RNA–Protein interactions for RNA: ENST00000504466.1

HMGCR-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 1,107 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-204ENST00000504466 NEDD1Q8NHV4 660 aa8.6□□□□□ -1.03
HMGCR-204ENST00000504466 C1orf216Q8TAB5 229 aa8.6□□□□□ -1.03
HMGCR-204ENST00000504466 SLC4A9Q96Q91 983 aa8.6□□□□□ -1.03
HMGCR-204ENST00000504466 RUBCNLQ9H714 662 aa8.6□□□□□ -1.03
HMGCR-204ENST00000504466 C1orf115Q9H7X2 142 aa8.6□□□□□ -1.03
HMGCR-204ENST00000504466 EFHC2Q5JST6 749 aa8.59□□□□□ -1.03
HMGCR-204ENST00000504466 GPAT2Q6NUI2 795 aa8.59□□□□□ -1.03
HMGCR-204ENST00000504466 C1orf229Q6ZS94 237 aaPredicted RBP8.59□□□□□ -1.03
HMGCR-204ENST00000504466 DCAF5Q96JK2 942 aa8.59□□□□□ -1.03
HMGCR-204ENST00000504466 DNAAF2Q9NVR5 837 aaKnown RBP8.59□□□□□ -1.03
HMGCR-204ENST00000504466 GDF2Q9UK05 429 aaPredicted RBP8.59□□□□□ -1.03
HMGCR-204ENST00000504466 COG6Q9Y2V7 657 aa8.59□□□□□ -1.03
HMGCR-204ENST00000504466 C2CD2LO14523 706 aa8.58□□□□□ -1.04
HMGCR-204ENST00000504466 SMTNP53814 917 aa8.58□□□□□ -1.04
HMGCR-204ENST00000504466 SEMA3FQ13275 785 aa8.58□□□□□ -1.04
HMGCR-204ENST00000504466 MTFR1Q15390 333 aa8.58□□□□□ -1.04
HMGCR-204ENST00000504466 PODNQ7Z5L7 613 aa8.58□□□□□ -1.04
HMGCR-204ENST00000504466 FNBP4Q8N3X1 1017 aaPredicted RBP8.58□□□□□ -1.04
HMGCR-204ENST00000504466 ABCC8Q09428 1581 aa8.57□□□□□ -1.04
HMGCR-204ENST00000504466 TMEM229AB2RXF0 380 aa8.57□□□□□ -1.04
HMGCR-204ENST00000504466 SHISA8B8ZZ34 492 aa8.57□□□□□ -1.04
HMGCR-204ENST00000504466 BNIP3LO60238 219 aa8.57□□□□□ -1.04
HMGCR-204ENST00000504466 ITGB2P05107 769 aa8.57□□□□□ -1.04
HMGCR-204ENST00000504466 ATP4AP20648 1035 aa8.57□□□□□ -1.04
HMGCR-204ENST00000504466 NIFKQ9BYG3 293 aaKnown RBP8.57□□□□□ -1.04
HMGCR-204ENST00000504466 IQSEC3Q9UPP2 1182 aaPredicted RBP8.57□□□□□ -1.04
HMGCR-204ENST00000504466 PCDHGA11Q9Y5H2 935 aa8.57□□□□□ -1.04
HMGCR-204ENST00000504466 CDK2AP1O14519 115 aa8.56□□□□□ -1.04
HMGCR-204ENST00000504466 PLA2G4EQ3MJ16 856 aa8.56□□□□□ -1.04
HMGCR-204ENST00000504466 TBC1D9Q6ZT07 1266 aa8.56□□□□□ -1.04
HMGCR-204ENST00000504466 NLRP8Q86W28 1048 aa8.56□□□□□ -1.04
HMGCR-204ENST00000504466 GOLGA6L1Q8N7Z2 621 aa8.56□□□□□ -1.04
HMGCR-204ENST00000504466 ARID3AQ99856 593 aa8.56□□□□□ -1.04
HMGCR-204ENST00000504466 LZTS3O60299 673 aaPredicted RBP8.55□□□□□ -1.04
HMGCR-204ENST00000504466 HOXB4P17483 251 aaPredicted RBP8.55□□□□□ -1.04
HMGCR-204ENST00000504466 FGFR3P22607 806 aa8.55□□□□□ -1.04
HMGCR-204ENST00000504466 PLA2G4AP47712 749 aa8.55□□□□□ -1.04
HMGCR-204ENST00000504466 SNRPNP63162 240 aaKnown RBP8.55□□□□□ -1.04
HMGCR-204ENST00000504466 FIGNL1Q6PIW4 674 aa8.55□□□□□ -1.04
HMGCR-204ENST00000504466 WWC1Q8IX03 1113 aa8.55□□□□□ -1.04
HMGCR-204ENST00000504466 NFATC2IPQ8NCF5 419 aa8.55□□□□□ -1.04
HMGCR-204ENST00000504466 GALNT6Q8NCL4 622 aa8.55□□□□□ -1.04
HMGCR-204ENST00000504466 ABHD17AQ96GS6 310 aa8.55□□□□□ -1.04
HMGCR-204ENST00000504466 ALG2Q9H553 416 aa8.55□□□□□ -1.04
HMGCR-204ENST00000504466 CTBSQ01459 385 aa8.54□□□□□ -1.04
HMGCR-204ENST00000504466 SLCO4C1Q6ZQN7 724 aa8.54□□□□□ -1.04
HMGCR-204ENST00000504466 EDARADDQ8WWZ3 215 aa8.54□□□□□ -1.04
HMGCR-204ENST00000504466 ZCCHC2Q9C0B9 1178 aaKnown RBP8.54□□□□□ -1.04
HMGCR-204ENST00000504466 PCDHGC4Q9Y5F7 938 aa8.54□□□□□ -1.04
HMGCR-204ENST00000504466 A6NJY4 79 aa8.53□□□□□ -1.04
HMGCR-204ENST00000504466 PIK3CDO00329 1044 aa8.53□□□□□ -1.04
HMGCR-204ENST00000504466 BMP4P12644 408 aa8.53□□□□□ -1.04
HMGCR-204ENST00000504466 ZNF777Q9ULD5 760 aaPredicted RBP8.53□□□□□ -1.04
HMGCR-204ENST00000504466 CFTRP13569 1480 aa8.52□□□□□ -1.05
HMGCR-204ENST00000504466 ARAFP10398 606 aa8.52□□□□□ -1.05
HMGCR-204ENST00000504466 FAM182BQ5T319 152 aa8.52□□□□□ -1.05
HMGCR-204ENST00000504466 ALYREFQ86V81 257 aaKnown RBP8.52□□□□□ -1.05
HMGCR-204ENST00000504466 ZDHHC3Q9NYG2 299 aa8.52□□□□□ -1.05
HMGCR-204ENST00000504466 HCN2Q9UL51 889 aa8.52□□□□□ -1.05
HMGCR-204ENST00000504466 MKL2Q9ULH7 1088 aa8.52□□□□□ -1.05
HMGCR-204ENST00000504466 MSTNO14793 375 aa8.51□□□□□ -1.05
HMGCR-204ENST00000504466 LINC00114Q6XXX2 140 aa8.51□□□□□ -1.05
HMGCR-204ENST00000504466 SPOCK3Q9BQ16 436 aa8.51□□□□□ -1.05
HMGCR-204ENST00000504466 GGA1Q9UJY5 639 aa8.51□□□□□ -1.05
HMGCR-204ENST00000504466 PROCP04070 461 aa8.5□□□□□ -1.05
HMGCR-204ENST00000504466 EPXP11678 715 aa8.5□□□□□ -1.05
HMGCR-204ENST00000504466 TNP2Q05952 138 aa8.5□□□□□ -1.05
HMGCR-204ENST00000504466 EML3Q32P44 896 aa8.5□□□□□ -1.05
HMGCR-204ENST00000504466 CCDC82Q8N4S0 544 aa8.5□□□□□ -1.05
HMGCR-204ENST00000504466 SERTAD1Q9UHV2 236 aa8.5□□□□□ -1.05
HMGCR-204ENST00000504466 USP3Q9Y6I4 520 aa8.5□□□□□ -1.05
HMGCR-204ENST00000504466 WRNQ14191 1432 aaPredicted RBP eCLIP8.49□□□□□ -1.05
HMGCR-204ENST00000504466 A0A1W2PNR3 127 aa8.49□□□□□ -1.05
HMGCR-204ENST00000504466 LOC105371045A0A1W2PR82 267 aa8.49□□□□□ -1.05
HMGCR-204ENST00000504466 ATXN7O15265 892 aaPredicted RBP8.49□□□□□ -1.05
HMGCR-204ENST00000504466 NBPF1Q3BBV0 1214 aa8.49□□□□□ -1.05
HMGCR-204ENST00000504466 AVENQ9NQS1 362 aaPredicted RBP8.49□□□□□ -1.05
HMGCR-204ENST00000504466 SYNJ1O43426 1573 aa8.48□□□□□ -1.05
HMGCR-204ENST00000504466 BACH1O14867 736 aa8.48□□□□□ -1.05
HMGCR-204ENST00000504466 MAPTP10636 758 aaKnown RBP8.48□□□□□ -1.05
HMGCR-204ENST00000504466 COL8A1P27658 744 aa8.48□□□□□ -1.05
HMGCR-204ENST00000504466 SAMD5Q5TGI4 173 aa8.48□□□□□ -1.05
HMGCR-204ENST00000504466 AIDAQ96BJ3 306 aa8.48□□□□□ -1.05
HMGCR-204ENST00000504466 BTBD6Q96KE9 485 aa8.48□□□□□ -1.05
HMGCR-204ENST00000504466 ZIC5Q96T25 663 aa8.48□□□□□ -1.05
HMGCR-204ENST00000504466 SCHIP1Q9P0W5 487 aaPredicted RBP8.48□□□□□ -1.05
HMGCR-204ENST00000504466 NOD1Q9Y239 953 aa8.48□□□□□ -1.05
HMGCR-204ENST00000504466 PRDM2Q13029 1718 aa8.48□□□□□ -1.05
HMGCR-204ENST00000504466 CADPSQ9ULU8 1353 aa8.48□□□□□ -1.05
HMGCR-204ENST00000504466 KRBA1A5PL33 1030 aa8.47□□□□□ -1.05
HMGCR-204ENST00000504466 FAM157BP0CG42 384 aa8.47□□□□□ -1.05
HMGCR-204ENST00000504466 SKIP12755 728 aa8.47□□□□□ -1.05
HMGCR-204ENST00000504466 EPHA4P54764 986 aa8.47□□□□□ -1.05
HMGCR-204ENST00000504466 GTF2IP78347 998 aa8.47□□□□□ -1.05
HMGCR-204ENST00000504466 CCDC97Q96F63 343 aaPredicted RBP8.47□□□□□ -1.05
HMGCR-204ENST00000504466 KLF15Q9UIH9 416 aa8.47□□□□□ -1.05
HMGCR-204ENST00000504466 TATP17735 454 aaPredicted RBP8.46□□□□□ -1.06
HMGCR-204ENST00000504466 NCOA4Q13772 614 aa8.46□□□□□ -1.06
HMGCR-204ENST00000504466 ZNF358Q9NW07 568 aa8.46□□□□□ -1.06
HMGCR-204ENST00000504466 SERPINA10Q9UK55 444 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms