RNA–Protein interactions for RNA: ENST00000509712.5

CCDC30-213, Transcript of coiled-coil domain containing 30, humanhuman

TSL 2

Gene CCDC30, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-213ENST00000509712 AEBP2Q6ZN18 517 aaPredicted RBP18.72■□□□□ 0.59
CCDC30-213ENST00000509712 CHIC1Q5VXU3 224 aa18■□□□□ 0.47
CCDC30-213ENST00000509712 SENP3Q9H4L4 574 aaPredicted RBP16.06■□□□□ 0.16
CCDC30-213ENST00000509712 POTEDQ86YR6 584 aa16.05■□□□□ 0.16
CCDC30-213ENST00000509712 PHF23Q9BUL5 403 aaPredicted RBP15.85■□□□□ 0.13
CCDC30-213ENST00000509712 FOXD1Q16676 465 aa14.99□□□□□ -0.01
CCDC30-213ENST00000509712 PLPPR3Q6T4P5 718 aa14.62□□□□□ -0.07
CCDC30-213ENST00000509712 MSH5O43196 834 aa14.43□□□□□ -0.1
CCDC30-213ENST00000509712 PPP6R1Q9UPN7 881 aa13.96□□□□□ -0.17
CCDC30-213ENST00000509712 PIAS4Q8N2W9 510 aaPredicted RBP13.95□□□□□ -0.18
CCDC30-213ENST00000509712 ADRA2BP18089 450 aa13.94□□□□□ -0.18
CCDC30-213ENST00000509712 CACNB1Q02641 598 aaPredicted RBP13.06□□□□□ -0.32
CCDC30-213ENST00000509712 KCNA4P22459 653 aa12.9□□□□□ -0.34
CCDC30-213ENST00000509712 PPP4R3CPQ6ZMV5 832 aa12.9□□□□□ -0.34
CCDC30-213ENST00000509712 SCAF1Q9H7N4 1312 aaKnown RBP12.71□□□□□ -0.37
CCDC30-213ENST00000509712 MAPK8IP2Q13387 824 aaPredicted RBP12.69□□□□□ -0.38
CCDC30-213ENST00000509712 DMRT2Q9Y5R5 561 aa12.67□□□□□ -0.38
CCDC30-213ENST00000509712 NCBP3Q53F19 620 aaKnown RBP12.57□□□□□ -0.4
CCDC30-213ENST00000509712 CNKSR2Q8WXI2 1034 aa12.52□□□□□ -0.4
CCDC30-213ENST00000509712 NPM3O75607 178 aaKnown RBP12.47□□□□□ -0.41
CCDC30-213ENST00000509712 POTEHQ6S545 545 aa12.37□□□□□ -0.43
CCDC30-213ENST00000509712 SLC4A1APQ9BWU0 796 aaKnown RBP12.29□□□□□ -0.44
CCDC30-213ENST00000509712 RNF216Q9NWF9 866 aaPredicted RBP12.26□□□□□ -0.45
CCDC30-213ENST00000509712 DCAF8L1A6NGE4 600 aa12.23□□□□□ -0.45
CCDC30-213ENST00000509712 HOXD11P31277 338 aaPredicted RBP12.21□□□□□ -0.46
CCDC30-213ENST00000509712 EHMT2Q96KQ7 1210 aa12.2□□□□□ -0.46
CCDC30-213ENST00000509712 DNAJC5BQ9UF47 199 aa12.17□□□□□ -0.46
CCDC30-213ENST00000509712 RNF39Q9H2S5 420 aa12.09□□□□□ -0.47
CCDC30-213ENST00000509712 CSRNP3Q8WYN3 585 aa12.03□□□□□ -0.48
CCDC30-213ENST00000509712 ZBTB22O15209 634 aa11.94□□□□□ -0.5
CCDC30-213ENST00000509712 C1QBPQ07021 282 aaKnown RBP11.93□□□□□ -0.5
CCDC30-213ENST00000509712 FOXD4L1Q9NU39 408 aa11.79□□□□□ -0.52
CCDC30-213ENST00000509712 SLC4A2P04920 1241 aa11.75□□□□□ -0.53
CCDC30-213ENST00000509712 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.61□□□□□ -0.55
CCDC30-213ENST00000509712 MYCNP04198 464 aaPredicted RBP11.5□□□□□ -0.57
CCDC30-213ENST00000509712 U3KPZ7 1027 aaPredicted RBP11.47□□□□□ -0.57
CCDC30-213ENST00000509712 ATXN8OSP0DMR3 200 aa11.36□□□□□ -0.59
CCDC30-213ENST00000509712 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.29□□□□□ -0.6
CCDC30-213ENST00000509712 HNRNPUL2Q1KMD3 747 aaKnown RBP11.29□□□□□ -0.6
CCDC30-213ENST00000509712 SAMD1Q6SPF0 538 aaPredicted RBP11.27□□□□□ -0.61
CCDC30-213ENST00000509712 ATF5Q9Y2D1 282 aaPredicted RBP11.22□□□□□ -0.61
CCDC30-213ENST00000509712 CAPN15O75808 1086 aa11.2□□□□□ -0.62
CCDC30-213ENST00000509712 DSG3P32926 999 aa11.17□□□□□ -0.62
CCDC30-213ENST00000509712 APLP2Q06481 763 aa11.16□□□□□ -0.62
CCDC30-213ENST00000509712 SPINK5Q9NQ38 1064 aaPredicted RBP11.16□□□□□ -0.62
CCDC30-213ENST00000509712 SP7Q8TDD2 431 aaPredicted RBP11.03□□□□□ -0.64
CCDC30-213ENST00000509712 TRHP20396 242 aaPredicted RBP11.02□□□□□ -0.65
CCDC30-213ENST00000509712 ZNF219Q9P2Y4 722 aaPredicted RBP11.01□□□□□ -0.65
CCDC30-213ENST00000509712 ABCB7O75027 752 aa10.9□□□□□ -0.67
CCDC30-213ENST00000509712 POLA2Q14181 598 aa10.86□□□□□ -0.67
CCDC30-213ENST00000509712 FKBP8Q14318 412 aa10.79□□□□□ -0.68
CCDC30-213ENST00000509712 MKRN4PQ13434 485 aaPredicted RBP10.76□□□□□ -0.69
CCDC30-213ENST00000509712 CHRDL2Q6WN34 429 aa10.71□□□□□ -0.69
CCDC30-213ENST00000509712 RBM42Q9BTD8 480 aaKnown RBP10.7□□□□□ -0.7
CCDC30-213ENST00000509712 PLSCR2Q9NRY7 297 aa10.68□□□□□ -0.7
CCDC30-213ENST00000509712 ZBTB12Q9Y330 459 aaPredicted RBP10.66□□□□□ -0.7
CCDC30-213ENST00000509712 FBLN2P98095 1184 aa10.65□□□□□ -0.71
CCDC30-213ENST00000509712 SPDYE4A6NLX3 237 aa10.55□□□□□ -0.72
CCDC30-213ENST00000509712 PROM2Q8N271 834 aa10.53□□□□□ -0.72
CCDC30-213ENST00000509712 OSCARQ8IYS5 282 aa10.5□□□□□ -0.73
CCDC30-213ENST00000509712 SPDYE2BA6NHP3 402 aa10.39□□□□□ -0.75
CCDC30-213ENST00000509712 SPDYE6P0CI01 402 aa10.39□□□□□ -0.75
CCDC30-213ENST00000509712 SPDYE2Q495Y8 402 aa10.39□□□□□ -0.75
CCDC30-213ENST00000509712 AKT1S1Q96B36 256 aa10.37□□□□□ -0.75
CCDC30-213ENST00000509712 ZNF692Q9BU19 519 aaPredicted RBP10.35□□□□□ -0.75
CCDC30-213ENST00000509712 SSUH2Q9Y2M2 353 aa10.35□□□□□ -0.75
CCDC30-213ENST00000509712 HAX1O00165 279 aa10.33□□□□□ -0.76
CCDC30-213ENST00000509712 FBXO3Q9UK99 471 aa10.31□□□□□ -0.76
CCDC30-213ENST00000509712 LHX8Q68G74 356 aa10.31□□□□□ -0.76
CCDC30-213ENST00000509712 RTN4Q9NQC3 1192 aaKnown RBP10.29□□□□□ -0.76
CCDC30-213ENST00000509712 AMER1Q5JTC6 1135 aaPredicted RBP10.27□□□□□ -0.76
CCDC30-213ENST00000509712 REM2Q8IYK8 340 aaPredicted RBP10.26□□□□□ -0.77
CCDC30-213ENST00000509712 PIP4P2Q8N4L2 257 aa10.26□□□□□ -0.77
CCDC30-213ENST00000509712 PABPN1Q86U42 306 aaKnown RBP eCLIP10.23□□□□□ -0.77
CCDC30-213ENST00000509712 VASPP50552 380 aaPredicted RBP10.22□□□□□ -0.77
CCDC30-213ENST00000509712 PITPNM1O00562 1244 aa10.16□□□□□ -0.78
CCDC30-213ENST00000509712 FXR2P51116 673 aaKnown RBP eCLIP10.14□□□□□ -0.79
CCDC30-213ENST00000509712 IFNLR1Q8IU57 520 aaPredicted RBP10.13□□□□□ -0.79
CCDC30-213ENST00000509712 STAG3Q9UJ98 1225 aa10.08□□□□□ -0.8
CCDC30-213ENST00000509712 SPDYE1Q8NFV5 336 aaPredicted RBP10.06□□□□□ -0.8
CCDC30-213ENST00000509712 CLEC11AQ9Y240 323 aa10.01□□□□□ -0.81
CCDC30-213ENST00000509712 EVX2Q03828 476 aa9.99□□□□□ -0.81
CCDC30-213ENST00000509712 PRR29P0C7W0 189 aa9.93□□□□□ -0.82
CCDC30-213ENST00000509712 PLCD3Q8N3E9 789 aa9.93□□□□□ -0.82
CCDC30-213ENST00000509712 PRKAR2AP13861 404 aaKnown RBP9.92□□□□□ -0.82
CCDC30-213ENST00000509712 MIER1Q8N108 512 aa9.92□□□□□ -0.82
CCDC30-213ENST00000509712 PKD2Q13563 968 aa9.9□□□□□ -0.82
CCDC30-213ENST00000509712 SPOCK2Q92563 424 aa9.9□□□□□ -0.82
CCDC30-213ENST00000509712 KLHL34Q8N239 644 aa9.88□□□□□ -0.83
CCDC30-213ENST00000509712 CREBZFQ9NS37 354 aa9.85□□□□□ -0.83
CCDC30-213ENST00000509712 PCDH10Q9P2E7 1040 aa9.85□□□□□ -0.83
CCDC30-213ENST00000509712 C19orf67A6NJJ6 358 aa9.83□□□□□ -0.84
CCDC30-213ENST00000509712 ZBTB47Q9UFB7 747 aaPredicted RBP9.82□□□□□ -0.84
CCDC30-213ENST00000509712 MNX1P50219 401 aaPredicted RBP9.81□□□□□ -0.84
CCDC30-213ENST00000509712 PLEKHG5O94827 1062 aa9.8□□□□□ -0.84
CCDC30-213ENST00000509712 GABBR2O75899 941 aa9.79□□□□□ -0.84
CCDC30-213ENST00000509712 CHADLQ6NUI6 762 aa9.79□□□□□ -0.84
CCDC30-213ENST00000509712 POTEMA6NI47 508 aa9.76□□□□□ -0.85
CCDC30-213ENST00000509712 NUBP1P53384 320 aa9.75□□□□□ -0.85
CCDC30-213ENST00000509712 ECM2O94769 699 aaPredicted RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms