RNA–Protein interactions for RNA: ENST00000504751.5

TRAPPC13-206, Transcript of trafficking protein particle complex 13, humanhuman

TSL 4

Gene TRAPPC13, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-206ENST00000504751 PTCD1O75127 700 aaKnown RBP10.02□□□□□ -0.81
TRAPPC13-206ENST00000504751 SCARF1Q14162 830 aa10.02□□□□□ -0.81
TRAPPC13-206ENST00000504751 SH3PXD2AQ5TCZ1 1133 aa10.02□□□□□ -0.81
TRAPPC13-206ENST00000504751 TMEM214Q6NUQ4 689 aaKnown RBP10.02□□□□□ -0.81
TRAPPC13-206ENST00000504751 AAASQ9NRG9 546 aa10.02□□□□□ -0.81
TRAPPC13-206ENST00000504751 SOS2Q07890 1332 aaPredicted RBP10.02□□□□□ -0.81
TRAPPC13-206ENST00000504751 SPATA31C2B4DYI2 1134 aa10.01□□□□□ -0.81
TRAPPC13-206ENST00000504751 ZFP42Q96MM3 310 aa10.01□□□□□ -0.81
TRAPPC13-206ENST00000504751 NIFKQ9BYG3 293 aaKnown RBP10.01□□□□□ -0.81
TRAPPC13-206ENST00000504751 IRX2Q9BZI1 471 aaPredicted RBP10.01□□□□□ -0.81
TRAPPC13-206ENST00000504751 SERTM1A2A2V5 107 aa10□□□□□ -0.81
TRAPPC13-206ENST00000504751 TTLL8A6PVC2 850 aa10□□□□□ -0.81
TRAPPC13-206ENST00000504751 C4orf17Q53FE4 359 aa10□□□□□ -0.81
TRAPPC13-206ENST00000504751 GNASQ5JWF2 1037 aa10□□□□□ -0.81
TRAPPC13-206ENST00000504751 GZF1Q9H116 711 aaPredicted RBP10□□□□□ -0.81
TRAPPC13-206ENST00000504751 ATP13A2Q9NQ11 1180 aa10□□□□□ -0.81
TRAPPC13-206ENST00000504751 PODXL2Q9NZ53 605 aa10□□□□□ -0.81
TRAPPC13-206ENST00000504751 CABP1Q9NZU7 370 aa10□□□□□ -0.81
TRAPPC13-206ENST00000504751 GTF2E1P29083 439 aaPredicted RBP9.99□□□□□ -0.81
TRAPPC13-206ENST00000504751 NOS2P35228 1153 aa9.99□□□□□ -0.81
TRAPPC13-206ENST00000504751 L3MBTL2Q969R5 705 aa9.99□□□□□ -0.81
TRAPPC13-206ENST00000504751 MTMR7Q9Y216 660 aa9.99□□□□□ -0.81
TRAPPC13-206ENST00000504751 CHMP3Q9Y3E7 222 aa9.99□□□□□ -0.81
TRAPPC13-206ENST00000504751 PARP3Q9Y6F1 533 aa9.99□□□□□ -0.81
TRAPPC13-206ENST00000504751 PLA2G4AP47712 749 aa9.98□□□□□ -0.81
TRAPPC13-206ENST00000504751 NBPF10Q6P3W6 841 aaKnown RBP9.98□□□□□ -0.81
TRAPPC13-206ENST00000504751 GTF3C2Q8WUA4 911 aaPredicted RBP9.98□□□□□ -0.81
TRAPPC13-206ENST00000504751 VTI1AQ96AJ9 217 aa9.98□□□□□ -0.81
TRAPPC13-206ENST00000504751 QTRT2Q9H974 415 aaKnown RBP9.98□□□□□ -0.81
TRAPPC13-206ENST00000504751 EGFL7Q9UHF1 273 aa9.98□□□□□ -0.81
TRAPPC13-206ENST00000504751 DACH1Q9UI36 760 aa9.98□□□□□ -0.81
TRAPPC13-206ENST00000504751 ZNF232Q9UNY5 417 aa9.98□□□□□ -0.81
TRAPPC13-206ENST00000504751 ZNF211Q13398 564 aaPredicted RBP9.97□□□□□ -0.81
TRAPPC13-206ENST00000504751 LYSMD3Q7Z3D4 306 aa9.97□□□□□ -0.81
TRAPPC13-206ENST00000504751 DNMT3LQ9UJW3 386 aa9.97□□□□□ -0.81
TRAPPC13-206ENST00000504751 DNMT3AQ9Y6K1 912 aaPredicted RBP9.97□□□□□ -0.81
TRAPPC13-206ENST00000504751 SOWAHDA6NJG2 315 aa9.96□□□□□ -0.82
TRAPPC13-206ENST00000504751 POU4F2Q12837 409 aa9.96□□□□□ -0.82
TRAPPC13-206ENST00000504751 NAA30Q147X3 362 aaPredicted RBP9.96□□□□□ -0.82
TRAPPC13-206ENST00000504751 WDR44Q5JSH3 913 aa9.96□□□□□ -0.82
TRAPPC13-206ENST00000504751 SND1Q7KZF4 910 aaKnown RBP eCLIP9.96□□□□□ -0.82
TRAPPC13-206ENST00000504751 PRICKLE2Q7Z3G6 844 aa9.96□□□□□ -0.82
TRAPPC13-206ENST00000504751 SAP130Q9H0E3 1048 aa9.96□□□□□ -0.82
TRAPPC13-206ENST00000504751 TXLNAP40222 546 aa9.95□□□□□ -0.82
TRAPPC13-206ENST00000504751 C16orf46Q6P387 395 aa9.95□□□□□ -0.82
TRAPPC13-206ENST00000504751 HELQQ8TDG4 1101 aa9.95□□□□□ -0.82
TRAPPC13-206ENST00000504751 FIGNL2A6NMB9 653 aa9.94□□□□□ -0.82
TRAPPC13-206ENST00000504751 ABL1P00519 1130 aa9.94□□□□□ -0.82
TRAPPC13-206ENST00000504751 PHKA2P46019 1235 aa9.94□□□□□ -0.82
TRAPPC13-206ENST00000504751 MTMR3Q13615 1198 aa9.94□□□□□ -0.82
TRAPPC13-206ENST00000504751 COX20Q5RI15 118 aa9.94□□□□□ -0.82
TRAPPC13-206ENST00000504751 ALDH16A1Q8IZ83 802 aa9.94□□□□□ -0.82
TRAPPC13-206ENST00000504751 MYO19Q96H55 970 aa9.94□□□□□ -0.82
TRAPPC13-206ENST00000504751 H3BRB1 525 aa9.93□□□□□ -0.82
TRAPPC13-206ENST00000504751 TNFRSF10BO14763 440 aa9.93□□□□□ -0.82
TRAPPC13-206ENST00000504751 ICMTO60725 284 aa9.93□□□□□ -0.82
TRAPPC13-206ENST00000504751 NGLY1Q96IV0 654 aa9.93□□□□□ -0.82
TRAPPC13-206ENST00000504751 PHACTR1Q9C0D0 580 aa9.93□□□□□ -0.82
TRAPPC13-206ENST00000504751 TUT1Q9H6E5 874 aaKnown RBP9.93□□□□□ -0.82
TRAPPC13-206ENST00000504751 ANO2Q9NQ90 1003 aa9.93□□□□□ -0.82
TRAPPC13-206ENST00000504751 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.93□□□□□ -0.822e-6■■■■■ 149.1
TRAPPC13-206ENST00000504751 HCN4Q9Y3Q4 1203 aa9.93□□□□□ -0.82
TRAPPC13-206ENST00000504751 LCE2BO14633 110 aa9.92□□□□□ -0.82
TRAPPC13-206ENST00000504751 RHOQP17081 205 aa9.92□□□□□ -0.82
TRAPPC13-206ENST00000504751 ATP4AP20648 1035 aa9.92□□□□□ -0.82
TRAPPC13-206ENST00000504751 RTN1Q16799 776 aa9.92□□□□□ -0.82
TRAPPC13-206ENST00000504751 NBPF1Q3BBV0 1214 aa9.92□□□□□ -0.82
TRAPPC13-206ENST00000504751 C1orf53Q5VUE5 145 aa9.92□□□□□ -0.82
TRAPPC13-206ENST00000504751 ZDHHC3Q9NYG2 299 aa9.92□□□□□ -0.82
TRAPPC13-206ENST00000504751 LRFN2Q9ULH4 789 aa9.92□□□□□ -0.82
TRAPPC13-206ENST00000504751 SF3B2Q13435 895 aaKnown RBP9.91□□□□□ -0.82
TRAPPC13-206ENST00000504751 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.91□□□□□ -0.82
TRAPPC13-206ENST00000504751 C7orf43Q8WVR3 580 aa9.91□□□□□ -0.82
TRAPPC13-206ENST00000504751 ECM1Q16610 540 aa9.9□□□□□ -0.82
TRAPPC13-206ENST00000504751 TMCO4Q5TGY1 634 aa9.9□□□□□ -0.82
TRAPPC13-206ENST00000504751 A0A1B0GTH6 734 aa9.89□□□□□ -0.83
TRAPPC13-206ENST00000504751 MAN1A2O60476 641 aa9.89□□□□□ -0.83
TRAPPC13-206ENST00000504751 NPR3P17342 541 aa9.89□□□□□ -0.83
TRAPPC13-206ENST00000504751 FKBP4Q02790 459 aaKnown RBP eCLIP9.89□□□□□ -0.83
TRAPPC13-206ENST00000504751 TIMMDC1Q9NPL8 285 aa9.89□□□□□ -0.83
TRAPPC13-206ENST00000504751 SENP3-EIF4A1A0A087X0R7 540 aa9.88□□□□□ -0.83
TRAPPC13-206ENST00000504751 SOBPA7XYQ1 873 aa9.88□□□□□ -0.83
TRAPPC13-206ENST00000504751 FAM26DQ5JW98 314 aa9.88□□□□□ -0.83
TRAPPC13-206ENST00000504751 GLYCTKQ8IVS8 523 aa9.88□□□□□ -0.83
TRAPPC13-206ENST00000504751 AIDAQ96BJ3 306 aa9.88□□□□□ -0.83
TRAPPC13-206ENST00000504751 KLRG1Q96E93 195 aa9.88□□□□□ -0.83
TRAPPC13-206ENST00000504751 TRIM47Q96LD4 638 aa9.88□□□□□ -0.83
TRAPPC13-206ENST00000504751 TATP17735 454 aaPredicted RBP9.87□□□□□ -0.83
TRAPPC13-206ENST00000504751 MSX1P28360 303 aa9.87□□□□□ -0.83
TRAPPC13-206ENST00000504751 ARHGAP4P98171 946 aa9.87□□□□□ -0.83
TRAPPC13-206ENST00000504751 DGKZQ13574 1117 aa9.87□□□□□ -0.83
TRAPPC13-206ENST00000504751 RHPN1Q8TCX5 695 aa9.87□□□□□ -0.83
TRAPPC13-206ENST00000504751 SENP2Q9HC62 589 aa9.87□□□□□ -0.83
TRAPPC13-206ENST00000504751 KLK14Q9P0G3 267 aa9.87□□□□□ -0.83
TRAPPC13-206ENST00000504751 DYRK1BQ9Y463 629 aa9.87□□□□□ -0.83
TRAPPC13-206ENST00000504751 GPC6Q9Y625 555 aaPredicted RBP9.87□□□□□ -0.83
TRAPPC13-206ENST00000504751 MPSTP25325 297 aa9.86□□□□□ -0.83
TRAPPC13-206ENST00000504751 Q6ZNB5 142 aa9.86□□□□□ -0.83
TRAPPC13-206ENST00000504751 KIFC2Q96AC6 838 aa9.86□□□□□ -0.83
TRAPPC13-206ENST00000504751 STIM2Q9P246 746 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms