RNA–Protein interactions for RNA: ENST00000506842.1

HERC6-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 706 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-207ENST00000506842 FHDC1Q9C0D6 1143 aaPredicted RBP7.91□□□□□ -1.14
HERC6-207ENST00000506842 POLA1P09884 1462 aaPredicted RBP7.9□□□□□ -1.14
HERC6-207ENST00000506842 SOGA1O94964 1423 aa7.9□□□□□ -1.14
HERC6-207ENST00000506842 ICMTO60725 284 aa7.9□□□□□ -1.14
HERC6-207ENST00000506842 SLC9A9Q8IVB4 645 aa7.9□□□□□ -1.14
HERC6-207ENST00000506842 ZNF295-AS1Q8N0V1 137 aa7.9□□□□□ -1.14
HERC6-207ENST00000506842 GTF3C2Q8WUA4 911 aaPredicted RBP7.9□□□□□ -1.14
HERC6-207ENST00000506842 MKNK1Q9BUB5 465 aa7.9□□□□□ -1.14
HERC6-207ENST00000506842 TARBP1Q13395 1621 aaKnown RBP7.89□□□□□ -1.15
HERC6-207ENST00000506842 AQRO60306 1485 aaKnown RBP eCLIP7.89□□□□□ -1.15
HERC6-207ENST00000506842 PPP1R12BO60237 982 aaPredicted RBP7.89□□□□□ -1.15
HERC6-207ENST00000506842 TLR1Q15399 786 aa7.89□□□□□ -1.15
HERC6-207ENST00000506842 MEIOBQ8N635 442 aa7.89□□□□□ -1.15
HERC6-207ENST00000506842 AGBL1Q96MI9 1066 aa7.89□□□□□ -1.15
HERC6-207ENST00000506842 C2orf49Q9BVC5 232 aaPredicted RBP7.89□□□□□ -1.15
HERC6-207ENST00000506842 USP3Q9Y6I4 520 aa7.89□□□□□ -1.15
HERC6-207ENST00000506842 DNMT3AQ9Y6K1 912 aaPredicted RBP7.89□□□□□ -1.15
HERC6-207ENST00000506842 PSMA6P60900 246 aaKnown RBP7.88□□□□□ -1.15
HERC6-207ENST00000506842 CENPCQ03188 943 aa7.88□□□□□ -1.15
HERC6-207ENST00000506842 ZNF211Q13398 564 aaPredicted RBP7.88□□□□□ -1.15
HERC6-207ENST00000506842 SF3B2Q13435 895 aaKnown RBP7.88□□□□□ -1.15
HERC6-207ENST00000506842 ECM1Q16610 540 aa7.88□□□□□ -1.15
HERC6-207ENST00000506842 HPS1Q92902 700 aa7.88□□□□□ -1.15
HERC6-207ENST00000506842 RGS20O76081 388 aa7.87□□□□□ -1.15
HERC6-207ENST00000506842 ABL1P00519 1130 aa7.87□□□□□ -1.15
HERC6-207ENST00000506842 HIRAP54198 1017 aaPredicted RBP7.87□□□□□ -1.15
HERC6-207ENST00000506842 TBCELQ5QJ74 424 aa7.87□□□□□ -1.15
HERC6-207ENST00000506842 NBPF15Q8N660 670 aa7.87□□□□□ -1.15
HERC6-207ENST00000506842 HELQQ8TDG4 1101 aa7.87□□□□□ -1.15
HERC6-207ENST00000506842 RAD54L2Q9Y4B4 1467 aa7.87□□□□□ -1.15
HERC6-207ENST00000506842 TDRD9Q8NDG6 1382 aaKnown RBP7.86□□□□□ -1.15
HERC6-207ENST00000506842 H3BRB1 525 aa7.86□□□□□ -1.15
HERC6-207ENST00000506842 NPR3P17342 541 aa7.86□□□□□ -1.15
HERC6-207ENST00000506842 RELBQ01201 579 aa7.86□□□□□ -1.15
HERC6-207ENST00000506842 FKBP4Q02790 459 aaKnown RBP eCLIP7.86□□□□□ -1.15
HERC6-207ENST00000506842 TEAD4Q15561 434 aa7.86□□□□□ -1.15
HERC6-207ENST00000506842 DNAJC14Q6Y2X3 702 aaPredicted RBP7.86□□□□□ -1.15
HERC6-207ENST00000506842 PPARGC1BQ86YN6 1023 aaKnown RBP7.86□□□□□ -1.15
HERC6-207ENST00000506842 CHMP7Q8WUX9 453 aaPredicted RBP7.86□□□□□ -1.15
HERC6-207ENST00000506842 TUT1Q9H6E5 874 aaKnown RBP7.86□□□□□ -1.15
HERC6-207ENST00000506842 CUX1P39880 1505 aa7.86□□□□□ -1.15
HERC6-207ENST00000506842 MEN1O00255 615 aa7.85□□□□□ -1.15
HERC6-207ENST00000506842 EML1O00423 815 aa7.85□□□□□ -1.15
HERC6-207ENST00000506842 GPC1P35052 558 aa7.85□□□□□ -1.15
HERC6-207ENST00000506842 NAA30Q147X3 362 aaPredicted RBP7.85□□□□□ -1.15
HERC6-207ENST00000506842 NPM2Q86SE8 214 aaKnown RBP7.85□□□□□ -1.15
HERC6-207ENST00000506842 ZDHHC1Q8WTX9 485 aa7.85□□□□□ -1.15
HERC6-207ENST00000506842 NLRP3Q96P20 1036 aa7.85□□□□□ -1.15
HERC6-207ENST00000506842 ZNF395Q9H8N7 513 aaPredicted RBP7.85□□□□□ -1.15
HERC6-207ENST00000506842 ANO2Q9NQ90 1003 aa7.85□□□□□ -1.15
HERC6-207ENST00000506842 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.85□□□□□ -1.15
HERC6-207ENST00000506842 FGD5Q6ZNL6 1462 aa7.84□□□□□ -1.15
HERC6-207ENST00000506842 C16orf46Q6P387 395 aa7.84□□□□□ -1.15
HERC6-207ENST00000506842 GLYCTKQ8IVS8 523 aa7.84□□□□□ -1.15
HERC6-207ENST00000506842 VTI1AQ96AJ9 217 aa7.84□□□□□ -1.15
HERC6-207ENST00000506842 MYO19Q96H55 970 aa7.84□□□□□ -1.15
HERC6-207ENST00000506842 TSEN34Q9BSV6 310 aaKnown RBP7.84□□□□□ -1.15
HERC6-207ENST00000506842 SAP130Q9H0E3 1048 aa7.84□□□□□ -1.15
HERC6-207ENST00000506842 WDR97A6NE52 1622 aa7.84□□□□□ -1.15
HERC6-207ENST00000506842 SERTM1A2A2V5 107 aa7.83□□□□□ -1.16
HERC6-207ENST00000506842 SPINT1O43278 529 aa7.83□□□□□ -1.16
HERC6-207ENST00000506842 RNF144AP50876 292 aaPredicted RBP7.83□□□□□ -1.16
HERC6-207ENST00000506842 ARHGAP4P98171 946 aa7.83□□□□□ -1.16
HERC6-207ENST00000506842 MTMR3Q13615 1198 aa7.83□□□□□ -1.16
HERC6-207ENST00000506842 NOM1Q5C9Z4 860 aaKnown RBP7.83□□□□□ -1.16
HERC6-207ENST00000506842 ZSCAN10Q96SZ4 725 aaPredicted RBP7.83□□□□□ -1.16
HERC6-207ENST00000506842 GRIP2Q9C0E4 1043 aa7.83□□□□□ -1.16
HERC6-207ENST00000506842 QTRT2Q9H974 415 aaKnown RBP7.83□□□□□ -1.16
HERC6-207ENST00000506842 AMOTL2Q9Y2J4 779 aa7.83□□□□□ -1.16
HERC6-207ENST00000506842 EIF4G3O43432 1585 aaKnown RBP7.83□□□□□ -1.16
HERC6-207ENST00000506842 TNFRSF10BO14763 440 aa7.82□□□□□ -1.16
HERC6-207ENST00000506842 ERCC3P19447 782 aa7.82□□□□□ -1.16
HERC6-207ENST00000506842 NOS2P35228 1153 aa7.82□□□□□ -1.16
HERC6-207ENST00000506842 MARSP56192 900 aaKnown RBP7.82□□□□□ -1.16
HERC6-207ENST00000506842 COX20Q5RI15 118 aa7.82□□□□□ -1.16
HERC6-207ENST00000506842 FOXD4L5Q5VV16 416 aaPredicted RBP7.82□□□□□ -1.16
HERC6-207ENST00000506842 FOXD4L4Q8WXT5 416 aaPredicted RBP7.82□□□□□ -1.16
HERC6-207ENST00000506842 BIN2Q9UBW5 565 aaPredicted RBP7.82□□□□□ -1.16
HERC6-207ENST00000506842 CHMP3Q9Y3E7 222 aa7.82□□□□□ -1.16
HERC6-207ENST00000506842 CAPN5O15484 640 aaPredicted RBP7.81□□□□□ -1.16
HERC6-207ENST00000506842 AVPP01185 164 aa7.81□□□□□ -1.16
HERC6-207ENST00000506842 SH3PXD2AQ5TCZ1 1133 aa7.81□□□□□ -1.16
HERC6-207ENST00000506842 LINC00528Q8N1L1 170 aa7.81□□□□□ -1.16
HERC6-207ENST00000506842 RHBDD1Q8TEB9 315 aa7.81□□□□□ -1.16
HERC6-207ENST00000506842 NIFKQ9BYG3 293 aaKnown RBP7.81□□□□□ -1.16
HERC6-207ENST00000506842 ABCA10Q8WWZ4 1543 aa7.8□□□□□ -1.16
HERC6-207ENST00000506842 FAM13AO94988 1023 aa7.8□□□□□ -1.16
HERC6-207ENST00000506842 L3MBTL2Q969R5 705 aa7.8□□□□□ -1.16
HERC6-207ENST00000506842 INSM2Q96T92 566 aaPredicted RBP7.8□□□□□ -1.16
HERC6-207ENST00000506842 CABP1Q9NZU7 370 aa7.8□□□□□ -1.16
HERC6-207ENST00000506842 LRFN2Q9ULH4 789 aa7.8□□□□□ -1.16
HERC6-207ENST00000506842 PDZRN3Q9UPQ7 1066 aa7.8□□□□□ -1.16
HERC6-207ENST00000506842 GRIN2BQ13224 1484 aa7.8□□□□□ -1.16
HERC6-207ENST00000506842 WRNQ14191 1432 aaPredicted RBP eCLIP7.79□□□□□ -1.16
HERC6-207ENST00000506842 SPATA31C2B4DYI2 1134 aa7.79□□□□□ -1.16
HERC6-207ENST00000506842 TMEM214Q6NUQ4 689 aaKnown RBP7.79□□□□□ -1.16
HERC6-207ENST00000506842 STIM2Q9P246 746 aa7.79□□□□□ -1.16
HERC6-207ENST00000506842 GAPVD1Q14C86 1478 aa7.79□□□□□ -1.16
HERC6-207ENST00000506842 MAGI1Q96QZ7 1491 aaPredicted RBP7.79□□□□□ -1.16
HERC6-207ENST00000506842 MPSTP25325 297 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms