RNA–Protein interactions for RNA: ENST00000504651.5

DDR1-253, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-253ENST00000504651 C8orf58Q8NAV2 365 aa18.04■□□□□ 0.48
DDR1-253ENST00000504651 MYH14Q7Z406 1995 aaKnown RBP18.04■□□□□ 0.48
DDR1-253ENST00000504651 SOS1Q07889 1333 aaPredicted RBP18.03■□□□□ 0.48
DDR1-253ENST00000504651 CNTNAP4Q9C0A0 1308 aa18.03■□□□□ 0.48
DDR1-253ENST00000504651 STARD3NLO95772 234 aa18.03■□□□□ 0.48
DDR1-253ENST00000504651 CYP19A1P11511 503 aaPredicted RBP18.03■□□□□ 0.48
DDR1-253ENST00000504651 TWISTNBQ3B726 338 aaPredicted RBP18.03■□□□□ 0.48
DDR1-253ENST00000504651 TRMT2AQ8IZ69 625 aaKnown RBP18.03■□□□□ 0.48
DDR1-253ENST00000504651 TSPYL6Q8N831 410 aa18.03■□□□□ 0.48
DDR1-253ENST00000504651 USP16Q9Y5T5 823 aa18.03■□□□□ 0.48
DDR1-253ENST00000504651 EIF2S2P20042 333 aaKnown RBP18.02■□□□□ 0.48
DDR1-253ENST00000504651 CRKLP46109 303 aaKnown RBP18.02■□□□□ 0.48
DDR1-253ENST00000504651 AK7Q96M32 723 aa18.02■□□□□ 0.48
DDR1-253ENST00000504651 HDGFL1Q5TGJ6 251 aa18.01■□□□□ 0.47
DDR1-253ENST00000504651 NECTIN2Q92692 538 aa18.01■□□□□ 0.47
DDR1-253ENST00000504651 CCDC87Q9NVE4 849 aa18.01■□□□□ 0.47
DDR1-253ENST00000504651 C4AP0C0L4 1744 aa18.01■□□□□ 0.47
DDR1-253ENST00000504651 ZNF827Q17R98 1081 aa18■□□□□ 0.47
DDR1-253ENST00000504651 ANO8Q9HCE9 1232 aaPredicted RBP18■□□□□ 0.47
DDR1-253ENST00000504651 STK32BQ9NY57 414 aa18■□□□□ 0.47
DDR1-253ENST00000504651 GNPATO15228 680 aa17.99■□□□□ 0.47
DDR1-253ENST00000504651 RC3H1Q5TC82 1133 aaKnown RBP17.99■□□□□ 0.47
DDR1-253ENST00000504651 NBPF14Q5TI25 921 aa17.99■□□□□ 0.47
DDR1-253ENST00000504651 ZBTB1Q9Y2K1 713 aa17.99■□□□□ 0.47
DDR1-253ENST00000504651 ERBB4Q15303 1308 aa17.98■□□□□ 0.47
DDR1-253ENST00000504651 A1BGP04217 495 aa17.98■□□□□ 0.47
DDR1-253ENST00000504651 INTS5Q6P9B9 1019 aaKnown RBP17.98■□□□□ 0.47
DDR1-253ENST00000504651 AKT1S1Q96B36 256 aa17.98■□□□□ 0.47
DDR1-253ENST00000504651 VAMP4O75379 141 aa17.97■□□□□ 0.47
DDR1-253ENST00000504651 CANXP27824 592 aaKnown RBP17.97■□□□□ 0.47
DDR1-253ENST00000504651 PIP4K2AP48426 406 aaPredicted RBP17.97■□□□□ 0.47
DDR1-253ENST00000504651 CCDC30Q5VVM6 783 aa17.97■□□□□ 0.47
DDR1-253ENST00000504651 CHMP4AQ9BY43 222 aa17.97■□□□□ 0.47
DDR1-253ENST00000504651 COL15A1P39059 1388 aa17.96■□□□□ 0.47
DDR1-253ENST00000504651 SLC15A2Q16348 729 aa17.96■□□□□ 0.47
DDR1-253ENST00000504651 TFCP2L1Q9NZI6 479 aa17.96■□□□□ 0.47
DDR1-253ENST00000504651 CHPF2Q9P2E5 772 aa17.96■□□□□ 0.47
DDR1-253ENST00000504651 RTCBQ9Y3I0 505 aaKnown RBP17.96■□□□□ 0.47
DDR1-253ENST00000504651 ZNF330Q9Y3S2 320 aaPredicted RBP17.96■□□□□ 0.47
DDR1-253ENST00000504651 BCORQ6W2J9 1755 aa17.96■□□□□ 0.47
DDR1-253ENST00000504651 SCN7AQ01118 1682 aa17.96■□□□□ 0.47
DDR1-253ENST00000504651 CACNA1FO60840 1977 aa17.95■□□□□ 0.46
DDR1-253ENST00000504651 PHF14O94880 888 aa17.95■□□□□ 0.46
DDR1-253ENST00000504651 CT47B1P0C2W7 299 aaPredicted RBP17.95■□□□□ 0.46
DDR1-253ENST00000504651 MYL6BP14649 208 aa17.95■□□□□ 0.46
DDR1-253ENST00000504651 STK31Q9BXU1 1019 aa17.95■□□□□ 0.46
DDR1-253ENST00000504651 NBPF26B4DH59 902 aa17.94■□□□□ 0.46
DDR1-253ENST00000504651 TCERG1O14776 1098 aaKnown RBP17.94■□□□□ 0.46
DDR1-253ENST00000504651 RPS6KA4O75676 772 aa17.94■□□□□ 0.46
DDR1-253ENST00000504651 IL6STP40189 918 aaPredicted RBP17.94■□□□□ 0.46
DDR1-253ENST00000504651 NBPF10Q6P3W6 841 aaKnown RBP17.94■□□□□ 0.46
DDR1-253ENST00000504651 NPM2Q86SE8 214 aaKnown RBP17.94■□□□□ 0.46
DDR1-253ENST00000504651 NBPF15Q8N660 670 aa17.94■□□□□ 0.46
DDR1-253ENST00000504651 DDX21Q9NR30 783 aaKnown RBP eCLIP17.94■□□□□ 0.46
DDR1-253ENST00000504651 DBF4Q9UBU7 674 aaPredicted RBP17.94■□□□□ 0.46
DDR1-253ENST00000504651 ANXA1P04083 346 aa17.93■□□□□ 0.46
DDR1-253ENST00000504651 SSFA2P28290 1259 aa17.93■□□□□ 0.46
DDR1-253ENST00000504651 CASZ1Q86V15 1759 aa17.93■□□□□ 0.46
DDR1-253ENST00000504651 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.92■□□□□ 0.46
DDR1-253ENST00000504651 PDIA6Q15084 440 aa17.92■□□□□ 0.46
DDR1-253ENST00000504651 PROSER3Q2NL68 480 aa17.92■□□□□ 0.46
DDR1-253ENST00000504651 SMIM5Q71RC9 77 aa17.92■□□□□ 0.46
DDR1-253ENST00000504651 AMIGO3Q86WK7 504 aa17.92■□□□□ 0.46
DDR1-253ENST00000504651 ZNF428Q96B54 188 aa17.92■□□□□ 0.46
DDR1-253ENST00000504651 PNPLA7Q6ZV29 1317 aa17.92■□□□□ 0.46
DDR1-253ENST00000504651 ADRA2BP18089 450 aa17.91■□□□□ 0.46
DDR1-253ENST00000504651 EIF5P55010 431 aaKnown RBP17.91■□□□□ 0.46
DDR1-253ENST00000504651 FLAD1Q8NFF5 587 aa17.91■□□□□ 0.46
DDR1-253ENST00000504651 ARFGEF2Q9Y6D5 1785 aa17.9■□□□□ 0.46
DDR1-253ENST00000504651 HYPKQ9NX55 129 aa17.9■□□□□ 0.46
DDR1-253ENST00000504651 A0A087WZG4 1122 aa17.89■□□□□ 0.45
DDR1-253ENST00000504651 MSH5O43196 834 aa17.89■□□□□ 0.45
DDR1-253ENST00000504651 R3HDM1Q15032 1099 aaKnown RBP17.89■□□□□ 0.45
DDR1-253ENST00000504651 ALDH1L2Q3SY69 923 aa17.89■□□□□ 0.45
DDR1-253ENST00000504651 TRAPPC3LQ5T215 181 aa17.89■□□□□ 0.45
DDR1-253ENST00000504651 ARXQ96QS3 562 aa17.89■□□□□ 0.45
DDR1-253ENST00000504651 BCL2L13Q9BXK5 485 aa17.89■□□□□ 0.45
DDR1-253ENST00000504651 SMC4Q9NTJ3 1288 aa17.89■□□□□ 0.45
DDR1-253ENST00000504651 SLC4A2P04920 1241 aa17.88■□□□□ 0.45
DDR1-253ENST00000504651 LRP10Q7Z4F1 713 aa17.88■□□□□ 0.45
DDR1-253ENST00000504651 DZIP3Q86Y13 1208 aaKnown RBP17.88■□□□□ 0.45
DDR1-253ENST00000504651 SSH1Q8WYL5 1049 aa17.88■□□□□ 0.45
DDR1-253ENST00000504651 ARHGEF1Q92888 912 aaKnown RBP17.88■□□□□ 0.45
DDR1-253ENST00000504651 ANKRD36CQ5JPF3 1778 aa17.88■□□□□ 0.45
DDR1-253ENST00000504651 PSDA5PKW4 1024 aaPredicted RBP17.87■□□□□ 0.45
DDR1-253ENST00000504651 RFC4P35249 363 aa17.87■□□□□ 0.45
DDR1-253ENST00000504651 RARSP54136 660 aaKnown RBP17.87■□□□□ 0.45
DDR1-253ENST00000504651 AIMP1Q12904 312 aaKnown RBP17.87■□□□□ 0.45
DDR1-253ENST00000504651 KIF6Q6ZMV9 814 aa17.87■□□□□ 0.45
DDR1-253ENST00000504651 COL23A1Q86Y22 540 aaPredicted RBP17.87■□□□□ 0.45
DDR1-253ENST00000504651 XAGE3Q8WTP9 111 aa17.87■□□□□ 0.45
DDR1-253ENST00000504651 PHAXQ9H814 394 aaKnown RBP17.87■□□□□ 0.45
DDR1-253ENST00000504651 COPS6Q7L5N1 327 aa17.86■□□□□ 0.45
DDR1-253ENST00000504651 TBC1D2BQ9UPU7 963 aa17.86■□□□□ 0.45
DDR1-253ENST00000504651 USP42Q9H9J4 1324 aaKnown RBP17.86■□□□□ 0.45
DDR1-253ENST00000504651 NUP98P52948 1817 aa17.86■□□□□ 0.45
DDR1-253ENST00000504651 ZPR1O75312 459 aa17.85■□□□□ 0.45
DDR1-253ENST00000504651 TTLL7Q6ZT98 887 aa17.85■□□□□ 0.45
DDR1-253ENST00000504651 MRPL50Q8N5N7 158 aaKnown RBP17.85■□□□□ 0.45
DDR1-253ENST00000504651 SRP68Q9UHB9 627 aaKnown RBP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms