RNA–Protein interactions for RNA: ENST00000505108.1

TRAPPC13-207, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 844 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-207ENST00000505108 NBPF10Q6P3W6 841 aaKnown RBP10.71□□□□□ -0.69
TRAPPC13-207ENST00000505108 TAS1R3Q7RTX0 852 aa10.71□□□□□ -0.69
TRAPPC13-207ENST00000505108 NBPF15Q8N660 670 aa10.71□□□□□ -0.69
TRAPPC13-207ENST00000505108 C2orf49Q9BVC5 232 aaPredicted RBP10.71□□□□□ -0.69
TRAPPC13-207ENST00000505108 NIFKQ9BYG3 293 aaKnown RBP10.71□□□□□ -0.69
TRAPPC13-207ENST00000505108 POTECB2RU33 542 aa10.7□□□□□ -0.7
TRAPPC13-207ENST00000505108 EML1O00423 815 aa10.7□□□□□ -0.7
TRAPPC13-207ENST00000505108 MAN1A2O60476 641 aa10.7□□□□□ -0.7
TRAPPC13-207ENST00000505108 BRD1O95696 1058 aa10.7□□□□□ -0.7
TRAPPC13-207ENST00000505108 GTF2E1P29083 439 aaPredicted RBP10.7□□□□□ -0.7
TRAPPC13-207ENST00000505108 POTEAQ6S8J7 498 aa10.7□□□□□ -0.7
TRAPPC13-207ENST00000505108 L3MBTL2Q969R5 705 aa10.7□□□□□ -0.7
TRAPPC13-207ENST00000505108 TRIM47Q96LD4 638 aa10.7□□□□□ -0.7
TRAPPC13-207ENST00000505108 MKNK1Q9BUB5 465 aa10.7□□□□□ -0.7
TRAPPC13-207ENST00000505108 SNRPBP14678 240 aaKnown RBP10.69□□□□□ -0.7
TRAPPC13-207ENST00000505108 NOS2P35228 1153 aa10.69□□□□□ -0.7
TRAPPC13-207ENST00000505108 PLA2G4AP47712 749 aa10.69□□□□□ -0.7
TRAPPC13-207ENST00000505108 C1orf216Q8TAB5 229 aa10.69□□□□□ -0.7
TRAPPC13-207ENST00000505108 SENP2Q9HC62 589 aa10.69□□□□□ -0.7
TRAPPC13-207ENST00000505108 SERTM1A2A2V5 107 aa10.68□□□□□ -0.7
TRAPPC13-207ENST00000505108 FOXO3O43524 673 aa10.68□□□□□ -0.7
TRAPPC13-207ENST00000505108 STAG2Q8N3U4 1231 aa10.68□□□□□ -0.7
TRAPPC13-207ENST00000505108 ZNF232Q9UNY5 417 aa10.68□□□□□ -0.7
TRAPPC13-207ENST00000505108 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.67□□□□□ -0.7
TRAPPC13-207ENST00000505108 AEBP1Q8IUX7 1158 aa10.67□□□□□ -0.7
TRAPPC13-207ENST00000505108 SEPT3Q9UH03 358 aa10.67□□□□□ -0.7
TRAPPC13-207ENST00000505108 HCN4Q9Y3Q4 1203 aa10.67□□□□□ -0.7
TRAPPC13-207ENST00000505108 SENP3-EIF4A1A0A087X0R7 540 aa10.66□□□□□ -0.7
TRAPPC13-207ENST00000505108 TXLNAP40222 546 aa10.66□□□□□ -0.7
TRAPPC13-207ENST00000505108 B4GALNT3Q6L9W6 998 aa10.66□□□□□ -0.7
TRAPPC13-207ENST00000505108 KIFC2Q96AC6 838 aa10.66□□□□□ -0.7
TRAPPC13-207ENST00000505108 HIRAP54198 1017 aaPredicted RBP10.65□□□□□ -0.7
TRAPPC13-207ENST00000505108 WDR44Q5JSH3 913 aa10.65□□□□□ -0.7
TRAPPC13-207ENST00000505108 C11orf95C9JLR9 678 aaPredicted RBP10.64□□□□□ -0.71
TRAPPC13-207ENST00000505108 NAA30Q147X3 362 aaPredicted RBP10.64□□□□□ -0.71
TRAPPC13-207ENST00000505108 AIDAQ96BJ3 306 aa10.64□□□□□ -0.71
TRAPPC13-207ENST00000505108 TIMMDC1Q9NPL8 285 aa10.64□□□□□ -0.71
TRAPPC13-207ENST00000505108 TXNDC2Q86VQ3 553 aa10.63□□□□□ -0.71
TRAPPC13-207ENST00000505108 KLRG1Q96E93 195 aa10.63□□□□□ -0.71
TRAPPC13-207ENST00000505108 NGLY1Q96IV0 654 aa10.63□□□□□ -0.71
TRAPPC13-207ENST00000505108 SAP130Q9H0E3 1048 aa10.63□□□□□ -0.71
TRAPPC13-207ENST00000505108 CHMP3Q9Y3E7 222 aa10.63□□□□□ -0.71
TRAPPC13-207ENST00000505108 ATP4AP20648 1035 aa10.62□□□□□ -0.71
TRAPPC13-207ENST00000505108 PTSQ03393 145 aa10.62□□□□□ -0.71
TRAPPC13-207ENST00000505108 ALDH16A1Q8IZ83 802 aa10.62□□□□□ -0.71
TRAPPC13-207ENST00000505108 KCTD17Q8N5Z5 321 aa10.62□□□□□ -0.71
TRAPPC13-207ENST00000505108 C7orf43Q8WVR3 580 aa10.62□□□□□ -0.71
TRAPPC13-207ENST00000505108 COL26A1Q96A83 441 aa10.62□□□□□ -0.71
TRAPPC13-207ENST00000505108 VTI1AQ96AJ9 217 aa10.62□□□□□ -0.71
TRAPPC13-207ENST00000505108 PHACTR1Q9C0D0 580 aa10.62□□□□□ -0.71
TRAPPC13-207ENST00000505108 QTRT2Q9H974 415 aaKnown RBP10.62□□□□□ -0.71
TRAPPC13-207ENST00000505108 ARID4AP29374 1257 aaPredicted RBP10.61□□□□□ -0.71
TRAPPC13-207ENST00000505108 SERPINB4P48594 390 aa10.61□□□□□ -0.71
TRAPPC13-207ENST00000505108 KCNA1Q09470 495 aa10.61□□□□□ -0.71
TRAPPC13-207ENST00000505108 PTCD1O75127 700 aaKnown RBP10.6□□□□□ -0.71
TRAPPC13-207ENST00000505108 MSX1P28360 303 aa10.6□□□□□ -0.71
TRAPPC13-207ENST00000505108 GPAMQ9HCL2 828 aa10.6□□□□□ -0.71
TRAPPC13-207ENST00000505108 DYRK1BQ9Y463 629 aa10.6□□□□□ -0.71
TRAPPC13-207ENST00000505108 A0A1B0GTH6 734 aa10.59□□□□□ -0.71
TRAPPC13-207ENST00000505108 SLC35F4A4IF30 521 aa10.59□□□□□ -0.71
TRAPPC13-207ENST00000505108 NBPF1Q3BBV0 1214 aa10.59□□□□□ -0.71
TRAPPC13-207ENST00000505108 COX20Q5RI15 118 aa10.59□□□□□ -0.71
TRAPPC13-207ENST00000505108 GTF3C2Q8WUA4 911 aaPredicted RBP10.59□□□□□ -0.71
TRAPPC13-207ENST00000505108 ZDHHC3Q9NYG2 299 aa10.59□□□□□ -0.71
TRAPPC13-207ENST00000505108 LRFN2Q9ULH4 789 aa10.59□□□□□ -0.71
TRAPPC13-207ENST00000505108 GNEQ9Y223 722 aaKnown RBP10.59□□□□□ -0.71
TRAPPC13-207ENST00000505108 IVNS1ABPQ9Y6Y0 642 aa10.59□□□□□ -0.71
TRAPPC13-207ENST00000505108 GAS2L1Q99501 681 aaPredicted RBP10.58□□□□□ -0.72
TRAPPC13-207ENST00000505108 DNMT3AQ9Y6K1 912 aaPredicted RBP10.58□□□□□ -0.72
TRAPPC13-207ENST00000505108 TRIM26Q12899 539 aaPredicted RBP10.57□□□□□ -0.72
TRAPPC13-207ENST00000505108 MTMR3Q13615 1198 aa10.57□□□□□ -0.72
TRAPPC13-207ENST00000505108 C1orf53Q5VUE5 145 aa10.57□□□□□ -0.72
TRAPPC13-207ENST00000505108 C16orf46Q6P387 395 aa10.57□□□□□ -0.72
TRAPPC13-207ENST00000505108 F11P03951 625 aa10.56□□□□□ -0.72
TRAPPC13-207ENST00000505108 ZNF211Q13398 564 aaPredicted RBP10.56□□□□□ -0.72
TRAPPC13-207ENST00000505108 RTN1Q16799 776 aa10.56□□□□□ -0.72
TRAPPC13-207ENST00000505108 CCDC155Q8N6L0 562 aa10.56□□□□□ -0.72
TRAPPC13-207ENST00000505108 MYO19Q96H55 970 aa10.56□□□□□ -0.72
TRAPPC13-207ENST00000505108 RUBCNLQ9H714 662 aa10.56□□□□□ -0.72
TRAPPC13-207ENST00000505108 ANO2Q9NQ90 1003 aa10.56□□□□□ -0.72
TRAPPC13-207ENST00000505108 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.56□□□□□ -0.72
TRAPPC13-207ENST00000505108 CUEDC1Q9NWM3 386 aaPredicted RBP10.56□□□□□ -0.72
TRAPPC13-207ENST00000505108 KLK14Q9P0G3 267 aa10.56□□□□□ -0.72
TRAPPC13-207ENST00000505108 TNFRSF10BO14763 440 aa10.55□□□□□ -0.72
TRAPPC13-207ENST00000505108 ABL1P00519 1130 aa10.55□□□□□ -0.72
TRAPPC13-207ENST00000505108 TATP17735 454 aaPredicted RBP10.55□□□□□ -0.72
TRAPPC13-207ENST00000505108 CCER1Q8TC90 406 aaPredicted RBP10.55□□□□□ -0.72
TRAPPC13-207ENST00000505108 ZIC5Q96T25 663 aa10.55□□□□□ -0.72
TRAPPC13-207ENST00000505108 THBS1P07996 1170 aa10.54□□□□□ -0.72
TRAPPC13-207ENST00000505108 DGKZQ13574 1117 aa10.54□□□□□ -0.72
TRAPPC13-207ENST00000505108 ARSJQ5FYB0 599 aaPredicted RBP10.54□□□□□ -0.72
TRAPPC13-207ENST00000505108 FAM26DQ5JW98 314 aa10.54□□□□□ -0.72
TRAPPC13-207ENST00000505108 RHPN1Q8TCX5 695 aa10.54□□□□□ -0.72
TRAPPC13-207ENST00000505108 BICDL1Q6ZP65 573 aa10.53□□□□□ -0.72
TRAPPC13-207ENST00000505108 ZNF280CQ8ND82 737 aa10.53□□□□□ -0.72
TRAPPC13-207ENST00000505108 MTMR7Q9Y216 660 aa10.53□□□□□ -0.72
TRAPPC13-207ENST00000505108 BCS1LQ9Y276 419 aa10.53□□□□□ -0.72
TRAPPC13-207ENST00000505108 A0A1W2PNR3 127 aa10.52□□□□□ -0.73
TRAPPC13-207ENST00000505108 RIPOR1Q6ZS17 1223 aa10.52□□□□□ -0.73
TRAPPC13-207ENST00000505108 HELQQ8TDG4 1101 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms