RNA–Protein interactions for RNA: ENST00000508715.5

PTPN20-220, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-220ENST00000508715 FANCIQ9NVI1 1328 aa13.49□□□□□ -0.25
PTPN20-220ENST00000508715 TRMT2AQ8IZ69 625 aaKnown RBP13.49□□□□□ -0.25
PTPN20-220ENST00000508715 TSPYL6Q8N831 410 aa13.49□□□□□ -0.25
PTPN20-220ENST00000508715 C8orf58Q8NAV2 365 aa13.49□□□□□ -0.25
PTPN20-220ENST00000508715 PDGFDQ9GZP0 370 aaPredicted RBP13.49□□□□□ -0.25
PTPN20-220ENST00000508715 CNTNAP4Q9C0A0 1308 aa13.48□□□□□ -0.25
PTPN20-220ENST00000508715 SNRPA1P09661 255 aaKnown RBP13.48□□□□□ -0.25
PTPN20-220ENST00000508715 CALD1Q05682 793 aaKnown RBP13.48□□□□□ -0.25
PTPN20-220ENST00000508715 SLFN5Q08AF3 891 aa13.48□□□□□ -0.25
PTPN20-220ENST00000508715 SLC15A2Q16348 729 aa13.48□□□□□ -0.25
PTPN20-220ENST00000508715 A1BGP04217 495 aa13.47□□□□□ -0.25
PTPN20-220ENST00000508715 CRKLP46109 303 aaKnown RBP13.47□□□□□ -0.25
PTPN20-220ENST00000508715 RC3H1Q5TC82 1133 aaKnown RBP13.47□□□□□ -0.25
PTPN20-220ENST00000508715 ZBTB1Q9Y2K1 713 aa13.47□□□□□ -0.25
PTPN20-220ENST00000508715 CACNA1FO60840 1977 aa13.47□□□□□ -0.25
PTPN20-220ENST00000508715 PNPLA7Q6ZV29 1317 aa13.46□□□□□ -0.25
PTPN20-220ENST00000508715 NBPF26B4DH59 902 aa13.46□□□□□ -0.25
PTPN20-220ENST00000508715 PIP4K2AP48426 406 aaPredicted RBP13.46□□□□□ -0.25
PTPN20-220ENST00000508715 GOLGA2Q08379 1002 aa13.46□□□□□ -0.25
PTPN20-220ENST00000508715 NBPF14Q5TI25 921 aa13.46□□□□□ -0.25
PTPN20-220ENST00000508715 NBPF10Q6P3W6 841 aaKnown RBP13.46□□□□□ -0.25
PTPN20-220ENST00000508715 NBPF15Q8N660 670 aa13.46□□□□□ -0.25
PTPN20-220ENST00000508715 ZBED9Q6R2W3 1325 aa13.45□□□□□ -0.26
PTPN20-220ENST00000508715 COL24A1Q17RW2 1714 aa13.45□□□□□ -0.26
PTPN20-220ENST00000508715 ELL2O00472 640 aaPredicted RBP13.45□□□□□ -0.26
PTPN20-220ENST00000508715 PDIA6Q15084 440 aa13.45□□□□□ -0.26
PTPN20-220ENST00000508715 DUSP27Q5VZP5 1158 aa13.45□□□□□ -0.26
PTPN20-220ENST00000508715 LRP10Q7Z4F1 713 aa13.45□□□□□ -0.26
PTPN20-220ENST00000508715 CCDC87Q9NVE4 849 aa13.45□□□□□ -0.26
PTPN20-220ENST00000508715 PSDA5PKW4 1024 aaPredicted RBP13.44□□□□□ -0.26
PTPN20-220ENST00000508715 RPS6KA4O75676 772 aa13.44□□□□□ -0.26
PTPN20-220ENST00000508715 EXOSC9Q06265 439 aaKnown RBP13.44□□□□□ -0.26
PTPN20-220ENST00000508715 R3HDM1Q15032 1099 aaKnown RBP13.44□□□□□ -0.26
PTPN20-220ENST00000508715 TEX13AQ9BXU3 409 aaPredicted RBP13.44□□□□□ -0.26
PTPN20-220ENST00000508715 STK32BQ9NY57 414 aa13.44□□□□□ -0.26
PTPN20-220ENST00000508715 SOS1Q07889 1333 aaPredicted RBP13.43□□□□□ -0.26
PTPN20-220ENST00000508715 GNPATO15228 680 aa13.43□□□□□ -0.26
PTPN20-220ENST00000508715 EIF5P55010 431 aaKnown RBP13.43□□□□□ -0.26
PTPN20-220ENST00000508715 PROSER3Q2NL68 480 aa13.43□□□□□ -0.26
PTPN20-220ENST00000508715 COL23A1Q86Y22 540 aaPredicted RBP13.43□□□□□ -0.26
PTPN20-220ENST00000508715 NUP98P52948 1817 aa13.42□□□□□ -0.26
PTPN20-220ENST00000508715 E9PSI1 815 aa13.42□□□□□ -0.26
PTPN20-220ENST00000508715 VAMP4O75379 141 aa13.42□□□□□ -0.26
PTPN20-220ENST00000508715 ANXA1P04083 346 aa13.42□□□□□ -0.26
PTPN20-220ENST00000508715 HOXB7P09629 217 aa13.42□□□□□ -0.26
PTPN20-220ENST00000508715 EIF2S2P20042 333 aaKnown RBP13.42□□□□□ -0.26
PTPN20-220ENST00000508715 CANXP27824 592 aaKnown RBP13.42□□□□□ -0.26
PTPN20-220ENST00000508715 AK7Q96M32 723 aa13.42□□□□□ -0.26
PTPN20-220ENST00000508715 TFCP2L1Q9NZI6 479 aa13.42□□□□□ -0.26
PTPN20-220ENST00000508715 BCORQ6W2J9 1755 aa13.42□□□□□ -0.26
PTPN20-220ENST00000508715 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.41□□□□□ -0.26
PTPN20-220ENST00000508715 STARD3NLO95772 234 aa13.41□□□□□ -0.26
PTPN20-220ENST00000508715 NECTIN2Q92692 538 aa13.41□□□□□ -0.26
PTPN20-220ENST00000508715 MYH16Q9H6N6 1097 aa13.41□□□□□ -0.26
PTPN20-220ENST00000508715 SSFA2P28290 1259 aa13.4□□□□□ -0.26
PTPN20-220ENST00000508715 TWISTNBQ3B726 338 aaPredicted RBP13.4□□□□□ -0.26
PTPN20-220ENST00000508715 ARHGEF1Q92888 912 aaKnown RBP13.4□□□□□ -0.26
PTPN20-220ENST00000508715 SCN7AQ01118 1682 aa13.4□□□□□ -0.26
PTPN20-220ENST00000508715 PHF14O94880 888 aa13.39□□□□□ -0.27
PTPN20-220ENST00000508715 IL6STP40189 918 aaPredicted RBP13.39□□□□□ -0.27
PTPN20-220ENST00000508715 BCL2L12Q9HB09 334 aa13.39□□□□□ -0.27
PTPN20-220ENST00000508715 CHPF2Q9P2E5 772 aa13.39□□□□□ -0.27
PTPN20-220ENST00000508715 SRP68Q9UHB9 627 aaKnown RBP13.39□□□□□ -0.27
PTPN20-220ENST00000508715 RTCBQ9Y3I0 505 aaKnown RBP13.39□□□□□ -0.27
PTPN20-220ENST00000508715 COL15A1P39059 1388 aa13.39□□□□□ -0.27
PTPN20-220ENST00000508715 TCERG1O14776 1098 aaKnown RBP13.38□□□□□ -0.27
PTPN20-220ENST00000508715 HDGFL1Q5TGJ6 251 aa13.38□□□□□ -0.27
PTPN20-220ENST00000508715 ERBB4Q15303 1308 aa13.38□□□□□ -0.27
PTPN20-220ENST00000508715 MYL6BP14649 208 aa13.37□□□□□ -0.27
PTPN20-220ENST00000508715 TRAPPC3LQ5T215 181 aa13.37□□□□□ -0.27
PTPN20-220ENST00000508715 TTLL7Q6ZT98 887 aa13.37□□□□□ -0.27
PTPN20-220ENST00000508715 YTHDC1Q96MU7 727 aaKnown RBP13.37□□□□□ -0.27
PTPN20-220ENST00000508715 DDX21Q9NR30 783 aaKnown RBP eCLIP13.37□□□□□ -0.27
PTPN20-220ENST00000508715 AFDNP55196 1824 aaKnown RBP13.36□□□□□ -0.27
PTPN20-220ENST00000508715 ARFGEF2Q9Y6D5 1785 aa13.36□□□□□ -0.27
PTPN20-220ENST00000508715 G2E3Q7L622 706 aa13.36□□□□□ -0.27
PTPN20-220ENST00000508715 PHAXQ9H814 394 aaKnown RBP13.36□□□□□ -0.27
PTPN20-220ENST00000508715 TBC1D2BQ9UPU7 963 aa13.36□□□□□ -0.27
PTPN20-220ENST00000508715 USP42Q9H9J4 1324 aaKnown RBP13.36□□□□□ -0.27
PTPN20-220ENST00000508715 CAMTA2O94983 1202 aa13.35□□□□□ -0.27
PTPN20-220ENST00000508715 GYS1P13807 737 aa13.35□□□□□ -0.27
PTPN20-220ENST00000508715 HMGB2P26583 209 aaKnown RBP13.35□□□□□ -0.27
PTPN20-220ENST00000508715 FLAD1Q8NFF5 587 aa13.35□□□□□ -0.27
PTPN20-220ENST00000508715 NARFQ9UHQ1 456 aa13.35□□□□□ -0.27
PTPN20-220ENST00000508715 ZNF330Q9Y3S2 320 aaPredicted RBP13.35□□□□□ -0.27
PTPN20-220ENST00000508715 ANKRD36CQ5JPF3 1778 aa13.35□□□□□ -0.27
PTPN20-220ENST00000508715 ZBTB7AO95365 584 aa13.34□□□□□ -0.27
PTPN20-220ENST00000508715 HLFQ16534 295 aa13.34□□□□□ -0.27
PTPN20-220ENST00000508715 XAGE3Q8WTP9 111 aa13.34□□□□□ -0.27
PTPN20-220ENST00000508715 SGIP1Q9BQI5 828 aa13.34□□□□□ -0.27
PTPN20-220ENST00000508715 DBF4Q9UBU7 674 aaPredicted RBP13.34□□□□□ -0.27
PTPN20-220ENST00000508715 PTGER2P43116 358 aa13.33□□□□□ -0.28
PTPN20-220ENST00000508715 FKBP8Q14318 412 aa13.33□□□□□ -0.28
PTPN20-220ENST00000508715 CCDC30Q5VVM6 783 aa13.33□□□□□ -0.28
PTPN20-220ENST00000508715 USPL1Q5W0Q7 1092 aa13.33□□□□□ -0.28
PTPN20-220ENST00000508715 MSL1Q68DK7 614 aa13.33□□□□□ -0.28
PTPN20-220ENST00000508715 COPS6Q7L5N1 327 aa13.33□□□□□ -0.28
PTPN20-220ENST00000508715 DZIP3Q86Y13 1208 aaKnown RBP13.33□□□□□ -0.28
PTPN20-220ENST00000508715 SSH1Q8WYL5 1049 aa13.33□□□□□ -0.28
PTPN20-220ENST00000508715 RFC4P35249 363 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms