4 910 aaKnown RBP eCLIP6.74□□□□□ -1.33
CCDC30-213ENST00000509712 TEX2Q8IWB9 1127 aa6.74□□□□□ -1.33
CCDC30-213ENST00000509712 GTF3C2Q8WUA4 911 aaPredicted RBP6.74□□□□□ -1.33
CCDC30-213ENST00000509712 C7orf43Q8WVR3 580 aa6.74□□□□□ -1.33
CCDC30-213ENST00000509712 CABP1Q9NZU7 370 aa6.74□□□□□ -1.33
CCDC30-213ENST00000509712 DNMT3LQ9UJW3 386 aa6.74□□□□□ -1.33
CCDC30-213ENST00000509712 NAP1L2Q9ULW6 460 aaPredicted RBP6.74□□□□□ -1.33
CCDC30-213ENST00000509712 PARP3Q9Y6F1 533 aa6.74□□□□□ -1.33
CCDC30-213ENST00000509712 TNFRSF10BO14763 440 aa6.74□□□□□ -1.33
CCDC30-213ENST00000509712 SNRPBP14678 240 aaKnown RBP6.74□□□□□ -1.33
CCDC30-213ENST00000509712 ZNF211Q13398 564 aaPredicted RBP6.74□□□□□ -1.33
CCDC30-213ENST00000509712 WDR44Q5JSH3 913 aa6.74□□□□□ -1.33
CCDC30-213ENST00000509712 LYSMD3Q7Z3D4 306 aa6.74□□□□□ -1.33
CCDC30-213ENST00000509712 HELQQ8TDG4 1101 aa6.74□□□□□ -1.33
CCDC30-213ENST00000509712 KIFC2Q96AC6 838 aa6.74□□□□□ -1.33
CCDC30-213ENST00000509712 LRFN2Q9ULH4 789 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms