RNA–Protein interactions for RNA: ENST00000507891.1

SH3TC1-213, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 5

Gene SH3TC1, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-213ENST00000507891 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.57■■□□□ 1.2
SH3TC1-213ENST00000507891 ZNF853P0CG23 659 aa22.57■■□□□ 1.2
SH3TC1-213ENST00000507891 SSFA2P28290 1259 aa22.57■■□□□ 1.2
SH3TC1-213ENST00000507891 KDM3BQ7LBC6 1761 aa22.56■■□□□ 1.2
SH3TC1-213ENST00000507891 GIGYF1O75420 1035 aaPredicted RBP22.56■■□□□ 1.2
SH3TC1-213ENST00000507891 TRAPPC3LQ5T215 181 aa22.56■■□□□ 1.2
SH3TC1-213ENST00000507891 MBIPQ9NS73 344 aa22.56■■□□□ 1.2
SH3TC1-213ENST00000507891 COL5A3P25940 1745 aaPredicted RBP22.56■■□□□ 1.2
SH3TC1-213ENST00000507891 CICQ96RK0 1608 aaPredicted RBP22.56■■□□□ 1.2
SH3TC1-213ENST00000507891 ZBTB7AO95365 584 aa22.55■■□□□ 1.2
SH3TC1-213ENST00000507891 CANXP27824 592 aaKnown RBP22.55■■□□□ 1.2
SH3TC1-213ENST00000507891 WDR63Q8IWG1 891 aa22.55■■□□□ 1.2
SH3TC1-213ENST00000507891 ZBTB1Q9Y2K1 713 aa22.55■■□□□ 1.2
SH3TC1-213ENST00000507891 A1BGP04217 495 aa22.54■■□□□ 1.2
SH3TC1-213ENST00000507891 SLC16A10Q8TF71 515 aa22.53■■□□□ 1.2
SH3TC1-213ENST00000507891 ARHGEF1Q92888 912 aaKnown RBP22.53■■□□□ 1.2
SH3TC1-213ENST00000507891 ATF5Q9Y2D1 282 aaPredicted RBP22.53■■□□□ 1.2
SH3TC1-213ENST00000507891 IL16Q14005 1332 aa22.53■■□□□ 1.2
SH3TC1-213ENST00000507891 ADRA2BP18089 450 aa22.52■■□□□ 1.2
SH3TC1-213ENST00000507891 RFC4P35249 363 aa22.51■■□□□ 1.19
SH3TC1-213ENST00000507891 KRT24Q2M2I5 525 aa22.51■■□□□ 1.19
SH3TC1-213ENST00000507891 MTFR1LQ9H019 292 aa22.51■■□□□ 1.19
SH3TC1-213ENST00000507891 SPON1Q9HCB6 807 aa22.51■■□□□ 1.19
SH3TC1-213ENST00000507891 TUBGCP6Q96RT7 1819 aa22.5■■□□□ 1.19
SH3TC1-213ENST00000507891 UBR3Q6ZT12 1888 aa22.5■■□□□ 1.19
SH3TC1-213ENST00000507891 QSER1Q2KHR3 1735 aa22.5■■□□□ 1.19
SH3TC1-213ENST00000507891 MYH14Q7Z406 1995 aaKnown RBP22.5■■□□□ 1.19
SH3TC1-213ENST00000507891 SOS1Q07889 1333 aaPredicted RBP22.5■■□□□ 1.19
SH3TC1-213ENST00000507891 CASZ1Q86V15 1759 aa22.5■■□□□ 1.19
SH3TC1-213ENST00000507891 EIF2S2P20042 333 aaKnown RBP22.49■■□□□ 1.19
SH3TC1-213ENST00000507891 PIP4K2AP48426 406 aaPredicted RBP22.49■■□□□ 1.19
SH3TC1-213ENST00000507891 TSR2Q969E8 191 aaKnown RBP22.49■■□□□ 1.19
SH3TC1-213ENST00000507891 ZNF330Q9Y3S2 320 aaPredicted RBP22.49■■□□□ 1.19
SH3TC1-213ENST00000507891 IL6STP40189 918 aaPredicted RBP22.48■■□□□ 1.19
SH3TC1-213ENST00000507891 EIF5P55010 431 aaKnown RBP22.47■■□□□ 1.19
SH3TC1-213ENST00000507891 DUSP27Q5VZP5 1158 aa22.47■■□□□ 1.19
SH3TC1-213ENST00000507891 NPM2Q86SE8 214 aaKnown RBP22.47■■□□□ 1.19
SH3TC1-213ENST00000507891 NBPF26B4DH59 902 aa22.46■■□□□ 1.19
SH3TC1-213ENST00000507891 ELL2O00472 640 aaPredicted RBP22.46■■□□□ 1.19
SH3TC1-213ENST00000507891 MSL1Q68DK7 614 aa22.46■■□□□ 1.19
SH3TC1-213ENST00000507891 NBPF10Q6P3W6 841 aaKnown RBP22.46■■□□□ 1.19
SH3TC1-213ENST00000507891 NBPF15Q8N660 670 aa22.46■■□□□ 1.19
SH3TC1-213ENST00000507891 ZNF521Q96K83 1311 aa22.46■■□□□ 1.19
SH3TC1-213ENST00000507891 A0A087WZG4 1122 aa22.45■■□□□ 1.18
SH3TC1-213ENST00000507891 NECTIN2Q92692 538 aa22.45■■□□□ 1.18
SH3TC1-213ENST00000507891 ARXQ96QS3 562 aa22.45■■□□□ 1.18
SH3TC1-213ENST00000507891 SPINK5Q9NQ38 1064 aaPredicted RBP22.45■■□□□ 1.18
SH3TC1-213ENST00000507891 SRP68Q9UHB9 627 aaKnown RBP22.45■■□□□ 1.18
SH3TC1-213ENST00000507891 COL15A1P39059 1388 aa22.45■■□□□ 1.18
SH3TC1-213ENST00000507891 ZPR1O75312 459 aa22.44■■□□□ 1.18
SH3TC1-213ENST00000507891 HOXB7P09629 217 aa22.44■■□□□ 1.18
SH3TC1-213ENST00000507891 C8orf58Q8NAV2 365 aa22.44■■□□□ 1.18
SH3TC1-213ENST00000507891 GOLGA2Q08379 1002 aa22.43■■□□□ 1.18
SH3TC1-213ENST00000507891 MYH16Q9H6N6 1097 aa22.43■■□□□ 1.18
SH3TC1-213ENST00000507891 USP42Q9H9J4 1324 aaKnown RBP22.42■■□□□ 1.18
SH3TC1-213ENST00000507891 FANCIQ9NVI1 1328 aa22.42■■□□□ 1.18
SH3TC1-213ENST00000507891 GYS1P13807 737 aa22.42■■□□□ 1.18
SH3TC1-213ENST00000507891 MYL6BP14649 208 aa22.42■■□□□ 1.18
SH3TC1-213ENST00000507891 POLD1P28340 1107 aa22.42■■□□□ 1.18
SH3TC1-213ENST00000507891 PTGER2P43116 358 aa22.42■■□□□ 1.18
SH3TC1-213ENST00000507891 NARFQ9UHQ1 456 aa22.42■■□□□ 1.18
SH3TC1-213ENST00000507891 TBC1D2BQ9UPU7 963 aa22.42■■□□□ 1.18
SH3TC1-213ENST00000507891 ERBB4Q15303 1308 aa22.41■■□□□ 1.18
SH3TC1-213ENST00000507891 HNRNPUQ00839 825 aaKnown RBP eCLIP22.41■■□□□ 1.18
SH3TC1-213ENST00000507891 HDGFL1Q5TGJ6 251 aa22.41■■□□□ 1.18
SH3TC1-213ENST00000507891 USPL1Q5W0Q7 1092 aa22.41■■□□□ 1.18
SH3TC1-213ENST00000507891 NLGN1Q8N2Q7 840 aa22.41■■□□□ 1.18
SH3TC1-213ENST00000507891 LAMB4A4D0S4 1761 aa22.4■■□□□ 1.18
SH3TC1-213ENST00000507891 DZIP3Q86Y13 1208 aaKnown RBP22.4■■□□□ 1.18
SH3TC1-213ENST00000507891 TSPYL6Q8N831 410 aa22.4■■□□□ 1.18
SH3TC1-213ENST00000507891 SGIP1Q9BQI5 828 aa22.4■■□□□ 1.18
SH3TC1-213ENST00000507891 PDIA6Q15084 440 aa22.39■■□□□ 1.17
SH3TC1-213ENST00000507891 PPP1R1BQ9UD71 204 aaPredicted RBP22.39■■□□□ 1.17
SH3TC1-213ENST00000507891 E9PSI1 815 aa22.38■■□□□ 1.17
SH3TC1-213ENST00000507891 ANXA1P04083 346 aa22.38■■□□□ 1.17
SH3TC1-213ENST00000507891 EXOSC9Q06265 439 aaKnown RBP22.38■■□□□ 1.17
SH3TC1-213ENST00000507891 FKBP8Q14318 412 aa22.37■■□□□ 1.17
SH3TC1-213ENST00000507891 PROSER3Q2NL68 480 aa22.37■■□□□ 1.17
SH3TC1-213ENST00000507891 TWISTNBQ3B726 338 aaPredicted RBP22.37■■□□□ 1.17
SH3TC1-213ENST00000507891 CHMP4AQ9BY43 222 aa22.37■■□□□ 1.17
SH3TC1-213ENST00000507891 DDX21Q9NR30 783 aaKnown RBP eCLIP22.37■■□□□ 1.17
SH3TC1-213ENST00000507891 CHPF2Q9P2E5 772 aa22.37■■□□□ 1.17
SH3TC1-213ENST00000507891 SLFN5Q08AF3 891 aa22.36■■□□□ 1.17
SH3TC1-213ENST00000507891 CDCA7LQ96GN5 454 aa22.36■■□□□ 1.17
SH3TC1-213ENST00000507891 BCL2L12Q9HB09 334 aa22.36■■□□□ 1.17
SH3TC1-213ENST00000507891 DBF4Q9UBU7 674 aaPredicted RBP22.36■■□□□ 1.17
SH3TC1-213ENST00000507891 C4AP0C0L4 1744 aa22.36■■□□□ 1.17
SH3TC1-213ENST00000507891 CAMTA2O94983 1202 aa22.35■■□□□ 1.17
SH3TC1-213ENST00000507891 MMP10P09238 476 aa22.35■■□□□ 1.17
SH3TC1-213ENST00000507891 LRP5O75197 1615 aa22.35■■□□□ 1.17
SH3TC1-213ENST00000507891 CCDC30Q5VVM6 783 aa22.34■■□□□ 1.17
SH3TC1-213ENST00000507891 TTLL7Q6ZT98 887 aa22.34■■□□□ 1.17
SH3TC1-213ENST00000507891 LRP10Q7Z4F1 713 aa22.34■■□□□ 1.17
SH3TC1-213ENST00000507891 KIF6Q6ZMV9 814 aa22.33■■□□□ 1.17
SH3TC1-213ENST00000507891 VAMP4O75379 141 aa22.32■■□□□ 1.16
SH3TC1-213ENST00000507891 AIMP1Q12904 312 aaKnown RBP22.32■■□□□ 1.16
SH3TC1-213ENST00000507891 COPS6Q7L5N1 327 aa22.32■■□□□ 1.16
SH3TC1-213ENST00000507891 HYPKQ9NX55 129 aa22.32■■□□□ 1.16
SH3TC1-213ENST00000507891 PARP3Q9Y6F1 533 aa22.32■■□□□ 1.16
SH3TC1-213ENST00000507891 TCERG1O14776 1098 aaKnown RBP22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms