RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 ARAFP10398 606 aa6.63□□□□□ -1.35
TRAPPC13-208ENST00000505553 ABL2P42684 1182 aa6.63□□□□□ -1.35
TRAPPC13-208ENST00000505553 EFHC2Q5JST6 749 aa6.63□□□□□ -1.35
TRAPPC13-208ENST00000505553 FGFR3P22607 806 aa6.62□□□□□ -1.35
TRAPPC13-208ENST00000505553 GLMNQ92990 594 aa6.62□□□□□ -1.35
TRAPPC13-208ENST00000505553 SPDYE3A6NKU9 549 aa6.61□□□□□ -1.35
TRAPPC13-208ENST00000505553 C2CD2LO14523 706 aa6.61□□□□□ -1.35
TRAPPC13-208ENST00000505553 DYRK3O43781 588 aa6.61□□□□□ -1.35
TRAPPC13-208ENST00000505553 ERVK-9P63128 1117 aa6.61□□□□□ -1.35
TRAPPC13-208ENST00000505553 TMCO4Q5TGY1 634 aa6.61□□□□□ -1.35
TRAPPC13-208ENST00000505553 CHSY3Q70JA7 882 aa6.61□□□□□ -1.35
TRAPPC13-208ENST00000505553 ESF1Q9H501 851 aaKnown RBP6.61□□□□□ -1.35
TRAPPC13-208ENST00000505553 GTF2E1P29083 439 aaPredicted RBP6.6□□□□□ -1.35
TRAPPC13-208ENST00000505553 UBAP2LQ14157 1087 aaKnown RBP6.6□□□□□ -1.35
TRAPPC13-208ENST00000505553 NEURL1BA8MQ27 555 aa6.59□□□□□ -1.35
TRAPPC13-208ENST00000505553 APBA3O96018 575 aa6.59□□□□□ -1.35
TRAPPC13-208ENST00000505553 CTBSQ01459 385 aa6.59□□□□□ -1.35
TRAPPC13-208ENST00000505553 LRP8Q14114 963 aa6.59□□□□□ -1.35
TRAPPC13-208ENST00000505553 WASHC4Q2M389 1173 aa6.59□□□□□ -1.35
TRAPPC13-208ENST00000505553 RNF20Q5VTR2 975 aa6.59□□□□□ -1.35
TRAPPC13-208ENST00000505553 ABHD17AQ96GS6 310 aa6.59□□□□□ -1.35
TRAPPC13-208ENST00000505553 TRIM34Q9BYJ4 488 aa6.59□□□□□ -1.35
TRAPPC13-208ENST00000505553 TPSG1Q9NRR2 321 aa6.59□□□□□ -1.35
TRAPPC13-208ENST00000505553 TBC1D2BQ9UPU7 963 aa6.59□□□□□ -1.35
TRAPPC13-208ENST00000505553 ZBBXA8MT70 800 aa6.59□□□□□ -1.36
TRAPPC13-208ENST00000505553 IRF5Q13568 498 aa6.59□□□□□ -1.36
TRAPPC13-208ENST00000505553 PLVAPQ9BX97 442 aa6.59□□□□□ -1.36
TRAPPC13-208ENST00000505553 GZF1Q9H116 711 aaPredicted RBP6.59□□□□□ -1.36
TRAPPC13-208ENST00000505553 ARHGEF10LQ9HCE6 1279 aa6.59□□□□□ -1.36
TRAPPC13-208ENST00000505553 PCDHB9Q9Y5E1 797 aa6.59□□□□□ -1.36
TRAPPC13-208ENST00000505553 NDUFB9Q9Y6M9 179 aa6.59□□□□□ -1.36
TRAPPC13-208ENST00000505553 POM121CA8CG34 1229 aa6.58□□□□□ -1.36
TRAPPC13-208ENST00000505553 GIGYF1O75420 1035 aaPredicted RBP6.58□□□□□ -1.36
TRAPPC13-208ENST00000505553 ADH6P28332 368 aa6.58□□□□□ -1.36
TRAPPC13-208ENST00000505553 PHKA2P46019 1235 aa6.58□□□□□ -1.36
TRAPPC13-208ENST00000505553 PRRT3Q5FWE3 981 aa6.58□□□□□ -1.36
TRAPPC13-208ENST00000505553 GNASQ5JWF2 1037 aa6.58□□□□□ -1.36
TRAPPC13-208ENST00000505553 PRSS36Q5K4E3 855 aa6.58□□□□□ -1.36
TRAPPC13-208ENST00000505553 PBXIP1Q96AQ6 731 aa6.58□□□□□ -1.36
TRAPPC13-208ENST00000505553 RUBCNLQ9H714 662 aa6.58□□□□□ -1.36
TRAPPC13-208ENST00000505553 BNIP3LO60238 219 aa6.57□□□□□ -1.36
TRAPPC13-208ENST00000505553 FIGNL1Q6PIW4 674 aa6.57□□□□□ -1.36
TRAPPC13-208ENST00000505553 ZSCAN10Q96SZ4 725 aaPredicted RBP6.57□□□□□ -1.36
TRAPPC13-208ENST00000505553 NDFIP2Q9NV92 336 aa6.57□□□□□ -1.36
TRAPPC13-208ENST00000505553 HDGFL1Q5TGJ6 251 aa6.56□□□□□ -1.36
TRAPPC13-208ENST00000505553 TRIM11Q96F44 468 aa6.56□□□□□ -1.36
TRAPPC13-208ENST00000505553 ESYT1Q9BSJ8 1104 aa6.56□□□□□ -1.36
TRAPPC13-208ENST00000505553 AVENQ9NQS1 362 aaPredicted RBP6.56□□□□□ -1.36
TRAPPC13-208ENST00000505553 USTQ9Y2C2 406 aa6.56□□□□□ -1.36
TRAPPC13-208ENST00000505553 COBLO75128 1261 aa6.55□□□□□ -1.36
TRAPPC13-208ENST00000505553 GNRH1P01148 92 aa6.55□□□□□ -1.36
TRAPPC13-208ENST00000505553 FBXO45P0C2W1 286 aa6.55□□□□□ -1.36
TRAPPC13-208ENST00000505553 MSX1P28360 303 aa6.55□□□□□ -1.36
TRAPPC13-208ENST00000505553 MFAP1P55081 439 aaKnown RBP6.55□□□□□ -1.36
TRAPPC13-208ENST00000505553 MCCD1P59942 119 aaPredicted RBP6.55□□□□□ -1.36
TRAPPC13-208ENST00000505553 CENPCQ03188 943 aa6.55□□□□□ -1.36
TRAPPC13-208ENST00000505553 RGS22Q8NE09 1264 aa6.55□□□□□ -1.36
TRAPPC13-208ENST00000505553 ZNF592Q92610 1267 aa6.55□□□□□ -1.36
TRAPPC13-208ENST00000505553 CNKSR1Q969H4 720 aa6.55□□□□□ -1.36
TRAPPC13-208ENST00000505553 GJD4Q96KN9 370 aaPredicted RBP6.55□□□□□ -1.36
TRAPPC13-208ENST00000505553 NACC1Q96RE7 527 aa6.55□□□□□ -1.36
TRAPPC13-208ENST00000505553 BRD1O95696 1058 aa6.54□□□□□ -1.36
TRAPPC13-208ENST00000505553 KCNA1Q09470 495 aa6.54□□□□□ -1.36
TRAPPC13-208ENST00000505553 TMEM214Q6NUQ4 689 aaKnown RBP6.54□□□□□ -1.36
TRAPPC13-208ENST00000505553 NR1H3Q13133 447 aa6.53□□□□□ -1.36
TRAPPC13-208ENST00000505553 CRISPLD1Q9H336 500 aa6.53□□□□□ -1.36
TRAPPC13-208ENST00000505553 HYAL3O43820 417 aaPredicted RBP6.52□□□□□ -1.37
TRAPPC13-208ENST00000505553 TXKP42681 527 aa6.52□□□□□ -1.37
TRAPPC13-208ENST00000505553 OSBPL3Q9H4L5 887 aa6.52□□□□□ -1.37
TRAPPC13-208ENST00000505553 PCDHGC4Q9Y5F7 938 aa6.52□□□□□ -1.37
TRAPPC13-208ENST00000505553 H2AFB1P0C5Y9 115 aa6.51□□□□□ -1.37
TRAPPC13-208ENST00000505553 H2AFB2P0C5Z0 115 aa6.51□□□□□ -1.37
TRAPPC13-208ENST00000505553 RFX1P22670 979 aa6.51□□□□□ -1.37
TRAPPC13-208ENST00000505553 C4orf17Q53FE4 359 aa6.51□□□□□ -1.37
TRAPPC13-208ENST00000505553 FAM182BQ5T319 152 aa6.51□□□□□ -1.37
TRAPPC13-208ENST00000505553 RAB6BQ9NRW1 208 aa6.51□□□□□ -1.37
TRAPPC13-208ENST00000505553 MTMR7Q9Y216 660 aa6.51□□□□□ -1.37
TRAPPC13-208ENST00000505553 PAX4O43316 350 aa6.5□□□□□ -1.37
TRAPPC13-208ENST00000505553 YBX3P16989 372 aaKnown RBP eCLIP6.5□□□□□ -1.37
TRAPPC13-208ENST00000505553 SOX11P35716 441 aa6.5□□□□□ -1.37
TRAPPC13-208ENST00000505553 SCTRP47872 440 aa6.5□□□□□ -1.37
TRAPPC13-208ENST00000505553 PPP1R12CQ9BZL4 782 aa6.5□□□□□ -1.37
TRAPPC13-208ENST00000505553 PCDHB11Q9Y5F2 797 aa6.5□□□□□ -1.37
TRAPPC13-208ENST00000505553 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.5□□□□□ -1.37
TRAPPC13-208ENST00000505553 IL2RAP01589 272 aa6.5□□□□□ -1.37
TRAPPC13-208ENST00000505553 CFAP70Q5T0N1 1121 aa6.5□□□□□ -1.37
TRAPPC13-208ENST00000505553 MCTP1Q6DN14 999 aa6.5□□□□□ -1.37
TRAPPC13-208ENST00000505553 FCHSD1Q86WN1 690 aa6.5□□□□□ -1.37
TRAPPC13-208ENST00000505553 ADAMTS19Q8TE59 1207 aa6.5□□□□□ -1.37
TRAPPC13-208ENST00000505553 ZCCHC2Q9C0B9 1178 aaKnown RBP6.5□□□□□ -1.37
TRAPPC13-208ENST00000505553 ALAS2P22557 587 aa6.49□□□□□ -1.37
TRAPPC13-208ENST00000505553 NLRP8Q86W28 1048 aa6.49□□□□□ -1.37
TRAPPC13-208ENST00000505553 ATXN7O15265 892 aaPredicted RBP6.48□□□□□ -1.37
TRAPPC13-208ENST00000505553 SRPK2P78362 688 aaKnown RBP6.48□□□□□ -1.37
TRAPPC13-208ENST00000505553 VAC14Q08AM6 782 aa6.48□□□□□ -1.37
TRAPPC13-208ENST00000505553 TRIM28Q13263 835 aaKnown RBP6.48□□□□□ -1.37
TRAPPC13-208ENST00000505553 ESCO1Q5FWF5 840 aa6.48□□□□□ -1.37
TRAPPC13-208ENST00000505553 TBC1D9Q6ZT07 1266 aa6.48□□□□□ -1.37
TRAPPC13-208ENST00000505553 RHBDD1Q8TEB9 315 aa6.48□□□□□ -1.37
TRAPPC13-208ENST00000505553 XAGE2Q96GT9 111 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms