RNA–Protein interactions for RNA: ENST00000507906.5

USP53-204, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 4

Gene USP53, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-204ENST00000507906 C16orf46Q6P387 395 aa6.63□□□□□ -1.35
USP53-204ENST00000507906 CYP2U1Q7Z449 544 aa6.63□□□□□ -1.35
USP53-204ENST00000507906 ZDHHC1Q8WTX9 485 aa6.63□□□□□ -1.35
USP53-204ENST00000507906 RNF19AQ9NV58 838 aa6.63□□□□□ -1.35
USP53-204ENST00000507906 FAM13AO94988 1023 aa6.62□□□□□ -1.35
USP53-204ENST00000507906 EIF1AXP47813 144 aaKnown RBP6.62□□□□□ -1.35
USP53-204ENST00000507906 POTEAQ6S8J7 498 aa6.62□□□□□ -1.35
USP53-204ENST00000507906 ATCAYQ86WG3 371 aa6.62□□□□□ -1.35
USP53-204ENST00000507906 RGL4Q8IZJ4 473 aa6.62□□□□□ -1.35
USP53-204ENST00000507906 AGBL1Q96MI9 1066 aa6.62□□□□□ -1.35
USP53-204ENST00000507906 KLF16Q9BXK1 252 aaPredicted RBP6.62□□□□□ -1.35
USP53-204ENST00000507906 PKD2L1Q9P0L9 805 aa6.62□□□□□ -1.35
USP53-204ENST00000507906 EML1O00423 815 aa6.61□□□□□ -1.35
USP53-204ENST00000507906 CDK2AP1O14519 115 aa6.61□□□□□ -1.35
USP53-204ENST00000507906 DGAT1O75907 488 aa6.61□□□□□ -1.35
USP53-204ENST00000507906 PRR20EP86478 221 aa6.61□□□□□ -1.35
USP53-204ENST00000507906 PRR20CP86479 221 aa6.61□□□□□ -1.35
USP53-204ENST00000507906 PRR20DP86480 221 aa6.61□□□□□ -1.35
USP53-204ENST00000507906 PRR20BP86481 221 aa6.61□□□□□ -1.35
USP53-204ENST00000507906 PRR20AP86496 221 aa6.61□□□□□ -1.35
USP53-204ENST00000507906 STAG2Q8N3U4 1231 aa6.61□□□□□ -1.35
USP53-204ENST00000507906 CNKSR1Q969H4 720 aa6.61□□□□□ -1.35
USP53-204ENST00000507906 RBCK1Q9BYM8 510 aa6.61□□□□□ -1.35
USP53-204ENST00000507906 FHDC1Q9C0D6 1143 aaPredicted RBP6.61□□□□□ -1.35
USP53-204ENST00000507906 PARP3Q9Y6F1 533 aa6.61□□□□□ -1.35
USP53-204ENST00000507906 ALDH1A1P00352 501 aa6.6□□□□□ -1.35
USP53-204ENST00000507906 DSC3Q14574 896 aa6.6□□□□□ -1.35
USP53-204ENST00000507906 LDLRAD1Q5T700 205 aa6.6□□□□□ -1.35
USP53-204ENST00000507906 KLRG1Q96E93 195 aa6.6□□□□□ -1.35
USP53-204ENST00000507906 SETDB2Q96T68 719 aa6.6□□□□□ -1.35
USP53-204ENST00000507906 ESYT1Q9BSJ8 1104 aa6.6□□□□□ -1.35
USP53-204ENST00000507906 ZFAND3Q9H8U3 227 aa6.6□□□□□ -1.35
USP53-204ENST00000507906 STIM2Q9P246 746 aa6.6□□□□□ -1.35
USP53-204ENST00000507906 DACH1Q9UI36 760 aa6.6□□□□□ -1.35
USP53-204ENST00000507906 TREHO43280 583 aa6.59□□□□□ -1.35
USP53-204ENST00000507906 ADH1AP07327 375 aa6.59□□□□□ -1.35
USP53-204ENST00000507906 CENPCQ03188 943 aa6.59□□□□□ -1.35
USP53-204ENST00000507906 NNTQ13423 1086 aa6.59□□□□□ -1.35
USP53-204ENST00000507906 TLR1Q15399 786 aa6.59□□□□□ -1.35
USP53-204ENST00000507906 ZNF326Q5BKZ1 582 aaKnown RBP6.59□□□□□ -1.35
USP53-204ENST00000507906 ESCO1Q5FWF5 840 aa6.59□□□□□ -1.35
USP53-204ENST00000507906 ZSCAN29Q8IWY8 852 aaPredicted RBP6.59□□□□□ -1.35
USP53-204ENST00000507906 ETFBKMTQ8IXQ9 262 aa6.59□□□□□ -1.35
USP53-204ENST00000507906 VTI1AQ96AJ9 217 aa6.59□□□□□ -1.35
USP53-204ENST00000507906 ITPKCQ96DU7 683 aa6.59□□□□□ -1.35
USP53-204ENST00000507906 NGLY1Q96IV0 654 aa6.59□□□□□ -1.35
USP53-204ENST00000507906 AAASQ9NRG9 546 aa6.59□□□□□ -1.35
USP53-204ENST00000507906 PGPEP1Q9NXJ5 209 aa6.59□□□□□ -1.35
USP53-204ENST00000507906 HCN4Q9Y3Q4 1203 aa6.59□□□□□ -1.35
USP53-204ENST00000507906 EMILIN1Q9Y6C2 1016 aa6.59□□□□□ -1.35
USP53-204ENST00000507906 J3QL48 77 aa6.58□□□□□ -1.36
USP53-204ENST00000507906 RECKO95980 971 aa6.58□□□□□ -1.36
USP53-204ENST00000507906 PSMA6P60900 246 aaKnown RBP6.58□□□□□ -1.36
USP53-204ENST00000507906 CLN3Q13286 438 aa6.58□□□□□ -1.36
USP53-204ENST00000507906 EAPPQ56P03 285 aaPredicted RBP6.58□□□□□ -1.36
USP53-204ENST00000507906 Q6ZVU0 165 aa6.58□□□□□ -1.36
USP53-204ENST00000507906 MYO19Q96H55 970 aa6.58□□□□□ -1.36
USP53-204ENST00000507906 KLK14Q9P0G3 267 aa6.58□□□□□ -1.36
USP53-204ENST00000507906 WWC3Q9ULE0 1092 aa6.58□□□□□ -1.36
USP53-204ENST00000507906 GPR182O15218 404 aa6.57□□□□□ -1.36
USP53-204ENST00000507906 VAMP1P23763 118 aa6.57□□□□□ -1.36
USP53-204ENST00000507906 NOS2P35228 1153 aa6.57□□□□□ -1.36
USP53-204ENST00000507906 PTGIRP43119 386 aa6.57□□□□□ -1.36
USP53-204ENST00000507906 FMR1Q06787 632 aaKnown RBP eCLIP6.57□□□□□ -1.36
USP53-204ENST00000507906 TEAD4Q15561 434 aa6.57□□□□□ -1.36
USP53-204ENST00000507906 L3MBTL2Q969R5 705 aa6.57□□□□□ -1.36
USP53-204ENST00000507906 FAM161BQ96MY7 647 aa6.57□□□□□ -1.36
USP53-204ENST00000507906 ZNF395Q9H8N7 513 aaPredicted RBP6.57□□□□□ -1.36
USP53-204ENST00000507906 BRPF3Q9ULD4 1205 aa6.57□□□□□ -1.36
USP53-204ENST00000507906 SERTM1A2A2V5 107 aa6.56□□□□□ -1.36
USP53-204ENST00000507906 MEN1O00255 615 aa6.56□□□□□ -1.36
USP53-204ENST00000507906 TCF3P15923 654 aa6.56□□□□□ -1.36
USP53-204ENST00000507906 HIRAP54198 1017 aaPredicted RBP6.56□□□□□ -1.36
USP53-204ENST00000507906 COL19A1Q14993 1142 aa6.56□□□□□ -1.36
USP53-204ENST00000507906 ALDH16A1Q8IZ83 802 aa6.56□□□□□ -1.36
USP53-204ENST00000507906 CYP4X1Q8N118 509 aa6.56□□□□□ -1.36
USP53-204ENST00000507906 C7orf43Q8WVR3 580 aa6.56□□□□□ -1.36
USP53-204ENST00000507906 FAM129BQ96TA1 746 aa6.56□□□□□ -1.36
USP53-204ENST00000507906 BCS1LQ9Y276 419 aa6.56□□□□□ -1.36
USP53-204ENST00000507906 NDUFB5O43674 189 aa6.55□□□□□ -1.36
USP53-204ENST00000507906 ZIC2O95409 532 aaPredicted RBP6.55□□□□□ -1.36
USP53-204ENST00000507906 TXLNAP40222 546 aa6.55□□□□□ -1.36
USP53-204ENST00000507906 RELBQ01201 579 aa6.55□□□□□ -1.36
USP53-204ENST00000507906 AAMPQ13685 434 aa6.55□□□□□ -1.36
USP53-204ENST00000507906 MRPL58Q14197 206 aaKnown RBP6.55□□□□□ -1.36
USP53-204ENST00000507906 PPARGC1BQ86YN6 1023 aaKnown RBP6.55□□□□□ -1.36
USP53-204ENST00000507906 BACH2Q9BYV9 841 aa6.55□□□□□ -1.36
USP53-204ENST00000507906 POLIQ9UNA4 740 aa6.55□□□□□ -1.36
USP53-204ENST00000507906 TIMP2P16035 220 aa6.54□□□□□ -1.36
USP53-204ENST00000507906 PLCB3Q01970 1234 aa6.54□□□□□ -1.36
USP53-204ENST00000507906 EHHADHQ08426 723 aa6.54□□□□□ -1.36
USP53-204ENST00000507906 DGKZQ13574 1117 aa6.54□□□□□ -1.36
USP53-204ENST00000507906 TMC1Q8TDI8 760 aa6.54□□□□□ -1.36
USP53-204ENST00000507906 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.54□□□□□ -1.366e-8■■■■■ 55.9
USP53-204ENST00000507906 CABP1Q9NZU7 370 aa6.54□□□□□ -1.36
USP53-204ENST00000507906 GMPR2Q9P2T1 348 aaKnown RBP6.54□□□□□ -1.36
USP53-204ENST00000507906 ZNF232Q9UNY5 417 aa6.54□□□□□ -1.36
USP53-204ENST00000507906 TTC24A2A3L6 582 aaPredicted RBP6.53□□□□□ -1.36
USP53-204ENST00000507906 WDR4P57081 412 aaKnown RBP6.53□□□□□ -1.36
USP53-204ENST00000507906 TSNAXIP1Q2TAA8 658 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms