RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 PNNQ9H307 717 aaKnown RBP18.86■□□□□ 0.61
HOXC9-202ENST00000504557 MIS18AQ9NYP9 233 aa18.86■□□□□ 0.61
HOXC9-202ENST00000504557 COL15A1P39059 1388 aa18.85■□□□□ 0.61
HOXC9-202ENST00000504557 SOS1Q07889 1333 aaPredicted RBP18.85■□□□□ 0.61
HOXC9-202ENST00000504557 ZPR1O75312 459 aa18.85■□□□□ 0.61
HOXC9-202ENST00000504557 STARD3NLO95772 234 aa18.85■□□□□ 0.61
HOXC9-202ENST00000504557 WDR43Q15061 677 aaKnown RBP eCLIP18.85■□□□□ 0.61
HOXC9-202ENST00000504557 NFE2L2Q16236 605 aa18.85■□□□□ 0.61
HOXC9-202ENST00000504557 NLGN1Q8N2Q7 840 aa18.85■□□□□ 0.61
HOXC9-202ENST00000504557 PRKRIP1Q9H875 184 aaPredicted RBP18.85■□□□□ 0.61
HOXC9-202ENST00000504557 USP42Q9H9J4 1324 aaKnown RBP18.84■□□□□ 0.61
HOXC9-202ENST00000504557 USPL1Q5W0Q7 1092 aa18.84■□□□□ 0.61
HOXC9-202ENST00000504557 CD2APQ9Y5K6 639 aa18.84■□□□□ 0.61
HOXC9-202ENST00000504557 HTATSF1O43719 755 aaKnown RBP18.83■□□□□ 0.6
HOXC9-202ENST00000504557 FKBP8Q14318 412 aa18.83■□□□□ 0.6
HOXC9-202ENST00000504557 RRP7AQ9Y3A4 280 aaKnown RBP18.83■□□□□ 0.6
HOXC9-202ENST00000504557 PARP3Q9Y6F1 533 aa18.83■□□□□ 0.6
HOXC9-202ENST00000504557 PRAMEF22A3QJZ6 481 aa18.82■□□□□ 0.6
HOXC9-202ENST00000504557 ZNF316A6NFI3 1004 aaPredicted RBP18.82■□□□□ 0.6
HOXC9-202ENST00000504557 PIP4K2AP48426 406 aaPredicted RBP18.82■□□□□ 0.6
HOXC9-202ENST00000504557 NEUROD2Q15784 382 aa18.82■□□□□ 0.6
HOXC9-202ENST00000504557 KIF13BQ9NQT8 1826 aa18.81■□□□□ 0.6
HOXC9-202ENST00000504557 KDM3BQ7LBC6 1761 aa18.81■□□□□ 0.6
HOXC9-202ENST00000504557 A1BGP04217 495 aa18.81■□□□□ 0.6
HOXC9-202ENST00000504557 RIPK4P57078 832 aa18.81■□□□□ 0.6
HOXC9-202ENST00000504557 TAF7Q15545 349 aaPredicted RBP18.81■□□□□ 0.6
HOXC9-202ENST00000504557 TEX13AQ9BXU3 409 aaPredicted RBP18.81■□□□□ 0.6
HOXC9-202ENST00000504557 AFDNP55196 1824 aaKnown RBP18.81■□□□□ 0.6
HOXC9-202ENST00000504557 YBX3P16989 372 aaKnown RBP eCLIP18.8■□□□□ 0.6
HOXC9-202ENST00000504557 USP16Q9Y5T5 823 aa18.8■□□□□ 0.6
HOXC9-202ENST00000504557 NPM2Q86SE8 214 aaKnown RBP18.79■□□□□ 0.6
HOXC9-202ENST00000504557 DDR1Q08345 913 aa18.78■□□□□ 0.6
HOXC9-202ENST00000504557 BICDL1Q6ZP65 573 aa18.78■□□□□ 0.6
HOXC9-202ENST00000504557 NARFQ9UHQ1 456 aa18.78■□□□□ 0.6
HOXC9-202ENST00000504557 ADAMTS8Q9UP79 889 aa18.78■□□□□ 0.6
HOXC9-202ENST00000504557 TBC1D2BQ9UPU7 963 aa18.78■□□□□ 0.6
HOXC9-202ENST00000504557 LAMB4A4D0S4 1761 aa18.78■□□□□ 0.6
HOXC9-202ENST00000504557 SNRPA1P09661 255 aaKnown RBP18.77■□□□□ 0.6
HOXC9-202ENST00000504557 TMPOP42166 694 aaKnown RBP18.77■□□□□ 0.6
HOXC9-202ENST00000504557 KIAA1551Q9HCM1 1747 aa18.77■□□□□ 0.59
HOXC9-202ENST00000504557 A0A0G2JLW4 131 aa18.76■□□□□ 0.59
HOXC9-202ENST00000504557 EIF5P55010 431 aaKnown RBP18.76■□□□□ 0.59
HOXC9-202ENST00000504557 SCN7AQ01118 1682 aa18.76■□□□□ 0.59
HOXC9-202ENST00000504557 A0A087WZG4 1122 aa18.75■□□□□ 0.59
HOXC9-202ENST00000504557 PNISRQ8TF01 805 aaKnown RBP18.75■□□□□ 0.59
HOXC9-202ENST00000504557 RUNDC1Q96C34 613 aa18.75■□□□□ 0.59
HOXC9-202ENST00000504557 C10orf71Q711Q0 1435 aa18.74■□□□□ 0.59
HOXC9-202ENST00000504557 GOLGB1Q14789 3259 aaKnown RBP18.74■□□□□ 0.59
HOXC9-202ENST00000504557 PXDNLA1KZ92 1463 aa18.74■□□□□ 0.59
HOXC9-202ENST00000504557 POLRMTO00411 1230 aaKnown RBP18.74■□□□□ 0.59
HOXC9-202ENST00000504557 NFIXQ14938 502 aa18.74■□□□□ 0.59
HOXC9-202ENST00000504557 BCL2L12Q9HB09 334 aa18.74■□□□□ 0.59
HOXC9-202ENST00000504557 LAS1LQ9Y4W2 734 aaKnown RBP18.74■□□□□ 0.59
HOXC9-202ENST00000504557 UTRNP46939 3433 aa18.74■□□□□ 0.59
HOXC9-202ENST00000504557 BCORQ6W2J9 1755 aa18.73■□□□□ 0.59
HOXC9-202ENST00000504557 IL6STP40189 918 aaPredicted RBP18.73■□□□□ 0.59
HOXC9-202ENST00000504557 NGEFQ8N5V2 710 aa18.73■□□□□ 0.59
HOXC9-202ENST00000504557 TSPYL4Q9UJ04 414 aa18.73■□□□□ 0.59
HOXC9-202ENST00000504557 BRCA1P38398 1863 aaKnown RBP18.72■□□□□ 0.59
HOXC9-202ENST00000504557 SENP3-EIF4A1A0A087X0R7 540 aa18.72■□□□□ 0.59
HOXC9-202ENST00000504557 GRIN3BO60391 1043 aa18.72■□□□□ 0.59
HOXC9-202ENST00000504557 DPEP1P16444 411 aa18.72■□□□□ 0.59
HOXC9-202ENST00000504557 TM4SF1P30408 202 aa18.72■□□□□ 0.59
HOXC9-202ENST00000504557 LMOD3Q0VAK6 560 aa18.72■□□□□ 0.59
HOXC9-202ENST00000504557 DZIP3Q86Y13 1208 aaKnown RBP18.72■□□□□ 0.59
HOXC9-202ENST00000504557 CCDC184Q52MB2 194 aa18.71■□□□□ 0.59
HOXC9-202ENST00000504557 TBC1D9BQ66K14 1250 aa18.71■□□□□ 0.59
HOXC9-202ENST00000504557 BCS1LQ9Y276 419 aa18.71■□□□□ 0.59
HOXC9-202ENST00000504557 SERPINB2P05120 415 aa18.7■□□□□ 0.58
HOXC9-202ENST00000504557 EIF4A1P60842 406 aaKnown RBP18.7■□□□□ 0.58
HOXC9-202ENST00000504557 TGFB2P61812 414 aa18.7■□□□□ 0.58
HOXC9-202ENST00000504557 NBPF26B4DH59 902 aa18.69■□□□□ 0.58
HOXC9-202ENST00000504557 NPHP1O15259 732 aa18.69■□□□□ 0.58
HOXC9-202ENST00000504557 ANP32CO43423 234 aa18.69■□□□□ 0.58
HOXC9-202ENST00000504557 CHRNA5P30532 468 aa18.69■□□□□ 0.58
HOXC9-202ENST00000504557 NBPF10Q6P3W6 841 aaKnown RBP18.69■□□□□ 0.58
HOXC9-202ENST00000504557 CCDC24Q8N4L8 307 aa18.69■□□□□ 0.58
HOXC9-202ENST00000504557 NBPF15Q8N660 670 aa18.69■□□□□ 0.58
HOXC9-202ENST00000504557 NRXN2Q9P2S2 1712 aa18.69■□□□□ 0.58
HOXC9-202ENST00000504557 GIGYF1O75420 1035 aaPredicted RBP18.68■□□□□ 0.58
HOXC9-202ENST00000504557 MYL6BP14649 208 aa18.68■□□□□ 0.58
HOXC9-202ENST00000504557 CACNA1SQ13698 1873 aa18.67■□□□□ 0.58
HOXC9-202ENST00000504557 CAMTA2O94983 1202 aa18.67■□□□□ 0.58
HOXC9-202ENST00000504557 EIF2S2P20042 333 aaKnown RBP18.67■□□□□ 0.58
HOXC9-202ENST00000504557 TRIM35Q9UPQ4 493 aa18.67■□□□□ 0.58
HOXC9-202ENST00000504557 ANKRD31Q8N7Z5 1873 aa18.67■□□□□ 0.58
HOXC9-202ENST00000504557 NUP98P52948 1817 aa18.66■□□□□ 0.58
HOXC9-202ENST00000504557 APAF1O14727 1248 aa18.66■□□□□ 0.58
HOXC9-202ENST00000504557 NECTIN2Q92692 538 aa18.66■□□□□ 0.58
HOXC9-202ENST00000504557 CARMIL3Q8ND23 1372 aa18.66■□□□□ 0.58
HOXC9-202ENST00000504557 ARFGEF1Q9Y6D6 1849 aa18.65■□□□□ 0.58
HOXC9-202ENST00000504557 ZNF784Q8NCA9 323 aaPredicted RBP18.65■□□□□ 0.58
HOXC9-202ENST00000504557 SETDB2Q96T68 719 aa18.65■□□□□ 0.58
HOXC9-202ENST00000504557 MRS2Q9HD23 443 aa18.65■□□□□ 0.58
HOXC9-202ENST00000504557 FAM177BA6PVY3 158 aa18.64■□□□□ 0.57
HOXC9-202ENST00000504557 PIM2Q9P1W9 311 aa18.64■□□□□ 0.57
HOXC9-202ENST00000504557 DLEC1Q9Y238 1755 aa18.63■□□□□ 0.57
HOXC9-202ENST00000504557 KCNA3P22001 575 aa18.63■□□□□ 0.57
HOXC9-202ENST00000504557 KRT24Q2M2I5 525 aa18.63■□□□□ 0.57
HOXC9-202ENST00000504557 ARHGAP27Q6ZUM4 889 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms