RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 APAF1O14727 1248 aa23.5■■□□□ 1.35
SMN1-204ENST00000506163 ARXQ96QS3 562 aa23.5■■□□□ 1.35
SMN1-204ENST00000506163 SOS1Q07889 1333 aaPredicted RBP23.48■■□□□ 1.35
SMN1-204ENST00000506163 ADRA2BP18089 450 aa23.48■■□□□ 1.35
SMN1-204ENST00000506163 FHDC1Q9C0D6 1143 aaPredicted RBP23.47■■□□□ 1.35
SMN1-204ENST00000506163 SRP68Q9UHB9 627 aaKnown RBP23.47■■□□□ 1.35
SMN1-204ENST00000506163 SENP3-EIF4A1A0A087X0R7 540 aa23.46■■□□□ 1.35
SMN1-204ENST00000506163 STARD3NLO95772 234 aa23.46■■□□□ 1.35
SMN1-204ENST00000506163 A1BGP04217 495 aa23.46■■□□□ 1.35
SMN1-204ENST00000506163 CANXP27824 592 aaKnown RBP23.46■■□□□ 1.35
SMN1-204ENST00000506163 POLD1P28340 1107 aa23.46■■□□□ 1.35
SMN1-204ENST00000506163 TEX13AQ9BXU3 409 aaPredicted RBP23.46■■□□□ 1.35
SMN1-204ENST00000506163 KDM3BQ7LBC6 1761 aa23.45■■□□□ 1.34
SMN1-204ENST00000506163 GYS1P13807 737 aa23.45■■□□□ 1.34
SMN1-204ENST00000506163 RFC4P35249 363 aa23.45■■□□□ 1.34
SMN1-204ENST00000506163 EIF4A1P60842 406 aaKnown RBP23.45■■□□□ 1.34
SMN1-204ENST00000506163 LMOD3Q0VAK6 560 aa23.45■■□□□ 1.34
SMN1-204ENST00000506163 C4AP0C0L4 1744 aa23.44■■□□□ 1.34
SMN1-204ENST00000506163 SNRPA1P09661 255 aaKnown RBP23.44■■□□□ 1.34
SMN1-204ENST00000506163 SYT17Q9BSW7 474 aa23.44■■□□□ 1.34
SMN1-204ENST00000506163 PIP4K2AP48426 406 aaPredicted RBP23.42■■□□□ 1.34
SMN1-204ENST00000506163 EIF5P55010 431 aaKnown RBP23.42■■□□□ 1.34
SMN1-204ENST00000506163 USP42Q9H9J4 1324 aaKnown RBP23.42■■□□□ 1.34
SMN1-204ENST00000506163 GIGYF1O75420 1035 aaPredicted RBP23.42■■□□□ 1.34
SMN1-204ENST00000506163 TSPYL4Q9UJ04 414 aa23.42■■□□□ 1.34
SMN1-204ENST00000506163 CHL1O00533 1208 aa23.41■■□□□ 1.34
SMN1-204ENST00000506163 COL15A1P39059 1388 aa23.4■■□□□ 1.34
SMN1-204ENST00000506163 NBPF26B4DH59 902 aa23.4■■□□□ 1.34
SMN1-204ENST00000506163 FKBP8Q14318 412 aa23.4■■□□□ 1.34
SMN1-204ENST00000506163 NBPF10Q6P3W6 841 aaKnown RBP23.4■■□□□ 1.34
SMN1-204ENST00000506163 NBPF15Q8N660 670 aa23.4■■□□□ 1.34
SMN1-204ENST00000506163 MMP10P09238 476 aa23.39■■□□□ 1.33
SMN1-204ENST00000506163 USPL1Q5W0Q7 1092 aa23.39■■□□□ 1.33
SMN1-204ENST00000506163 NLGN1Q8N2Q7 840 aa23.39■■□□□ 1.33
SMN1-204ENST00000506163 BCL2L12Q9HB09 334 aa23.39■■□□□ 1.33
SMN1-204ENST00000506163 BABAM1Q9NWV8 329 aa23.39■■□□□ 1.33
SMN1-204ENST00000506163 NARFQ9UHQ1 456 aa23.38■■□□□ 1.33
SMN1-204ENST00000506163 IL6STP40189 918 aaPredicted RBP23.37■■□□□ 1.33
SMN1-204ENST00000506163 KRT24Q2M2I5 525 aa23.36■■□□□ 1.33
SMN1-204ENST00000506163 KLHL34Q8N239 644 aa23.36■■□□□ 1.33
SMN1-204ENST00000506163 NLGN2Q8NFZ4 835 aa23.36■■□□□ 1.33
SMN1-204ENST00000506163 LAS1LQ9Y4W2 734 aaKnown RBP23.36■■□□□ 1.33
SMN1-204ENST00000506163 ZNF853P0CG23 659 aa23.35■■□□□ 1.33
SMN1-204ENST00000506163 FAM9BQ8IZU0 186 aa23.35■■□□□ 1.33
SMN1-204ENST00000506163 TBC1D2BQ9UPU7 963 aa23.35■■□□□ 1.33
SMN1-204ENST00000506163 ZNF330Q9Y3S2 320 aaPredicted RBP23.35■■□□□ 1.33
SMN1-204ENST00000506163 ZPR1O75312 459 aa23.34■■□□□ 1.33
SMN1-204ENST00000506163 TM4SF1P30408 202 aa23.33■■□□□ 1.33
SMN1-204ENST00000506163 DDR1Q08345 913 aa23.33■■□□□ 1.33
SMN1-204ENST00000506163 CFAP44Q96MT7 982 aa23.33■■□□□ 1.33
SMN1-204ENST00000506163 MBIPQ9NS73 344 aa23.33■■□□□ 1.32
SMN1-204ENST00000506163 A0A087WZG4 1122 aa23.31■■□□□ 1.32
SMN1-204ENST00000506163 CAMTA2O94983 1202 aa23.31■■□□□ 1.32
SMN1-204ENST00000506163 LAMB4A4D0S4 1761 aa23.3■■□□□ 1.32
SMN1-204ENST00000506163 NFIXQ14938 502 aa23.3■■□□□ 1.32
SMN1-204ENST00000506163 CCDC27Q2M243 656 aa23.3■■□□□ 1.32
SMN1-204ENST00000506163 WWC1Q8IX03 1113 aa23.3■■□□□ 1.32
SMN1-204ENST00000506163 CD2APQ9Y5K6 639 aa23.3■■□□□ 1.32
SMN1-204ENST00000506163 POLRMTO00411 1230 aaKnown RBP23.29■■□□□ 1.32
SMN1-204ENST00000506163 PDIA6Q15084 440 aa23.28■■□□□ 1.32
SMN1-204ENST00000506163 DZIP3Q86Y13 1208 aaKnown RBP23.28■■□□□ 1.32
SMN1-204ENST00000506163 IFT57Q9NWB7 429 aa23.28■■□□□ 1.32
SMN1-204ENST00000506163 SALL2Q9Y467 1007 aaPredicted RBP23.28■■□□□ 1.32
SMN1-204ENST00000506163 EIF2S2P20042 333 aaKnown RBP23.27■■□□□ 1.32
SMN1-204ENST00000506163 PARP3Q9Y6F1 533 aa23.27■■□□□ 1.32
SMN1-204ENST00000506163 TBC1D9BQ66K14 1250 aa23.26■■□□□ 1.31
SMN1-204ENST00000506163 LRP10Q7Z4F1 713 aa23.26■■□□□ 1.31
SMN1-204ENST00000506163 PROSER3Q2NL68 480 aa23.25■■□□□ 1.31
SMN1-204ENST00000506163 NCBP3Q53F19 620 aaKnown RBP23.25■■□□□ 1.31
SMN1-204ENST00000506163 NGEFQ8N5V2 710 aa23.25■■□□□ 1.31
SMN1-204ENST00000506163 NECTIN2Q92692 538 aa23.25■■□□□ 1.31
SMN1-204ENST00000506163 UTRNP46939 3433 aa23.25■■□□□ 1.31
SMN1-204ENST00000506163 GOLGB1Q14789 3259 aaKnown RBP23.25■■□□□ 1.31
SMN1-204ENST00000506163 ANXA1P04083 346 aa23.25■■□□□ 1.31
SMN1-204ENST00000506163 MYL6BP14649 208 aa23.25■■□□□ 1.31
SMN1-204ENST00000506163 GNAI1P63096 354 aa23.25■■□□□ 1.31
SMN1-204ENST00000506163 DIEXFQ68CQ4 756 aaKnown RBP23.25■■□□□ 1.31
SMN1-204ENST00000506163 BICDL1Q6ZP65 573 aa23.25■■□□□ 1.31
SMN1-204ENST00000506163 SCN7AQ01118 1682 aa23.24■■□□□ 1.31
SMN1-204ENST00000506163 CCER2I3L3R5 266 aa23.24■■□□□ 1.31
SMN1-204ENST00000506163 CALD1Q05682 793 aaKnown RBP23.24■■□□□ 1.31
SMN1-204ENST00000506163 C10orf71Q711Q0 1435 aa23.23■■□□□ 1.31
SMN1-204ENST00000506163 HLFQ16534 295 aa23.23■■□□□ 1.31
SMN1-204ENST00000506163 DUSP27Q5VZP5 1158 aa23.23■■□□□ 1.31
SMN1-204ENST00000506163 TTLL7Q6ZT98 887 aa23.23■■□□□ 1.31
SMN1-204ENST00000506163 POTEDQ86YR6 584 aa23.23■■□□□ 1.31
SMN1-204ENST00000506163 KIF13BQ9NQT8 1826 aa23.22■■□□□ 1.31
SMN1-204ENST00000506163 NPM2Q86SE8 214 aaKnown RBP23.22■■□□□ 1.31
SMN1-204ENST00000506163 MIER1Q8N108 512 aa23.22■■□□□ 1.31
SMN1-204ENST00000506163 ERBB4Q15303 1308 aa23.21■■□□□ 1.31
SMN1-204ENST00000506163 SERPINB2P05120 415 aa23.21■■□□□ 1.31
SMN1-204ENST00000506163 C8orf58Q8NAV2 365 aa23.21■■□□□ 1.31
SMN1-204ENST00000506163 TSR2Q969E8 191 aaKnown RBP23.21■■□□□ 1.31
SMN1-204ENST00000506163 BCORQ6W2J9 1755 aa23.21■■□□□ 1.31
SMN1-204ENST00000506163 AFDNP55196 1824 aaKnown RBP23.2■■□□□ 1.31
SMN1-204ENST00000506163 KIAA1551Q9HCM1 1747 aa23.19■■□□□ 1.3
SMN1-204ENST00000506163 ELL2O00472 640 aaPredicted RBP23.19■■□□□ 1.3
SMN1-204ENST00000506163 YBX3P16989 372 aaKnown RBP eCLIP23.19■■□□□ 1.3
SMN1-204ENST00000506163 CLEC4GQ6UXB4 293 aa23.19■■□□□ 1.3
SMN1-204ENST00000506163 SPINK5Q9NQ38 1064 aaPredicted RBP23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms