RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 ANP32CO43423 234 aa24.01■■□□□ 1.43
CLDND1-220ENST00000508902 FMNL2Q96PY5 1086 aa24.01■■□□□ 1.43
CLDND1-220ENST00000508902 ADRA2BP18089 450 aa24■■□□□ 1.43
CLDND1-220ENST00000508902 TRAPPC3LQ5T215 181 aa24■■□□□ 1.43
CLDND1-220ENST00000508902 PNISRQ8TF01 805 aaKnown RBP24■■□□□ 1.43
CLDND1-220ENST00000508902 GOLGB1Q14789 3259 aaKnown RBP24■■□□□ 1.43
CLDND1-220ENST00000508902 UTRNP46939 3433 aa24■■□□□ 1.43
CLDND1-220ENST00000508902 SCN7AQ01118 1682 aa23.99■■□□□ 1.43
CLDND1-220ENST00000508902 GYS1P13807 737 aa23.99■■□□□ 1.43
CLDND1-220ENST00000508902 NEUROD2Q15784 382 aa23.99■■□□□ 1.43
CLDND1-220ENST00000508902 USP16Q9Y5T5 823 aa23.99■■□□□ 1.43
CLDND1-220ENST00000508902 KIAA1551Q9HCM1 1747 aa23.98■■□□□ 1.43
CLDND1-220ENST00000508902 SYT17Q9BSW7 474 aa23.98■■□□□ 1.43
CLDND1-220ENST00000508902 USP42Q9H9J4 1324 aaKnown RBP23.98■■□□□ 1.43
CLDND1-220ENST00000508902 COL15A1P39059 1388 aa23.98■■□□□ 1.43
CLDND1-220ENST00000508902 BCORQ6W2J9 1755 aa23.96■■□□□ 1.43
CLDND1-220ENST00000508902 A1BGP04217 495 aa23.96■■□□□ 1.43
CLDND1-220ENST00000508902 POLD1P28340 1107 aa23.96■■□□□ 1.43
CLDND1-220ENST00000508902 PIP4K2AP48426 406 aaPredicted RBP23.96■■□□□ 1.43
CLDND1-220ENST00000508902 MRS2Q9HD23 443 aa23.96■■□□□ 1.43
CLDND1-220ENST00000508902 KIF13BQ9NQT8 1826 aa23.96■■□□□ 1.43
CLDND1-220ENST00000508902 SENP3-EIF4A1A0A087X0R7 540 aa23.95■■□□□ 1.42
CLDND1-220ENST00000508902 APAF1O14727 1248 aa23.95■■□□□ 1.42
CLDND1-220ENST00000508902 EIF5P55010 431 aaKnown RBP23.95■■□□□ 1.42
CLDND1-220ENST00000508902 EIF4A1P60842 406 aaKnown RBP23.95■■□□□ 1.42
CLDND1-220ENST00000508902 NLGN2Q8NFZ4 835 aa23.95■■□□□ 1.42
CLDND1-220ENST00000508902 BCL2L12Q9HB09 334 aa23.95■■□□□ 1.42
CLDND1-220ENST00000508902 CANXP27824 592 aaKnown RBP23.94■■□□□ 1.42
CLDND1-220ENST00000508902 RFC4P35249 363 aa23.93■■□□□ 1.42
CLDND1-220ENST00000508902 FKBP8Q14318 412 aa23.93■■□□□ 1.42
CLDND1-220ENST00000508902 NBPF26B4DH59 902 aa23.92■■□□□ 1.42
CLDND1-220ENST00000508902 STARD3NLO95772 234 aa23.92■■□□□ 1.42
CLDND1-220ENST00000508902 MMP10P09238 476 aa23.92■■□□□ 1.42
CLDND1-220ENST00000508902 NBPF10Q6P3W6 841 aaKnown RBP23.92■■□□□ 1.42
CLDND1-220ENST00000508902 NBPF15Q8N660 670 aa23.92■■□□□ 1.42
CLDND1-220ENST00000508902 AFDNP55196 1824 aaKnown RBP23.91■■□□□ 1.42
CLDND1-220ENST00000508902 SNRPA1P09661 255 aaKnown RBP23.91■■□□□ 1.42
CLDND1-220ENST00000508902 DDR1Q08345 913 aa23.91■■□□□ 1.42
CLDND1-220ENST00000508902 USPL1Q5W0Q7 1092 aa23.91■■□□□ 1.42
CLDND1-220ENST00000508902 GIGYF1O75420 1035 aaPredicted RBP23.9■■□□□ 1.42
CLDND1-220ENST00000508902 LMOD3Q0VAK6 560 aa23.9■■□□□ 1.42
CLDND1-220ENST00000508902 TEX13AQ9BXU3 409 aaPredicted RBP23.9■■□□□ 1.42
CLDND1-220ENST00000508902 NRXN2Q9P2S2 1712 aa23.9■■□□□ 1.42
CLDND1-220ENST00000508902 KLHL34Q8N239 644 aa23.89■■□□□ 1.41
CLDND1-220ENST00000508902 TSPYL4Q9UJ04 414 aa23.89■■□□□ 1.41
CLDND1-220ENST00000508902 C10orf71Q711Q0 1435 aa23.88■■□□□ 1.41
CLDND1-220ENST00000508902 KRT24Q2M2I5 525 aa23.88■■□□□ 1.41
CLDND1-220ENST00000508902 NARFQ9UHQ1 456 aa23.88■■□□□ 1.41
CLDND1-220ENST00000508902 CHL1O00533 1208 aa23.87■■□□□ 1.41
CLDND1-220ENST00000508902 IL6STP40189 918 aaPredicted RBP23.87■■□□□ 1.41
CLDND1-220ENST00000508902 N4BP2Q86UW6 1770 aaPredicted RBP23.86■■□□□ 1.41
CLDND1-220ENST00000508902 NLGN1Q8N2Q7 840 aa23.86■■□□□ 1.41
CLDND1-220ENST00000508902 ZNF853P0CG23 659 aa23.85■■□□□ 1.41
CLDND1-220ENST00000508902 TM4SF1P30408 202 aa23.85■■□□□ 1.41
CLDND1-220ENST00000508902 BABAM1Q9NWV8 329 aa23.84■■□□□ 1.41
CLDND1-220ENST00000508902 TBC1D2BQ9UPU7 963 aa23.84■■□□□ 1.41
CLDND1-220ENST00000508902 BRCA1P38398 1863 aaKnown RBP23.83■■□□□ 1.41
CLDND1-220ENST00000508902 PXDNLA1KZ92 1463 aa23.83■■□□□ 1.41
CLDND1-220ENST00000508902 POLRMTO00411 1230 aaKnown RBP23.83■■□□□ 1.41
CLDND1-220ENST00000508902 CAMTA2O94983 1202 aa23.83■■□□□ 1.41
CLDND1-220ENST00000508902 NFIXQ14938 502 aa23.83■■□□□ 1.41
CLDND1-220ENST00000508902 ZNF330Q9Y3S2 320 aaPredicted RBP23.83■■□□□ 1.41
CLDND1-220ENST00000508902 LRP10Q7Z4F1 713 aa23.82■■□□□ 1.4
CLDND1-220ENST00000508902 CD2APQ9Y5K6 639 aa23.82■■□□□ 1.4
CLDND1-220ENST00000508902 ZPR1O75312 459 aa23.81■■□□□ 1.4
CLDND1-220ENST00000508902 ANKRD31Q8N7Z5 1873 aa23.81■■□□□ 1.4
CLDND1-220ENST00000508902 MBIPQ9NS73 344 aa23.8■■□□□ 1.4
CLDND1-220ENST00000508902 LAS1LQ9Y4W2 734 aaKnown RBP23.8■■□□□ 1.4
CLDND1-220ENST00000508902 PDIA6Q15084 440 aa23.79■■□□□ 1.4
CLDND1-220ENST00000508902 TBC1D9BQ66K14 1250 aa23.79■■□□□ 1.4
CLDND1-220ENST00000508902 CFAP44Q96MT7 982 aa23.79■■□□□ 1.4
CLDND1-220ENST00000508902 CARMIL3Q8ND23 1372 aa23.78■■□□□ 1.4
CLDND1-220ENST00000508902 NUP98P52948 1817 aa23.78■■□□□ 1.4
CLDND1-220ENST00000508902 A0A087WZG4 1122 aa23.78■■□□□ 1.4
CLDND1-220ENST00000508902 PROSER3Q2NL68 480 aa23.78■■□□□ 1.4
CLDND1-220ENST00000508902 DZIP3Q86Y13 1208 aaKnown RBP23.78■■□□□ 1.4
CLDND1-220ENST00000508902 YBX3P16989 372 aaKnown RBP eCLIP23.77■■□□□ 1.4
CLDND1-220ENST00000508902 ANXA1P04083 346 aa23.76■■□□□ 1.39
CLDND1-220ENST00000508902 CCDC27Q2M243 656 aa23.76■■□□□ 1.39
CLDND1-220ENST00000508902 WWC1Q8IX03 1113 aa23.76■■□□□ 1.39
CLDND1-220ENST00000508902 FAM9BQ8IZU0 186 aa23.76■■□□□ 1.39
CLDND1-220ENST00000508902 IFT57Q9NWB7 429 aa23.76■■□□□ 1.39
CLDND1-220ENST00000508902 PARP3Q9Y6F1 533 aa23.76■■□□□ 1.39
CLDND1-220ENST00000508902 TTLL7Q6ZT98 887 aa23.75■■□□□ 1.39
CLDND1-220ENST00000508902 COL11A2P13942 1736 aaPredicted RBP23.74■■□□□ 1.39
CLDND1-220ENST00000508902 DLEC1Q9Y238 1755 aa23.74■■□□□ 1.39
CLDND1-220ENST00000508902 HLFQ16534 295 aa23.74■■□□□ 1.39
CLDND1-220ENST00000508902 BICDL1Q6ZP65 573 aa23.74■■□□□ 1.39
CLDND1-220ENST00000508902 WWC3Q9ULE0 1092 aa23.74■■□□□ 1.39
CLDND1-220ENST00000508902 MYL6BP14649 208 aa23.73■■□□□ 1.39
CLDND1-220ENST00000508902 EIF2S2P20042 333 aaKnown RBP23.73■■□□□ 1.39
CLDND1-220ENST00000508902 NECTIN2Q92692 538 aa23.73■■□□□ 1.39
CLDND1-220ENST00000508902 KCNA3P22001 575 aa23.72■■□□□ 1.39
CLDND1-220ENST00000508902 NGEFQ8N5V2 710 aa23.72■■□□□ 1.39
CLDND1-220ENST00000508902 ERBB4Q15303 1308 aa23.71■■□□□ 1.39
CLDND1-220ENST00000508902 SERPINB2P05120 415 aa23.71■■□□□ 1.39
CLDND1-220ENST00000508902 CHD4Q14839 1912 aa23.71■■□□□ 1.39
CLDND1-220ENST00000508902 NCBP3Q53F19 620 aaKnown RBP23.7■■□□□ 1.38
CLDND1-220ENST00000508902 TSR2Q969E8 191 aaKnown RBP23.7■■□□□ 1.38
CLDND1-220ENST00000508902 SALL2Q9Y467 1007 aaPredicted RBP23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms