RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 IQSEC3Q9UPP2 1182 aaPredicted RBP8.74□□□□□ -1.01
TRAPPC13-205ENST00000504243 A0A1B0GTH6 734 aa8.73□□□□□ -1.01
TRAPPC13-205ENST00000504243 LGR5O75473 907 aa8.73□□□□□ -1.01
TRAPPC13-205ENST00000504243 PHKA2P46019 1235 aa8.73□□□□□ -1.01
TRAPPC13-205ENST00000504243 FOXK2Q01167 660 aa8.73□□□□□ -1.01
TRAPPC13-205ENST00000504243 TSEN2Q8NCE0 465 aaKnown RBP8.73□□□□□ -1.01
TRAPPC13-205ENST00000504243 PRMT3O60678 531 aa8.72□□□□□ -1.01
TRAPPC13-205ENST00000504243 ITGA6P23229 1130 aa8.72□□□□□ -1.01
TRAPPC13-205ENST00000504243 ATP2B4P23634 1241 aa8.72□□□□□ -1.01
TRAPPC13-205ENST00000504243 GMCL1Q96IK5 515 aa8.72□□□□□ -1.01
TRAPPC13-205ENST00000504243 CABP1Q9NZU7 370 aa8.72□□□□□ -1.01
TRAPPC13-205ENST00000504243 CHMP3Q9Y3E7 222 aa8.72□□□□□ -1.01
TRAPPC13-205ENST00000504243 CCDC9Q9Y3X0 531 aaKnown RBP8.72□□□□□ -1.01
TRAPPC13-205ENST00000504243 IVNS1ABPQ9Y6Y0 642 aa8.72□□□□□ -1.01
TRAPPC13-205ENST00000504243 WFS1O76024 890 aa8.71□□□□□ -1.02
TRAPPC13-205ENST00000504243 F11P03951 625 aa8.71□□□□□ -1.02
TRAPPC13-205ENST00000504243 PLA2G4AP47712 749 aa8.71□□□□□ -1.02
TRAPPC13-205ENST00000504243 NFX1Q12986 1120 aaKnown RBP8.71□□□□□ -1.02
TRAPPC13-205ENST00000504243 SWI5Q1ZZU3 235 aa8.71□□□□□ -1.02
TRAPPC13-205ENST00000504243 SLC9A9Q8IVB4 645 aa8.71□□□□□ -1.02
TRAPPC13-205ENST00000504243 GAS2L2Q8NHY3 880 aa8.71□□□□□ -1.02
TRAPPC13-205ENST00000504243 IRF7Q92985 503 aa8.71□□□□□ -1.02
TRAPPC13-205ENST00000504243 CLP1Q92989 425 aaKnown RBP8.71□□□□□ -1.02
TRAPPC13-205ENST00000504243 GAS2L1Q99501 681 aaPredicted RBP8.71□□□□□ -1.02
TRAPPC13-205ENST00000504243 H7C1W4 665 aa8.7□□□□□ -1.02
TRAPPC13-205ENST00000504243 VEGFBP49765 207 aa8.7□□□□□ -1.02
TRAPPC13-205ENST00000504243 TEAD4Q15561 434 aa8.7□□□□□ -1.02
TRAPPC13-205ENST00000504243 TREML4Q6UXN2 200 aa8.7□□□□□ -1.02
TRAPPC13-205ENST00000504243 C1orf216Q8TAB5 229 aa8.7□□□□□ -1.02
TRAPPC13-205ENST00000504243 NANOS1Q8WY41 292 aaKnown RBP8.7□□□□□ -1.02
TRAPPC13-205ENST00000504243 PRIMPOLQ96LW4 560 aa8.7□□□□□ -1.02
TRAPPC13-205ENST00000504243 PSMA6P60900 246 aaKnown RBP8.69□□□□□ -1.02
TRAPPC13-205ENST00000504243 FAM69CQ0P6D2 419 aa8.69□□□□□ -1.02
TRAPPC13-205ENST00000504243 NBPF1Q3BBV0 1214 aa8.69□□□□□ -1.02
TRAPPC13-205ENST00000504243 TMCO4Q5TGY1 634 aa8.69□□□□□ -1.02
TRAPPC13-205ENST00000504243 ZNF295-AS1Q8N0V1 137 aa8.69□□□□□ -1.02
TRAPPC13-205ENST00000504243 CCER1Q8TC90 406 aaPredicted RBP8.69□□□□□ -1.02
TRAPPC13-205ENST00000504243 TSPAN10Q9H1Z9 355 aaPredicted RBP8.69□□□□□ -1.02
TRAPPC13-205ENST00000504243 ZDHHC3Q9NYG2 299 aa8.69□□□□□ -1.02
TRAPPC13-205ENST00000504243 USP3Q9Y6I4 520 aa8.69□□□□□ -1.02
TRAPPC13-205ENST00000504243 NOS2P35228 1153 aa8.68□□□□□ -1.02
TRAPPC13-205ENST00000504243 RIPOR1Q6ZS17 1223 aa8.68□□□□□ -1.02
TRAPPC13-205ENST00000504243 TRIM22Q8IYM9 498 aa8.68□□□□□ -1.02
TRAPPC13-205ENST00000504243 PGBD3Q8N328 593 aa8.68□□□□□ -1.02
TRAPPC13-205ENST00000504243 L3MBTL2Q969R5 705 aa8.68□□□□□ -1.02
TRAPPC13-205ENST00000504243 AIDAQ96BJ3 306 aa8.68□□□□□ -1.02
TRAPPC13-205ENST00000504243 ATAD2Q6PL18 1390 aa8.68□□□□□ -1.02
TRAPPC13-205ENST00000504243 SERTM1A2A2V5 107 aa8.67□□□□□ -1.02
TRAPPC13-205ENST00000504243 PPP1R12BO60237 982 aaPredicted RBP8.67□□□□□ -1.02
TRAPPC13-205ENST00000504243 VSIG8P0DPA2 414 aa8.67□□□□□ -1.02
TRAPPC13-205ENST00000504243 TATP17735 454 aaPredicted RBP8.67□□□□□ -1.02
TRAPPC13-205ENST00000504243 SSFA2P28290 1259 aa8.67□□□□□ -1.02
TRAPPC13-205ENST00000504243 MSX1P28360 303 aa8.67□□□□□ -1.02
TRAPPC13-205ENST00000504243 ARID4AP29374 1257 aaPredicted RBP8.67□□□□□ -1.02
TRAPPC13-205ENST00000504243 TBCELQ5QJ74 424 aa8.67□□□□□ -1.02
TRAPPC13-205ENST00000504243 SV2AQ7L0J3 742 aa8.67□□□□□ -1.02
TRAPPC13-205ENST00000504243 STAG2Q8N3U4 1231 aa8.67□□□□□ -1.02
TRAPPC13-205ENST00000504243 SLAIN2Q9P270 581 aa8.67□□□□□ -1.02
TRAPPC13-205ENST00000504243 ZNF232Q9UNY5 417 aa8.67□□□□□ -1.02
TRAPPC13-205ENST00000504243 CDC14CA4D256 554 aa8.66□□□□□ -1.02
TRAPPC13-205ENST00000504243 IGFBP4P22692 258 aa8.66□□□□□ -1.02
TRAPPC13-205ENST00000504243 LBRQ14739 615 aaKnown RBP8.66□□□□□ -1.02
TRAPPC13-205ENST00000504243 SCG3Q8WXD2 468 aaKnown RBP8.66□□□□□ -1.02
TRAPPC13-205ENST00000504243 FOXR1Q6PIV2 292 aa8.65□□□□□ -1.02
TRAPPC13-205ENST00000504243 VWA5B2Q8N398 1253 aa8.65□□□□□ -1.02
TRAPPC13-205ENST00000504243 ZDHHC1Q8WTX9 485 aa8.65□□□□□ -1.02
TRAPPC13-205ENST00000504243 CRISPLD1Q9H336 500 aa8.65□□□□□ -1.02
TRAPPC13-205ENST00000504243 GPAMQ9HCL2 828 aa8.65□□□□□ -1.02
TRAPPC13-205ENST00000504243 MTMR7Q9Y216 660 aa8.65□□□□□ -1.02
TRAPPC13-205ENST00000504243 PARP3Q9Y6F1 533 aa8.65□□□□□ -1.02
TRAPPC13-205ENST00000504243 EML1O00423 815 aa8.64□□□□□ -1.03
TRAPPC13-205ENST00000504243 C21orf2O43822 256 aa8.64□□□□□ -1.03
TRAPPC13-205ENST00000504243 HIRAP54198 1017 aaPredicted RBP8.64□□□□□ -1.03
TRAPPC13-205ENST00000504243 DBN1Q16643 649 aa8.64□□□□□ -1.03
TRAPPC13-205ENST00000504243 EFHC2Q5JST6 749 aa8.64□□□□□ -1.03
TRAPPC13-205ENST00000504243 PHLDB3Q6NSJ2 640 aa8.64□□□□□ -1.03
TRAPPC13-205ENST00000504243 POTEAQ6S8J7 498 aa8.64□□□□□ -1.03
TRAPPC13-205ENST00000504243 CHMP7Q8WUX9 453 aaPredicted RBP8.64□□□□□ -1.03
TRAPPC13-205ENST00000504243 NUCKS1Q9H1E3 243 aaKnown RBP8.64□□□□□ -1.03
TRAPPC13-205ENST00000504243 CUEDC1Q9NWM3 386 aaPredicted RBP8.64□□□□□ -1.03
TRAPPC13-205ENST00000504243 WEE1P30291 646 aa8.63□□□□□ -1.03
TRAPPC13-205ENST00000504243 SCNN1AP37088 669 aa8.63□□□□□ -1.03
TRAPPC13-205ENST00000504243 LCE2AQ5TA79 106 aaPredicted RBP8.63□□□□□ -1.03
TRAPPC13-205ENST00000504243 C1orf53Q5VUE5 145 aa8.63□□□□□ -1.03
TRAPPC13-205ENST00000504243 ZNF837Q96EG3 531 aaPredicted RBP8.63□□□□□ -1.03
TRAPPC13-205ENST00000504243 MKNK1Q9BUB5 465 aa8.63□□□□□ -1.03
TRAPPC13-205ENST00000504243 C2orf49Q9BVC5 232 aaPredicted RBP8.63□□□□□ -1.03
TRAPPC13-205ENST00000504243 RUBCNLQ9H714 662 aa8.63□□□□□ -1.03
TRAPPC13-205ENST00000504243 CXXC1Q9P0U4 656 aaPredicted RBP8.63□□□□□ -1.03
TRAPPC13-205ENST00000504243 GPC6Q9Y625 555 aaPredicted RBP8.63□□□□□ -1.03
TRAPPC13-205ENST00000504243 ERBB4Q15303 1308 aa8.62□□□□□ -1.03
TRAPPC13-205ENST00000504243 FOXO3O43524 673 aa8.62□□□□□ -1.03
TRAPPC13-205ENST00000504243 ABL1P00519 1130 aa8.62□□□□□ -1.03
TRAPPC13-205ENST00000504243 ATP4AP20648 1035 aa8.62□□□□□ -1.03
TRAPPC13-205ENST00000504243 ARSJQ5FYB0 599 aaPredicted RBP8.62□□□□□ -1.03
TRAPPC13-205ENST00000504243 VTI1AQ96AJ9 217 aa8.62□□□□□ -1.03
TRAPPC13-205ENST00000504243 TXLNAP40222 546 aa8.61□□□□□ -1.03
TRAPPC13-205ENST00000504243 FIGNL1Q6PIW4 674 aa8.61□□□□□ -1.03
TRAPPC13-205ENST00000504243 BICDL1Q6ZP65 573 aa8.61□□□□□ -1.03
TRAPPC13-205ENST00000504243 NLRP8Q86W28 1048 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms