RNA–Protein interactions for RNA: ENST00000506963.1

SFXN1-205, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-205ENST00000506963 INTS5Q6P9B9 1019 aaKnown RBP12.67□□□□□ -0.38
SFXN1-205ENST00000506963 FLAD1Q8NFF5 587 aa12.67□□□□□ -0.38
SFXN1-205ENST00000506963 CCDC87Q9NVE4 849 aa12.67□□□□□ -0.38
SFXN1-205ENST00000506963 SOS1Q07889 1333 aaPredicted RBP12.66□□□□□ -0.38
SFXN1-205ENST00000506963 PNPLA7Q6ZV29 1317 aa12.66□□□□□ -0.38
SFXN1-205ENST00000506963 R3HDM1Q15032 1099 aaKnown RBP12.66□□□□□ -0.38
SFXN1-205ENST00000506963 AK7Q96M32 723 aa12.66□□□□□ -0.38
SFXN1-205ENST00000506963 TFCP2L1Q9NZI6 479 aa12.66□□□□□ -0.38
SFXN1-205ENST00000506963 USP16Q9Y5T5 823 aa12.66□□□□□ -0.38
SFXN1-205ENST00000506963 ERBB4Q15303 1308 aa12.65□□□□□ -0.38
SFXN1-205ENST00000506963 GNPATO15228 680 aa12.65□□□□□ -0.38
SFXN1-205ENST00000506963 COL24A1Q17RW2 1714 aa12.65□□□□□ -0.38
SFXN1-205ENST00000506963 SENP3-EIF4A1A0A087X0R7 540 aa12.64□□□□□ -0.39
SFXN1-205ENST00000506963 PRAMEF22A3QJZ6 481 aa12.64□□□□□ -0.39
SFXN1-205ENST00000506963 AMIGO3Q86WK7 504 aa12.64□□□□□ -0.39
SFXN1-205ENST00000506963 SLC16A10Q8TF71 515 aa12.64□□□□□ -0.39
SFXN1-205ENST00000506963 RTCBQ9Y3I0 505 aaKnown RBP12.64□□□□□ -0.39
SFXN1-205ENST00000506963 SALL2Q9Y467 1007 aaPredicted RBP12.64□□□□□ -0.39
SFXN1-205ENST00000506963 LAS1LQ9Y4W2 734 aaKnown RBP12.64□□□□□ -0.39
SFXN1-205ENST00000506963 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.63□□□□□ -0.39
SFXN1-205ENST00000506963 PSDA5PKW4 1024 aaPredicted RBP12.63□□□□□ -0.39
SFXN1-205ENST00000506963 IL6STP40189 918 aaPredicted RBP12.63□□□□□ -0.39
SFXN1-205ENST00000506963 EIF5P55010 431 aaKnown RBP12.63□□□□□ -0.39
SFXN1-205ENST00000506963 GOLGA2Q08379 1002 aa12.63□□□□□ -0.39
SFXN1-205ENST00000506963 COL23A1Q86Y22 540 aaPredicted RBP12.63□□□□□ -0.39
SFXN1-205ENST00000506963 MYH16Q9H6N6 1097 aa12.63□□□□□ -0.39
SFXN1-205ENST00000506963 SPINK5Q9NQ38 1064 aaPredicted RBP12.63□□□□□ -0.39
SFXN1-205ENST00000506963 ZBTB1Q9Y2K1 713 aa12.63□□□□□ -0.39
SFXN1-205ENST00000506963 FANCIQ9NVI1 1328 aa12.62□□□□□ -0.39
SFXN1-205ENST00000506963 C4AP0C0L4 1744 aa12.62□□□□□ -0.39
SFXN1-205ENST00000506963 E9PSI1 815 aa12.62□□□□□ -0.39
SFXN1-205ENST00000506963 TRAPPC3LQ5T215 181 aa12.62□□□□□ -0.39
SFXN1-205ENST00000506963 CHMP4AQ9BY43 222 aa12.62□□□□□ -0.39
SFXN1-205ENST00000506963 NBPF26B4DH59 902 aa12.61□□□□□ -0.39
SFXN1-205ENST00000506963 RGL2O15211 777 aa12.61□□□□□ -0.39
SFXN1-205ENST00000506963 A1BGP04217 495 aa12.61□□□□□ -0.39
SFXN1-205ENST00000506963 SLFN5Q08AF3 891 aa12.61□□□□□ -0.39
SFXN1-205ENST00000506963 KRT24Q2M2I5 525 aa12.61□□□□□ -0.39
SFXN1-205ENST00000506963 DUSP27Q5VZP5 1158 aa12.61□□□□□ -0.39
SFXN1-205ENST00000506963 NBPF10Q6P3W6 841 aaKnown RBP12.61□□□□□ -0.39
SFXN1-205ENST00000506963 TRMT2AQ8IZ69 625 aaKnown RBP12.61□□□□□ -0.39
SFXN1-205ENST00000506963 NBPF15Q8N660 670 aa12.61□□□□□ -0.39
SFXN1-205ENST00000506963 TSR2Q969E8 191 aaKnown RBP12.61□□□□□ -0.39
SFXN1-205ENST00000506963 PDGFDQ9GZP0 370 aaPredicted RBP12.61□□□□□ -0.39
SFXN1-205ENST00000506963 COL15A1P39059 1388 aa12.6□□□□□ -0.39
SFXN1-205ENST00000506963 A0A087WZG4 1122 aa12.6□□□□□ -0.39
SFXN1-205ENST00000506963 HNRNPUQ00839 825 aaKnown RBP eCLIP12.6□□□□□ -0.39
SFXN1-205ENST00000506963 C8orf58Q8NAV2 365 aa12.6□□□□□ -0.39
SFXN1-205ENST00000506963 ARHGEF1Q92888 912 aaKnown RBP12.6□□□□□ -0.39
SFXN1-205ENST00000506963 MTFR1LQ9H019 292 aa12.6□□□□□ -0.39
SFXN1-205ENST00000506963 ZBED9Q6R2W3 1325 aa12.6□□□□□ -0.39
SFXN1-205ENST00000506963 LRP5O75197 1615 aa12.59□□□□□ -0.39
SFXN1-205ENST00000506963 CANXP27824 592 aaKnown RBP12.59□□□□□ -0.39
SFXN1-205ENST00000506963 PDIA6Q15084 440 aa12.59□□□□□ -0.39
SFXN1-205ENST00000506963 LRP10Q7Z4F1 713 aa12.59□□□□□ -0.39
SFXN1-205ENST00000506963 NARFQ9UHQ1 456 aa12.59□□□□□ -0.39
SFXN1-205ENST00000506963 CACNA1FO60840 1977 aa12.59□□□□□ -0.39
SFXN1-205ENST00000506963 USP42Q9H9J4 1324 aaKnown RBP12.59□□□□□ -0.39
SFXN1-205ENST00000506963 PHF14O94880 888 aa12.58□□□□□ -0.4
SFXN1-205ENST00000506963 HDGFL1Q5TGJ6 251 aa12.58□□□□□ -0.4
SFXN1-205ENST00000506963 TSPYL6Q8N831 410 aa12.58□□□□□ -0.4
SFXN1-205ENST00000506963 SGIP1Q9BQI5 828 aa12.58□□□□□ -0.4
SFXN1-205ENST00000506963 DDX21Q9NR30 783 aaKnown RBP eCLIP12.58□□□□□ -0.4
SFXN1-205ENST00000506963 SCN7AQ01118 1682 aa12.57□□□□□ -0.4
SFXN1-205ENST00000506963 BCORQ6W2J9 1755 aa12.57□□□□□ -0.4
SFXN1-205ENST00000506963 RFC4P35249 363 aa12.57□□□□□ -0.4
SFXN1-205ENST00000506963 TWISTNBQ3B726 338 aaPredicted RBP12.57□□□□□ -0.4
SFXN1-205ENST00000506963 SMIM5Q71RC9 77 aa12.57□□□□□ -0.4
SFXN1-205ENST00000506963 DBF4Q9UBU7 674 aaPredicted RBP12.57□□□□□ -0.4
SFXN1-205ENST00000506963 VAMP4O75379 141 aa12.56□□□□□ -0.4
SFXN1-205ENST00000506963 GYS1P13807 737 aa12.56□□□□□ -0.4
SFXN1-205ENST00000506963 EIF2S2P20042 333 aaKnown RBP12.56□□□□□ -0.4
SFXN1-205ENST00000506963 EXOSC9Q06265 439 aaKnown RBP12.56□□□□□ -0.4
SFXN1-205ENST00000506963 NLGN1Q8N2Q7 840 aa12.56□□□□□ -0.4
SFXN1-205ENST00000506963 CDCA7LQ96GN5 454 aa12.56□□□□□ -0.4
SFXN1-205ENST00000506963 SPON1Q9HCB6 807 aa12.56□□□□□ -0.4
SFXN1-205ENST00000506963 ELL2O00472 640 aaPredicted RBP12.55□□□□□ -0.4
SFXN1-205ENST00000506963 ZPR1O75312 459 aa12.55□□□□□ -0.4
SFXN1-205ENST00000506963 ZBTB7AO95365 584 aa12.55□□□□□ -0.4
SFXN1-205ENST00000506963 CT47B1P0C2W7 299 aaPredicted RBP12.55□□□□□ -0.4
SFXN1-205ENST00000506963 PTGER2P43116 358 aa12.55□□□□□ -0.4
SFXN1-205ENST00000506963 PIP4K2AP48426 406 aaPredicted RBP12.55□□□□□ -0.4
SFXN1-205ENST00000506963 CCDC30Q5VVM6 783 aa12.55□□□□□ -0.4
SFXN1-205ENST00000506963 CLEC4GQ6UXB4 293 aa12.55□□□□□ -0.4
SFXN1-205ENST00000506963 NPM2Q86SE8 214 aaKnown RBP12.55□□□□□ -0.4
SFXN1-205ENST00000506963 ZNF428Q96B54 188 aa12.55□□□□□ -0.4
SFXN1-205ENST00000506963 BCL2L12Q9HB09 334 aa12.55□□□□□ -0.4
SFXN1-205ENST00000506963 HYPKQ9NX55 129 aa12.55□□□□□ -0.4
SFXN1-205ENST00000506963 CHPF2Q9P2E5 772 aa12.55□□□□□ -0.4
SFXN1-205ENST00000506963 ERVV-1B6SEH8 477 aa12.54□□□□□ -0.4
SFXN1-205ENST00000506963 CAMTA2O94983 1202 aa12.54□□□□□ -0.4
SFXN1-205ENST00000506963 PROSER3Q2NL68 480 aa12.54□□□□□ -0.4
SFXN1-205ENST00000506963 USPL1Q5W0Q7 1092 aa12.54□□□□□ -0.4
SFXN1-205ENST00000506963 DZIP3Q86Y13 1208 aaKnown RBP12.54□□□□□ -0.4
SFXN1-205ENST00000506963 SRP68Q9UHB9 627 aaKnown RBP12.54□□□□□ -0.4
SFXN1-205ENST00000506963 TBC1D2BQ9UPU7 963 aa12.53□□□□□ -0.4
SFXN1-205ENST00000506963 MYL6BP14649 208 aa12.52□□□□□ -0.41
SFXN1-205ENST00000506963 TM4SF1P30408 202 aa12.52□□□□□ -0.41
SFXN1-205ENST00000506963 FKBP8Q14318 412 aa12.52□□□□□ -0.41
SFXN1-205ENST00000506963 ZNF330Q9Y3S2 320 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms