RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-222ENST00000507459 MMP10P09238 476 aa18.66■□□□□ 0.58
CCHCR1-222ENST00000507459 GYS1P13807 737 aa18.66■□□□□ 0.58
CCHCR1-222ENST00000507459 NEUROD2Q15784 382 aa18.66■□□□□ 0.58
CCHCR1-222ENST00000507459 NLGN1Q8N2Q7 840 aa18.66■□□□□ 0.58
CCHCR1-222ENST00000507459 NLGN2Q8NFZ4 835 aa18.66■□□□□ 0.58
CCHCR1-222ENST00000507459 TEX13AQ9BXU3 409 aaPredicted RBP18.66■□□□□ 0.58
CCHCR1-222ENST00000507459 RRP7AQ9Y3A4 280 aaKnown RBP18.66■□□□□ 0.58
CCHCR1-222ENST00000507459 SOS1Q07889 1333 aaPredicted RBP18.65■□□□□ 0.58
CCHCR1-222ENST00000507459 ZPR1O75312 459 aa18.64■□□□□ 0.57
CCHCR1-222ENST00000507459 TMPOP42166 694 aaKnown RBP18.64■□□□□ 0.57
CCHCR1-222ENST00000507459 PELP1Q8IZL8 1130 aaKnown RBP18.64■□□□□ 0.57
CCHCR1-222ENST00000507459 RUNDC1Q96C34 613 aa18.64■□□□□ 0.57
CCHCR1-222ENST00000507459 ZNF330Q9Y3S2 320 aaPredicted RBP18.64■□□□□ 0.57
CCHCR1-222ENST00000507459 PRAMEF22A3QJZ6 481 aa18.63■□□□□ 0.57
CCHCR1-222ENST00000507459 A1BGP04217 495 aa18.63■□□□□ 0.57
CCHCR1-222ENST00000507459 USP42Q9H9J4 1324 aaKnown RBP18.63■□□□□ 0.57
CCHCR1-222ENST00000507459 C4AP0C0L4 1744 aa18.63■□□□□ 0.57
CCHCR1-222ENST00000507459 ANP32CO43423 234 aa18.62■□□□□ 0.57
CCHCR1-222ENST00000507459 SNRPA1P09661 255 aaKnown RBP18.62■□□□□ 0.57
CCHCR1-222ENST00000507459 FKBP8Q14318 412 aa18.62■□□□□ 0.57
CCHCR1-222ENST00000507459 GPR162Q16538 588 aa18.62■□□□□ 0.57
CCHCR1-222ENST00000507459 USPL1Q5W0Q7 1092 aa18.62■□□□□ 0.57
CCHCR1-222ENST00000507459 PNISRQ8TF01 805 aaKnown RBP18.62■□□□□ 0.57
CCHCR1-222ENST00000507459 CD2APQ9Y5K6 639 aa18.62■□□□□ 0.57
CCHCR1-222ENST00000507459 USP16Q9Y5T5 823 aa18.62■□□□□ 0.57
CCHCR1-222ENST00000507459 COL15A1P39059 1388 aa18.62■□□□□ 0.57
CCHCR1-222ENST00000507459 CCDC184Q52MB2 194 aa18.61■□□□□ 0.57
CCHCR1-222ENST00000507459 PARP3Q9Y6F1 533 aa18.61■□□□□ 0.57
CCHCR1-222ENST00000507459 PIP4K2AP48426 406 aaPredicted RBP18.6■□□□□ 0.57
CCHCR1-222ENST00000507459 EIF5P55010 431 aaKnown RBP18.6■□□□□ 0.57
CCHCR1-222ENST00000507459 LMOD3Q0VAK6 560 aa18.6■□□□□ 0.57
CCHCR1-222ENST00000507459 NPM2Q86SE8 214 aaKnown RBP18.6■□□□□ 0.57
CCHCR1-222ENST00000507459 NARFQ9UHQ1 456 aa18.6■□□□□ 0.57
CCHCR1-222ENST00000507459 A0A087WZG4 1122 aa18.58■□□□□ 0.56
CCHCR1-222ENST00000507459 TSPYL4Q9UJ04 414 aa18.58■□□□□ 0.56
CCHCR1-222ENST00000507459 TBC1D2BQ9UPU7 963 aa18.58■□□□□ 0.56
CCHCR1-222ENST00000507459 IL6STP40189 918 aaPredicted RBP18.57■□□□□ 0.56
CCHCR1-222ENST00000507459 EIF4A1P60842 406 aaKnown RBP18.57■□□□□ 0.56
CCHCR1-222ENST00000507459 WWC3Q9ULE0 1092 aa18.57■□□□□ 0.56
CCHCR1-222ENST00000507459 UTRNP46939 3433 aa18.56■□□□□ 0.56
CCHCR1-222ENST00000507459 DDR1Q08345 913 aa18.56■□□□□ 0.56
CCHCR1-222ENST00000507459 APAF1O14727 1248 aa18.55■□□□□ 0.56
CCHCR1-222ENST00000507459 BCL2L12Q9HB09 334 aa18.55■□□□□ 0.56
CCHCR1-222ENST00000507459 MRS2Q9HD23 443 aa18.55■□□□□ 0.56
CCHCR1-222ENST00000507459 TRIM35Q9UPQ4 493 aa18.55■□□□□ 0.56
CCHCR1-222ENST00000507459 LAS1LQ9Y4W2 734 aaKnown RBP18.55■□□□□ 0.56
CCHCR1-222ENST00000507459 GOLGB1Q14789 3259 aaKnown RBP18.54■□□□□ 0.56
CCHCR1-222ENST00000507459 GIGYF1O75420 1035 aaPredicted RBP18.54■□□□□ 0.56
CCHCR1-222ENST00000507459 TM4SF1P30408 202 aa18.54■□□□□ 0.56
CCHCR1-222ENST00000507459 NFIXQ14938 502 aa18.54■□□□□ 0.56
CCHCR1-222ENST00000507459 BICDL1Q6ZP65 573 aa18.54■□□□□ 0.56
CCHCR1-222ENST00000507459 KDM3BQ7LBC6 1761 aa18.54■□□□□ 0.56
CCHCR1-222ENST00000507459 POLRMTO00411 1230 aaKnown RBP18.53■□□□□ 0.56
CCHCR1-222ENST00000507459 YBX3P16989 372 aaKnown RBP eCLIP18.53■□□□□ 0.56
CCHCR1-222ENST00000507459 YY1P25490 414 aa18.53■□□□□ 0.56
CCHCR1-222ENST00000507459 NBPF26B4DH59 902 aa18.52■□□□□ 0.56
CCHCR1-222ENST00000507459 NBPF10Q6P3W6 841 aaKnown RBP18.52■□□□□ 0.56
CCHCR1-222ENST00000507459 DZIP3Q86Y13 1208 aaKnown RBP18.52■□□□□ 0.56
CCHCR1-222ENST00000507459 NBPF15Q8N660 670 aa18.52■□□□□ 0.56
CCHCR1-222ENST00000507459 SENP3-EIF4A1A0A087X0R7 540 aa18.51■□□□□ 0.55
CCHCR1-222ENST00000507459 A0A0G2JLW4 131 aa18.51■□□□□ 0.55
CCHCR1-222ENST00000507459 NGEFQ8N5V2 710 aa18.51■□□□□ 0.55
CCHCR1-222ENST00000507459 C10orf71Q711Q0 1435 aa18.5■□□□□ 0.55
CCHCR1-222ENST00000507459 TGFB2P61812 414 aa18.5■□□□□ 0.55
CCHCR1-222ENST00000507459 TBC1D9BQ66K14 1250 aa18.5■□□□□ 0.55
CCHCR1-222ENST00000507459 BABAM1Q9NWV8 329 aa18.5■□□□□ 0.55
CCHCR1-222ENST00000507459 CAMTA2O94983 1202 aa18.49■□□□□ 0.55
CCHCR1-222ENST00000507459 SERPINB2P05120 415 aa18.49■□□□□ 0.55
CCHCR1-222ENST00000507459 DPEP1P16444 411 aa18.49■□□□□ 0.55
CCHCR1-222ENST00000507459 EIF2S2P20042 333 aaKnown RBP18.49■□□□□ 0.55
CCHCR1-222ENST00000507459 CHL1O00533 1208 aa18.48■□□□□ 0.55
CCHCR1-222ENST00000507459 GRIN3BO60391 1043 aa18.48■□□□□ 0.55
CCHCR1-222ENST00000507459 MYL6BP14649 208 aa18.48■□□□□ 0.55
CCHCR1-222ENST00000507459 PXDNLA1KZ92 1463 aa18.47■□□□□ 0.55
CCHCR1-222ENST00000507459 N4BP2Q86UW6 1770 aaPredicted RBP18.47■□□□□ 0.55
CCHCR1-222ENST00000507459 KIF13BQ9NQT8 1826 aa18.46■□□□□ 0.55
CCHCR1-222ENST00000507459 LAMB4A4D0S4 1761 aa18.46■□□□□ 0.55
CCHCR1-222ENST00000507459 KRT24Q2M2I5 525 aa18.46■□□□□ 0.55
CCHCR1-222ENST00000507459 NECTIN2Q92692 538 aa18.46■□□□□ 0.55
CCHCR1-222ENST00000507459 SETDB2Q96T68 719 aa18.46■□□□□ 0.55
CCHCR1-222ENST00000507459 CHRNA5P30532 468 aa18.45■□□□□ 0.54
CCHCR1-222ENST00000507459 BCS1LQ9Y276 419 aa18.45■□□□□ 0.54
CCHCR1-222ENST00000507459 SCN7AQ01118 1682 aa18.44■□□□□ 0.54
CCHCR1-222ENST00000507459 NPHP1O15259 732 aa18.44■□□□□ 0.54
CCHCR1-222ENST00000507459 CCDC24Q8N4L8 307 aa18.44■□□□□ 0.54
CCHCR1-222ENST00000507459 CFAP44Q96MT7 982 aa18.44■□□□□ 0.54
CCHCR1-222ENST00000507459 ZNF652Q9Y2D9 606 aa18.44■□□□□ 0.54
CCHCR1-222ENST00000507459 AFDNP55196 1824 aaKnown RBP18.44■□□□□ 0.54
CCHCR1-222ENST00000507459 KCNA3P22001 575 aa18.43■□□□□ 0.54
CCHCR1-222ENST00000507459 CARMIL3Q8ND23 1372 aa18.42■□□□□ 0.54
CCHCR1-222ENST00000507459 ANXA1P04083 346 aa18.42■□□□□ 0.54
CCHCR1-222ENST00000507459 CALD1Q05682 793 aaKnown RBP18.42■□□□□ 0.54
CCHCR1-222ENST00000507459 HLFQ16534 295 aa18.42■□□□□ 0.54
CCHCR1-222ENST00000507459 CLEC4GQ6UXB4 293 aa18.42■□□□□ 0.54
CCHCR1-222ENST00000507459 KIF6Q6ZMV9 814 aa18.42■□□□□ 0.54
CCHCR1-222ENST00000507459 TTLL7Q6ZT98 887 aa18.42■□□□□ 0.54
CCHCR1-222ENST00000507459 FAM9BQ8IZU0 186 aa18.42■□□□□ 0.54
CCHCR1-222ENST00000507459 MBIPQ9NS73 344 aa18.42■□□□□ 0.54
CCHCR1-222ENST00000507459 PIM2Q9P1W9 311 aa18.42■□□□□ 0.54
CCHCR1-222ENST00000507459 CHD4Q14839 1912 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms