RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 FHDC1Q9C0D6 1143 aaPredicted RBP6.25□□□□□ -1.41
LSM6-205ENST00000507449 IQSEC3Q9UPP2 1182 aaPredicted RBP6.25□□□□□ -1.41
LSM6-205ENST00000507449 A6NJY4 79 aa6.24□□□□□ -1.41
LSM6-205ENST00000507449 IGFBP4P22692 258 aa6.24□□□□□ -1.41
LSM6-205ENST00000507449 ARID4AP29374 1257 aaPredicted RBP6.24□□□□□ -1.41
LSM6-205ENST00000507449 RELBQ01201 579 aa6.24□□□□□ -1.41
LSM6-205ENST00000507449 SLC9A9Q8IVB4 645 aa6.24□□□□□ -1.41
LSM6-205ENST00000507449 SCG3Q8WXD2 468 aaKnown RBP6.24□□□□□ -1.41
LSM6-205ENST00000507449 ZNF395Q9H8N7 513 aaPredicted RBP6.24□□□□□ -1.41
LSM6-205ENST00000507449 SCHIP1Q9P0W5 487 aaPredicted RBP6.24□□□□□ -1.41
LSM6-205ENST00000507449 SEPT3Q9UH03 358 aa6.24□□□□□ -1.41
LSM6-205ENST00000507449 ATAD2Q6PL18 1390 aa6.23□□□□□ -1.41
LSM6-205ENST00000507449 MKNK1Q9BUB5 465 aa6.23□□□□□ -1.41
LSM6-205ENST00000507449 CENPCQ03188 943 aa6.22□□□□□ -1.41
LSM6-205ENST00000507449 TLR1Q15399 786 aa6.22□□□□□ -1.41
LSM6-205ENST00000507449 POTEAQ6S8J7 498 aa6.22□□□□□ -1.41
LSM6-205ENST00000507449 CCER1Q8TC90 406 aaPredicted RBP6.22□□□□□ -1.41
LSM6-205ENST00000507449 ADAMTS8Q9UP79 889 aa6.22□□□□□ -1.41
LSM6-205ENST00000507449 MEN1O00255 615 aa6.21□□□□□ -1.42
LSM6-205ENST00000507449 CDK2AP1O14519 115 aa6.21□□□□□ -1.42
LSM6-205ENST00000507449 CAPN5O15484 640 aaPredicted RBP6.21□□□□□ -1.42
LSM6-205ENST00000507449 FOXO3O43524 673 aa6.21□□□□□ -1.42
LSM6-205ENST00000507449 ADAM23O75077 832 aa6.21□□□□□ -1.42
LSM6-205ENST00000507449 SH3PXD2AQ5TCZ1 1133 aa6.21□□□□□ -1.42
LSM6-205ENST00000507449 SND1Q7KZF4 910 aaKnown RBP eCLIP6.21□□□□□ -1.42
LSM6-205ENST00000507449 ZDHHC1Q8WTX9 485 aa6.21□□□□□ -1.42
LSM6-205ENST00000507449 C2orf49Q9BVC5 232 aaPredicted RBP6.21□□□□□ -1.42
LSM6-205ENST00000507449 SOWAHDA6NJG2 315 aa6.2□□□□□ -1.42
LSM6-205ENST00000507449 PPP1R12BO60237 982 aaPredicted RBP6.2□□□□□ -1.42
LSM6-205ENST00000507449 ZNF211Q13398 564 aaPredicted RBP6.2□□□□□ -1.42
LSM6-205ENST00000507449 TMCO4Q5TGY1 634 aa6.2□□□□□ -1.42
LSM6-205ENST00000507449 LINC00528Q8N1L1 170 aa6.2□□□□□ -1.42
LSM6-205ENST00000507449 COL26A1Q96A83 441 aa6.2□□□□□ -1.42
LSM6-205ENST00000507449 INSM2Q96T92 566 aaPredicted RBP6.2□□□□□ -1.42
LSM6-205ENST00000507449 SPINT1O43278 529 aa6.19□□□□□ -1.42
LSM6-205ENST00000507449 IRS1P35568 1242 aa6.19□□□□□ -1.42
LSM6-205ENST00000507449 MFAP1P55081 439 aaKnown RBP6.19□□□□□ -1.42
LSM6-205ENST00000507449 MTMR3Q13615 1198 aa6.19□□□□□ -1.42
LSM6-205ENST00000507449 SCARF1Q14162 830 aa6.19□□□□□ -1.42
LSM6-205ENST00000507449 NAA30Q147X3 362 aaPredicted RBP6.19□□□□□ -1.42
LSM6-205ENST00000507449 ECM1Q16610 540 aa6.19□□□□□ -1.42
LSM6-205ENST00000507449 FOXD4L5Q5VV16 416 aaPredicted RBP6.19□□□□□ -1.42
LSM6-205ENST00000507449 STAG2Q8N3U4 1231 aa6.19□□□□□ -1.42
LSM6-205ENST00000507449 GTF3C2Q8WUA4 911 aaPredicted RBP6.19□□□□□ -1.42
LSM6-205ENST00000507449 CHMP7Q8WUX9 453 aaPredicted RBP6.19□□□□□ -1.42
LSM6-205ENST00000507449 TSEN34Q9BSV6 310 aaKnown RBP6.19□□□□□ -1.42
LSM6-205ENST00000507449 GRIP2Q9C0E4 1043 aa6.19□□□□□ -1.42
LSM6-205ENST00000507449 SAP130Q9H0E3 1048 aa6.19□□□□□ -1.42
LSM6-205ENST00000507449 ANO2Q9NQ90 1003 aa6.19□□□□□ -1.42
LSM6-205ENST00000507449 EML1O00423 815 aa6.18□□□□□ -1.42
LSM6-205ENST00000507449 PTCD1O75127 700 aaKnown RBP6.18□□□□□ -1.42
LSM6-205ENST00000507449 CTSOP43234 321 aaPredicted RBP6.18□□□□□ -1.42
LSM6-205ENST00000507449 RNF144AP50876 292 aaPredicted RBP6.18□□□□□ -1.42
LSM6-205ENST00000507449 MARSP56192 900 aaKnown RBP6.18□□□□□ -1.42
LSM6-205ENST00000507449 PSMA6P60900 246 aaKnown RBP6.18□□□□□ -1.42
LSM6-205ENST00000507449 PPARGC1BQ86YN6 1023 aaKnown RBP6.18□□□□□ -1.42
LSM6-205ENST00000507449 NLRP3Q96P20 1036 aa6.18□□□□□ -1.42
LSM6-205ENST00000507449 KRTAP9-2Q9BYQ4 174 aa6.18□□□□□ -1.42
LSM6-205ENST00000507449 QTRT2Q9H974 415 aaKnown RBP6.18□□□□□ -1.42
LSM6-205ENST00000507449 EGFL7Q9UHF1 273 aa6.18□□□□□ -1.42
LSM6-205ENST00000507449 CCDC9Q9Y3X0 531 aaKnown RBP6.18□□□□□ -1.42
LSM6-205ENST00000507449 BTBD11A6QL63 1104 aa6.17□□□□□ -1.42
LSM6-205ENST00000507449 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.17□□□□□ -1.42
LSM6-205ENST00000507449 MSTNO14793 375 aa6.17□□□□□ -1.42
LSM6-205ENST00000507449 ICMTO60725 284 aa6.17□□□□□ -1.42
LSM6-205ENST00000507449 ABL1P00519 1130 aa6.17□□□□□ -1.42
LSM6-205ENST00000507449 BMP1P13497 986 aa6.17□□□□□ -1.42
LSM6-205ENST00000507449 GPC1P35052 558 aa6.17□□□□□ -1.42
LSM6-205ENST00000507449 TEAD4Q15561 434 aa6.17□□□□□ -1.42
LSM6-205ENST00000507449 TRIM46Q7Z4K8 759 aa6.17□□□□□ -1.42
LSM6-205ENST00000507449 KRTAP1-3Q8IUG1 177 aa6.17□□□□□ -1.42
LSM6-205ENST00000507449 RGS22Q8NE09 1264 aa6.17□□□□□ -1.42
LSM6-205ENST00000507449 SCARF2Q96GP6 870 aaPredicted RBP6.17□□□□□ -1.42
LSM6-205ENST00000507449 ZSCAN10Q96SZ4 725 aaPredicted RBP6.17□□□□□ -1.42
LSM6-205ENST00000507449 PARP3Q9Y6F1 533 aa6.17□□□□□ -1.42
LSM6-205ENST00000507449 H3BRB1 525 aa6.16□□□□□ -1.42
LSM6-205ENST00000507449 TNFRSF10BO14763 440 aa6.16□□□□□ -1.42
LSM6-205ENST00000507449 NOS2P35228 1153 aa6.16□□□□□ -1.42
LSM6-205ENST00000507449 HIRAP54198 1017 aaPredicted RBP6.16□□□□□ -1.42
LSM6-205ENST00000507449 NOM1Q5C9Z4 860 aaKnown RBP6.16□□□□□ -1.42
LSM6-205ENST00000507449 COX20Q5RI15 118 aa6.16□□□□□ -1.42
LSM6-205ENST00000507449 MRPL14Q6P1L8 145 aaKnown RBP6.16□□□□□ -1.42
LSM6-205ENST00000507449 NBPF15Q8N660 670 aa6.16□□□□□ -1.42
LSM6-205ENST00000507449 TUT1Q9H6E5 874 aaKnown RBP6.16□□□□□ -1.42
LSM6-205ENST00000507449 LRFN2Q9ULH4 789 aa6.16□□□□□ -1.42
LSM6-205ENST00000507449 SERTM1A2A2V5 107 aa6.15□□□□□ -1.42
LSM6-205ENST00000507449 C4orf17Q53FE4 359 aa6.15□□□□□ -1.42
LSM6-205ENST00000507449 FAM26DQ5JW98 314 aa6.15□□□□□ -1.42
LSM6-205ENST00000507449 C6orf118Q5T5N4 469 aa6.15□□□□□ -1.42
LSM6-205ENST00000507449 RNF217Q8TC41 542 aa6.15□□□□□ -1.42
LSM6-205ENST00000507449 HELQQ8TDG4 1101 aa6.15□□□□□ -1.42
LSM6-205ENST00000507449 RHBDD1Q8TEB9 315 aa6.15□□□□□ -1.42
LSM6-205ENST00000507449 L3MBTL2Q969R5 705 aa6.15□□□□□ -1.42
LSM6-205ENST00000507449 POLMQ9NP87 494 aaPredicted RBP6.15□□□□□ -1.42
LSM6-205ENST00000507449 CABP1Q9NZU7 370 aa6.15□□□□□ -1.42
LSM6-205ENST00000507449 MTMR7Q9Y216 660 aa6.15□□□□□ -1.42
LSM6-205ENST00000507449 KRTAP9-6A0A140TA67 174 aa6.14□□□□□ -1.43
LSM6-205ENST00000507449 SPATA31C2B4DYI2 1134 aa6.14□□□□□ -1.43
LSM6-205ENST00000507449 BMP2P12643 396 aa6.14□□□□□ -1.43
LSM6-205ENST00000507449 TXLNAP40222 546 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms