RNA–Protein interactions for RNA: ENST00000509234.1

TRAPPC13-210, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-210ENST00000509234 HMGXB3Q12766 1538 aa7.77□□□□□ -1.17
TRAPPC13-210ENST00000509234 PEG3Q9GZU2 1588 aa7.76□□□□□ -1.17
TRAPPC13-210ENST00000509234 ATAD2Q6PL18 1390 aa7.76□□□□□ -1.17
TRAPPC13-210ENST00000509234 CAPN5O15484 640 aaPredicted RBP7.76□□□□□ -1.17
TRAPPC13-210ENST00000509234 HIRAP54198 1017 aaPredicted RBP7.76□□□□□ -1.17
TRAPPC13-210ENST00000509234 RELBQ01201 579 aa7.76□□□□□ -1.17
TRAPPC13-210ENST00000509234 SLC9A9Q8IVB4 645 aa7.76□□□□□ -1.17
TRAPPC13-210ENST00000509234 LINC00528Q8N1L1 170 aa7.76□□□□□ -1.17
TRAPPC13-210ENST00000509234 HINFPQ9BQA5 517 aa7.76□□□□□ -1.17
TRAPPC13-210ENST00000509234 TSEN34Q9BSV6 310 aaKnown RBP7.76□□□□□ -1.17
TRAPPC13-210ENST00000509234 C2orf49Q9BVC5 232 aaPredicted RBP7.76□□□□□ -1.17
TRAPPC13-210ENST00000509234 GRIP2Q9C0E4 1043 aa7.76□□□□□ -1.17
TRAPPC13-210ENST00000509234 BAZ1AQ9NRL2 1556 aaPredicted RBP7.76□□□□□ -1.17
TRAPPC13-210ENST00000509234 RNF144AP50876 292 aaPredicted RBP7.75□□□□□ -1.17
TRAPPC13-210ENST00000509234 TLR1Q15399 786 aa7.75□□□□□ -1.17
TRAPPC13-210ENST00000509234 FOXD4L5Q5VV16 416 aaPredicted RBP7.75□□□□□ -1.17
TRAPPC13-210ENST00000509234 CAPN12Q6ZSI9 719 aa7.75□□□□□ -1.17
TRAPPC13-210ENST00000509234 PPARGC1BQ86YN6 1023 aaKnown RBP7.75□□□□□ -1.17
TRAPPC13-210ENST00000509234 CCER1Q8TC90 406 aaPredicted RBP7.75□□□□□ -1.17
TRAPPC13-210ENST00000509234 ZDHHC1Q8WTX9 485 aa7.75□□□□□ -1.17
TRAPPC13-210ENST00000509234 SCG3Q8WXD2 468 aaKnown RBP7.75□□□□□ -1.17
TRAPPC13-210ENST00000509234 SERPINB4P48594 390 aa7.74□□□□□ -1.17
TRAPPC13-210ENST00000509234 PSMA6P60900 246 aaKnown RBP7.74□□□□□ -1.17
TRAPPC13-210ENST00000509234 TEAD4Q15561 434 aa7.74□□□□□ -1.17
TRAPPC13-210ENST00000509234 ECM1Q16610 540 aa7.74□□□□□ -1.17
TRAPPC13-210ENST00000509234 ZNF395Q9H8N7 513 aaPredicted RBP7.74□□□□□ -1.17
TRAPPC13-210ENST00000509234 ATP13A2Q9NQ11 1180 aa7.74□□□□□ -1.17
TRAPPC13-210ENST00000509234 EGFL7Q9UHF1 273 aa7.74□□□□□ -1.17
TRAPPC13-210ENST00000509234 EML1O00423 815 aa7.73□□□□□ -1.17
TRAPPC13-210ENST00000509234 PTCD1O75127 700 aaKnown RBP7.73□□□□□ -1.17
TRAPPC13-210ENST00000509234 MRPL14Q6P1L8 145 aaKnown RBP7.73□□□□□ -1.17
TRAPPC13-210ENST00000509234 SND1Q7KZF4 910 aaKnown RBP eCLIP7.73□□□□□ -1.17
TRAPPC13-210ENST00000509234 TRIM46Q7Z4K8 759 aa7.73□□□□□ -1.17
TRAPPC13-210ENST00000509234 ZSCAN1Q8NBB4 408 aa7.73□□□□□ -1.17
TRAPPC13-210ENST00000509234 SLC16A10Q8TF71 515 aa7.73□□□□□ -1.17
TRAPPC13-210ENST00000509234 GZF1Q9H116 711 aaPredicted RBP7.73□□□□□ -1.17
TRAPPC13-210ENST00000509234 SENP2Q9HC62 589 aa7.73□□□□□ -1.17
TRAPPC13-210ENST00000509234 SOWAHDA6NJG2 315 aa7.72□□□□□ -1.17
TRAPPC13-210ENST00000509234 SPATA31C2B4DYI2 1134 aa7.72□□□□□ -1.17
TRAPPC13-210ENST00000509234 NBPF15Q8N660 670 aa7.72□□□□□ -1.17
TRAPPC13-210ENST00000509234 SEPT3Q9UH03 358 aa7.72□□□□□ -1.17
TRAPPC13-210ENST00000509234 NPR3P17342 541 aa7.71□□□□□ -1.18
TRAPPC13-210ENST00000509234 CTSOP43234 321 aaPredicted RBP7.71□□□□□ -1.18
TRAPPC13-210ENST00000509234 TBCELQ5QJ74 424 aa7.71□□□□□ -1.18
TRAPPC13-210ENST00000509234 RNF217Q8TC41 542 aa7.71□□□□□ -1.18
TRAPPC13-210ENST00000509234 MYO19Q96H55 970 aa7.71□□□□□ -1.18
TRAPPC13-210ENST00000509234 TRIM47Q96LD4 638 aa7.71□□□□□ -1.18
TRAPPC13-210ENST00000509234 INSM2Q96T92 566 aaPredicted RBP7.71□□□□□ -1.18
TRAPPC13-210ENST00000509234 MROH2BQ7Z745 1585 aa7.71□□□□□ -1.18
TRAPPC13-210ENST00000509234 MEN1O00255 615 aa7.7□□□□□ -1.18
TRAPPC13-210ENST00000509234 PPP1R12BO60237 982 aaPredicted RBP7.7□□□□□ -1.18
TRAPPC13-210ENST00000509234 SH3PXD2AQ5TCZ1 1133 aa7.7□□□□□ -1.18
TRAPPC13-210ENST00000509234 RHBDD1Q8TEB9 315 aa7.7□□□□□ -1.18
TRAPPC13-210ENST00000509234 C7orf43Q8WVR3 580 aa7.7□□□□□ -1.18
TRAPPC13-210ENST00000509234 NLRP3Q96P20 1036 aa7.7□□□□□ -1.18
TRAPPC13-210ENST00000509234 ZSCAN10Q96SZ4 725 aaPredicted RBP7.7□□□□□ -1.18
TRAPPC13-210ENST00000509234 QTRT2Q9H974 415 aaKnown RBP7.7□□□□□ -1.18
TRAPPC13-210ENST00000509234 DNMT3AQ9Y6K1 912 aaPredicted RBP7.7□□□□□ -1.18
TRAPPC13-210ENST00000509234 CUX2O14529 1486 aa7.69□□□□□ -1.18
TRAPPC13-210ENST00000509234 BAZ1BQ9UIG0 1483 aaKnown RBP7.69□□□□□ -1.18
TRAPPC13-210ENST00000509234 ICMTO60725 284 aa7.69□□□□□ -1.18
TRAPPC13-210ENST00000509234 NOS2P35228 1153 aa7.69□□□□□ -1.18
TRAPPC13-210ENST00000509234 MKNK1Q9BUB5 465 aa7.69□□□□□ -1.18
TRAPPC13-210ENST00000509234 SOS2Q07890 1332 aaPredicted RBP7.69□□□□□ -1.18
TRAPPC13-210ENST00000509234 TNFRSF10BO14763 440 aa7.68□□□□□ -1.18
TRAPPC13-210ENST00000509234 GMPRP36959 345 aa7.68□□□□□ -1.18
TRAPPC13-210ENST00000509234 C4orf17Q53FE4 359 aa7.68□□□□□ -1.18
TRAPPC13-210ENST00000509234 WDR44Q5JSH3 913 aa7.68□□□□□ -1.18
TRAPPC13-210ENST00000509234 HELQQ8TDG4 1101 aa7.68□□□□□ -1.18
TRAPPC13-210ENST00000509234 GTF3C2Q8WUA4 911 aaPredicted RBP7.68□□□□□ -1.18
TRAPPC13-210ENST00000509234 SAP130Q9H0E3 1048 aa7.68□□□□□ -1.18
TRAPPC13-210ENST00000509234 MTMR7Q9Y216 660 aa7.68□□□□□ -1.18
TRAPPC13-210ENST00000509234 SERTM1A2A2V5 107 aa7.67□□□□□ -1.18
TRAPPC13-210ENST00000509234 BMP1P13497 986 aa7.67□□□□□ -1.18
TRAPPC13-210ENST00000509234 TMCO4Q5TGY1 634 aa7.67□□□□□ -1.18
TRAPPC13-210ENST00000509234 L3MBTL2Q969R5 705 aa7.67□□□□□ -1.18
TRAPPC13-210ENST00000509234 NIFKQ9BYG3 293 aaKnown RBP7.67□□□□□ -1.18
TRAPPC13-210ENST00000509234 LRFN2Q9ULH4 789 aa7.67□□□□□ -1.18
TRAPPC13-210ENST00000509234 NESP48681 1621 aa7.67□□□□□ -1.18
TRAPPC13-210ENST00000509234 LORP23490 312 aaPredicted RBP7.66□□□□□ -1.18
TRAPPC13-210ENST00000509234 SF3B2Q13435 895 aaKnown RBP7.66□□□□□ -1.18
TRAPPC13-210ENST00000509234 COX20Q5RI15 118 aa7.66□□□□□ -1.18
TRAPPC13-210ENST00000509234 C1orf53Q5VUE5 145 aa7.66□□□□□ -1.18
TRAPPC13-210ENST00000509234 C16orf46Q6P387 395 aa7.66□□□□□ -1.18
TRAPPC13-210ENST00000509234 KIFC2Q96AC6 838 aa7.66□□□□□ -1.18
TRAPPC13-210ENST00000509234 UPP2O95045 317 aa7.65□□□□□ -1.18
TRAPPC13-210ENST00000509234 BMP2P12643 396 aa7.65□□□□□ -1.18
TRAPPC13-210ENST00000509234 MFAP1P55081 439 aaKnown RBP7.65□□□□□ -1.18
TRAPPC13-210ENST00000509234 ARHGAP4P98171 946 aa7.65□□□□□ -1.18
TRAPPC13-210ENST00000509234 ERCC6Q03468 1493 aa7.65□□□□□ -1.18
TRAPPC13-210ENST00000509234 ZNF211Q13398 564 aaPredicted RBP7.65□□□□□ -1.18
TRAPPC13-210ENST00000509234 CHMP7Q8WUX9 453 aaPredicted RBP7.65□□□□□ -1.18
TRAPPC13-210ENST00000509234 ZFP42Q96MM3 310 aa7.65□□□□□ -1.18
TRAPPC13-210ENST00000509234 POLMQ9NP87 494 aaPredicted RBP7.65□□□□□ -1.18
TRAPPC13-210ENST00000509234 ZDHHC3Q9NYG2 299 aa7.65□□□□□ -1.18
TRAPPC13-210ENST00000509234 CABP1Q9NZU7 370 aa7.65□□□□□ -1.18
TRAPPC13-210ENST00000509234 LAMC3Q9Y6N6 1575 aa7.64□□□□□ -1.19
TRAPPC13-210ENST00000509234 TXLNAP40222 546 aa7.64□□□□□ -1.19
TRAPPC13-210ENST00000509234 FKBP4Q02790 459 aaKnown RBP eCLIP7.64□□□□□ -1.19
TRAPPC13-210ENST00000509234 NAA30Q147X3 362 aaPredicted RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms