RNA–Protein interactions for RNA: ENST00000508308.1

HMGN1P16-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 16, humanhuman

BASIC

Gene HMGN1P16, Length 283 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P16-201ENST00000508308 KIF13BQ9NQT8 1826 aa8.82□□□□□ -1
HMGN1P16-201ENST00000508308 GRIN3BO60391 1043 aa8.81□□□□□ -1
HMGN1P16-201ENST00000508308 HMGB2P26583 209 aaKnown RBP8.81□□□□□ -1
HMGN1P16-201ENST00000508308 C1QTNF8P60827 252 aa8.81□□□□□ -1
HMGN1P16-201ENST00000508308 AMOTQ4VCS5 1084 aa8.81□□□□□ -1
HMGN1P16-201ENST00000508308 RC3H1Q5TC82 1133 aaKnown RBP8.81□□□□□ -1
HMGN1P16-201ENST00000508308 SULT6B1Q6IMI4 303 aa8.81□□□□□ -1
HMGN1P16-201ENST00000508308 NFATC2IPQ8NCF5 419 aa8.81□□□□□ -1
HMGN1P16-201ENST00000508308 KNSTRNQ9Y448 316 aa8.81□□□□□ -1
HMGN1P16-201ENST00000508308 SCN11AQ9UI33 1791 aa8.81□□□□□ -1
HMGN1P16-201ENST00000508308 TJP1Q07157 1748 aa8.8□□□□□ -1
HMGN1P16-201ENST00000508308 HSP90AB1P08238 724 aaKnown RBP8.8□□□□□ -1
HMGN1P16-201ENST00000508308 ARHGEF1Q92888 912 aaKnown RBP8.8□□□□□ -1
HMGN1P16-201ENST00000508308 WWC3Q9ULE0 1092 aa8.8□□□□□ -1
HMGN1P16-201ENST00000508308 ADCY9O60503 1353 aa8.8□□□□□ -1
HMGN1P16-201ENST00000508308 ADAMTS7Q9UKP4 1686 aa8.8□□□□□ -1
HMGN1P16-201ENST00000508308 C4AP0C0L4 1744 aa8.8□□□□□ -1
HMGN1P16-201ENST00000508308 CICQ96RK0 1608 aaPredicted RBP8.8□□□□□ -1
HMGN1P16-201ENST00000508308 CNTNAP4Q9C0A0 1308 aa8.8□□□□□ -1
HMGN1P16-201ENST00000508308 PTCD1O75127 700 aaKnown RBP8.79□□□□□ -1
HMGN1P16-201ENST00000508308 RPS6KA4O75676 772 aa8.79□□□□□ -1
HMGN1P16-201ENST00000508308 MMP10P09238 476 aa8.79□□□□□ -1
HMGN1P16-201ENST00000508308 GYS1P13807 737 aa8.79□□□□□ -1
HMGN1P16-201ENST00000508308 MTHFSP49914 203 aa8.79□□□□□ -1
HMGN1P16-201ENST00000508308 CABP4P57796 275 aa8.79□□□□□ -1
HMGN1P16-201ENST00000508308 TRAPPC3LQ5T215 181 aa8.79□□□□□ -1
HMGN1P16-201ENST00000508308 LGR6Q9HBX8 967 aa8.79□□□□□ -1
HMGN1P16-201ENST00000508308 VIRMAQ69YN4 1812 aaKnown RBP8.79□□□□□ -1
HMGN1P16-201ENST00000508308 ATP10DQ9P241 1426 aa8.79□□□□□ -1
HMGN1P16-201ENST00000508308 N4BP2Q86UW6 1770 aaPredicted RBP8.78□□□□□ -1
HMGN1P16-201ENST00000508308 PXDNLA1KZ92 1463 aa8.78□□□□□ -1
HMGN1P16-201ENST00000508308 INTS5Q6P9B9 1019 aaKnown RBP8.78□□□□□ -1
HMGN1P16-201ENST00000508308 SLAIN1Q8ND83 568 aa8.78□□□□□ -1
HMGN1P16-201ENST00000508308 RTCBQ9Y3I0 505 aaKnown RBP8.78□□□□□ -1
HMGN1P16-201ENST00000508308 COL3A1P02461 1466 aaPredicted RBP8.77□□□□□ -1
HMGN1P16-201ENST00000508308 MRC1P22897 1456 aa8.77□□□□□ -1
HMGN1P16-201ENST00000508308 BRCA1P38398 1863 aaKnown RBP8.77□□□□□ -1.01
HMGN1P16-201ENST00000508308 HMOX1P09601 288 aa8.77□□□□□ -1.01
HMGN1P16-201ENST00000508308 CRKLP46109 303 aaKnown RBP8.77□□□□□ -1.01
HMGN1P16-201ENST00000508308 C1orf141Q5JVX7 400 aa8.77□□□□□ -1.01
HMGN1P16-201ENST00000508308 NLGN1Q8N2Q7 840 aa8.77□□□□□ -1.01
HMGN1P16-201ENST00000508308 SRP68Q9UHB9 627 aaKnown RBP8.77□□□□□ -1.01
HMGN1P16-201ENST00000508308 C10orf71Q711Q0 1435 aa8.77□□□□□ -1.01
HMGN1P16-201ENST00000508308 A0A0G2JLW4 131 aa8.76□□□□□ -1.01
HMGN1P16-201ENST00000508308 GIGYF1O75420 1035 aaPredicted RBP8.76□□□□□ -1.01
HMGN1P16-201ENST00000508308 KCNA3P22001 575 aa8.76□□□□□ -1.01
HMGN1P16-201ENST00000508308 MTHFSDQ2M296 383 aaKnown RBP8.76□□□□□ -1.01
HMGN1P16-201ENST00000508308 AKAP4Q5JQC9 854 aa8.76□□□□□ -1.01
HMGN1P16-201ENST00000508308 CC2D1BQ5T0F9 858 aaKnown RBP8.76□□□□□ -1.01
HMGN1P16-201ENST00000508308 SLC52A2Q9HAB3 445 aa8.76□□□□□ -1.01
HMGN1P16-201ENST00000508308 COLQQ9Y215 455 aaPredicted RBP8.76□□□□□ -1.01
HMGN1P16-201ENST00000508308 KCPQ6ZWJ8 1503 aa8.75□□□□□ -1.01
HMGN1P16-201ENST00000508308 SENP3-EIF4A1A0A087X0R7 540 aa8.75□□□□□ -1.01
HMGN1P16-201ENST00000508308 RNMTO43148 476 aaKnown RBP8.75□□□□□ -1.01
HMGN1P16-201ENST00000508308 DPEP1P16444 411 aa8.75□□□□□ -1.01
HMGN1P16-201ENST00000508308 RFC4P35249 363 aa8.75□□□□□ -1.01
HMGN1P16-201ENST00000508308 DDR1Q08345 913 aa8.75□□□□□ -1.01
HMGN1P16-201ENST00000508308 SLC39A6Q13433 755 aa8.75□□□□□ -1.01
HMGN1P16-201ENST00000508308 FKBP8Q14318 412 aa8.75□□□□□ -1.01
HMGN1P16-201ENST00000508308 DNAJC10Q8IXB1 793 aa8.75□□□□□ -1.01
HMGN1P16-201ENST00000508308 USP42Q9H9J4 1324 aaKnown RBP8.75□□□□□ -1.01
HMGN1P16-201ENST00000508308 NPC1L1Q9UHC9 1359 aa8.74□□□□□ -1.01
HMGN1P16-201ENST00000508308 UBR2Q8IWV8 1755 aa8.74□□□□□ -1.01
HMGN1P16-201ENST00000508308 DIAPH1O60610 1272 aaKnown RBP8.74□□□□□ -1.01
HMGN1P16-201ENST00000508308 CYP19A1P11511 503 aaPredicted RBP8.74□□□□□ -1.01
HMGN1P16-201ENST00000508308 TGFB2P61812 414 aa8.74□□□□□ -1.01
HMGN1P16-201ENST00000508308 TM4SF1P30408 202 aa8.73□□□□□ -1.01
HMGN1P16-201ENST00000508308 ZNF526Q8TF50 670 aaPredicted RBP8.73□□□□□ -1.01
HMGN1P16-201ENST00000508308 BMP2KQ9NSY1 1161 aaPredicted RBP8.73□□□□□ -1.01
HMGN1P16-201ENST00000508308 SOS1Q07889 1333 aaPredicted RBP8.73□□□□□ -1.01
HMGN1P16-201ENST00000508308 SIPA1L3O60292 1781 aaPredicted RBP8.72□□□□□ -1.01
HMGN1P16-201ENST00000508308 POLRMTO00411 1230 aaKnown RBP8.72□□□□□ -1.01
HMGN1P16-201ENST00000508308 IL17REQ8NFR9 667 aa8.72□□□□□ -1.01
HMGN1P16-201ENST00000508308 BCL2L12Q9HB09 334 aa8.72□□□□□ -1.01
HMGN1P16-201ENST00000508308 GPBP1L1Q9HC44 474 aaPredicted RBP8.72□□□□□ -1.01
HMGN1P16-201ENST00000508308 CCDC87Q9NVE4 849 aa8.72□□□□□ -1.01
HMGN1P16-201ENST00000508308 BCS1LQ9Y276 419 aa8.72□□□□□ -1.01
HMGN1P16-201ENST00000508308 PARP3Q9Y6F1 533 aa8.72□□□□□ -1.01
HMGN1P16-201ENST00000508308 AFDNP55196 1824 aaKnown RBP8.72□□□□□ -1.01
HMGN1P16-201ENST00000508308 ARFGEF1Q9Y6D6 1849 aa8.72□□□□□ -1.01
HMGN1P16-201ENST00000508308 KIF3CO14782 793 aa8.71□□□□□ -1.02
HMGN1P16-201ENST00000508308 SEC24BO95487 1268 aa8.71□□□□□ -1.02
HMGN1P16-201ENST00000508308 CNGB1Q14028 1251 aaPredicted RBP8.71□□□□□ -1.02
HMGN1P16-201ENST00000508308 USPL1Q5W0Q7 1092 aa8.71□□□□□ -1.02
HMGN1P16-201ENST00000508308 PHACTR3Q96KR7 559 aa8.71□□□□□ -1.02
HMGN1P16-201ENST00000508308 ZBTB1Q9Y2K1 713 aa8.71□□□□□ -1.02
HMGN1P16-201ENST00000508308 NRXN2Q9P2S2 1712 aa8.71□□□□□ -1.02
HMGN1P16-201ENST00000508308 CHRNA5P30532 468 aa8.7□□□□□ -1.02
HMGN1P16-201ENST00000508308 NFIXQ14938 502 aa8.7□□□□□ -1.02
HMGN1P16-201ENST00000508308 VSIG10Q8N0Z9 540 aa8.7□□□□□ -1.02
HMGN1P16-201ENST00000508308 ZNF496Q96IT1 587 aaPredicted RBP8.7□□□□□ -1.02
HMGN1P16-201ENST00000508308 KRTAP3-3Q9BYR6 98 aa8.7□□□□□ -1.02
HMGN1P16-201ENST00000508308 KRTAP3-2Q9BYR7 98 aa8.7□□□□□ -1.02
HMGN1P16-201ENST00000508308 NARFQ9UHQ1 456 aa8.7□□□□□ -1.02
HMGN1P16-201ENST00000508308 SBF1O95248 1867 aa8.7□□□□□ -1.02
HMGN1P16-201ENST00000508308 U2SURPO15042 1029 aaKnown RBP8.69□□□□□ -1.02
HMGN1P16-201ENST00000508308 FCHSD2O94868 740 aa8.69□□□□□ -1.02
HMGN1P16-201ENST00000508308 ARHGAP27Q6ZUM4 889 aa8.69□□□□□ -1.02
HMGN1P16-201ENST00000508308 MARVELD3Q96A59 401 aa8.69□□□□□ -1.02
HMGN1P16-201ENST00000508308 COL15A1P39059 1388 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms