RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 SPON1Q9HCB6 807 aa5.46□□□□□ -1.54
USP46-205ENST00000504078 PCDHB3Q9Y5E6 796 aa5.46□□□□□ -1.54
USP46-205ENST00000504078 ADGRB1O14514 1584 aa5.46□□□□□ -1.54
USP46-205ENST00000504078 GPRASP1Q5JY77 1395 aa5.45□□□□□ -1.54
USP46-205ENST00000504078 PARD3Q8TEW0 1356 aa5.45□□□□□ -1.54
USP46-205ENST00000504078 ANKRD30BQ9BXX2 1392 aa5.45□□□□□ -1.54
USP46-205ENST00000504078 DLC1Q96QB1 1528 aa5.45□□□□□ -1.54
USP46-205ENST00000504078 KCNQ2O43526 872 aa5.45□□□□□ -1.54
USP46-205ENST00000504078 AVPP01185 164 aa5.45□□□□□ -1.54
USP46-205ENST00000504078 LARP1Q6PKG0 1096 aaKnown RBP5.45□□□□□ -1.54
USP46-205ENST00000504078 POGKQ9P215 609 aa5.45□□□□□ -1.54
USP46-205ENST00000504078 RGPD3A6NKT7 1758 aaPredicted RBP5.44□□□□□ -1.54
USP46-205ENST00000504078 AKAP12Q02952 1782 aa5.44□□□□□ -1.54
USP46-205ENST00000504078 RGPD4Q7Z3J3 1758 aa5.44□□□□□ -1.54
USP46-205ENST00000504078 SBF2Q86WG5 1849 aa5.44□□□□□ -1.54
USP46-205ENST00000504078 SPDYE16A6NNV3 312 aaPredicted RBP5.44□□□□□ -1.54
USP46-205ENST00000504078 SLC24A1O60721 1099 aa5.44□□□□□ -1.54
USP46-205ENST00000504078 PDE3BQ13370 1112 aa5.44□□□□□ -1.54
USP46-205ENST00000504078 CTC1Q2NKJ3 1217 aa5.44□□□□□ -1.54
USP46-205ENST00000504078 NBPF8Q3BBV2 869 aa5.44□□□□□ -1.54
USP46-205ENST00000504078 SWT1Q5T5J6 900 aaKnown RBP5.44□□□□□ -1.54
USP46-205ENST00000504078 NBPF14Q5TI25 921 aa5.44□□□□□ -1.54
USP46-205ENST00000504078 FAM196AQ6ZSG2 479 aa5.44□□□□□ -1.54
USP46-205ENST00000504078 NGDNQ8NEJ9 315 aaKnown RBP5.44□□□□□ -1.54
USP46-205ENST00000504078 GMPR2Q9P2T1 348 aaKnown RBP5.44□□□□□ -1.54
USP46-205ENST00000504078 TRAK1Q9UPV9 953 aa5.44□□□□□ -1.54
USP46-205ENST00000504078 COL5A2P05997 1499 aaPredicted RBP5.44□□□□□ -1.54
USP46-205ENST00000504078 DHX57Q6P158 1386 aaKnown RBP5.43□□□□□ -1.54
USP46-205ENST00000504078 SHANK3Q9BYB0 1731 aa5.43□□□□□ -1.54
USP46-205ENST00000504078 OVOS2A0A0G2JMS6 1433 aa5.43□□□□□ -1.54
USP46-205ENST00000504078 OVOS2A0A0J9YW53 1432 aa5.43□□□□□ -1.54
USP46-205ENST00000504078 OVOS2Q6IE36 1432 aa5.43□□□□□ -1.54
USP46-205ENST00000504078 AXIN1O15169 862 aa5.43□□□□□ -1.54
USP46-205ENST00000504078 SMCPP49901 116 aaPredicted RBP5.43□□□□□ -1.54
USP46-205ENST00000504078 PDIA6Q15084 440 aa5.43□□□□□ -1.54
USP46-205ENST00000504078 FHDC1Q9C0D6 1143 aaPredicted RBP5.43□□□□□ -1.54
USP46-205ENST00000504078 PPEF1O14829 653 aaPredicted RBP5.42□□□□□ -1.54
USP46-205ENST00000504078 EVA1CP58658 441 aa5.42□□□□□ -1.54
USP46-205ENST00000504078 C1QTNF8P60827 252 aa5.42□□□□□ -1.54
USP46-205ENST00000504078 BLOC1S3Q6QNY0 202 aa5.42□□□□□ -1.54
USP46-205ENST00000504078 DACH1Q9UI36 760 aa5.42□□□□□ -1.54
USP46-205ENST00000504078 PAPPAQ13219 1627 aa5.41□□□□□ -1.54
USP46-205ENST00000504078 TERTO14746 1132 aaKnown RBP5.41□□□□□ -1.54
USP46-205ENST00000504078 S1PR4O95977 384 aa5.41□□□□□ -1.54
USP46-205ENST00000504078 TCP11L2Q8N4U5 519 aa5.41□□□□□ -1.54
USP46-205ENST00000504078 PKD2L1Q9P0L9 805 aa5.41□□□□□ -1.54
USP46-205ENST00000504078 TUBGCP6Q96RT7 1819 aa5.41□□□□□ -1.54
USP46-205ENST00000504078 EIF3AQ14152 1382 aaKnown RBP5.41□□□□□ -1.54
USP46-205ENST00000504078 CHD4Q14839 1912 aa5.4□□□□□ -1.54
USP46-205ENST00000504078 PIK3C2AO00443 1686 aa5.4□□□□□ -1.54
USP46-205ENST00000504078 NHSQ6T4R5 1651 aa5.4□□□□□ -1.54
USP46-205ENST00000504078 RGPD5Q99666 1765 aa5.4□□□□□ -1.54
USP46-205ENST00000504078 GIGYF1O75420 1035 aaPredicted RBP5.4□□□□□ -1.54
USP46-205ENST00000504078 TTC13Q8NBP0 860 aa5.4□□□□□ -1.54
USP46-205ENST00000504078 C14orf93Q9H972 538 aaKnown RBP5.4□□□□□ -1.54
USP46-205ENST00000504078 CRB1P82279 1406 aa5.4□□□□□ -1.55
USP46-205ENST00000504078 UTRNP46939 3433 aa5.39□□□□□ -1.55
USP46-205ENST00000504078 WASLO00401 505 aaPredicted RBP5.39□□□□□ -1.55
USP46-205ENST00000504078 FOXC1Q12948 553 aa5.39□□□□□ -1.55
USP46-205ENST00000504078 BARGINQ6ZT62 677 aa5.39□□□□□ -1.55
USP46-205ENST00000504078 TOR4AQ9NXH8 423 aa5.39□□□□□ -1.55
USP46-205ENST00000504078 KDM2AQ9Y2K7 1162 aa5.39□□□□□ -1.55
USP46-205ENST00000504078 QRICH2Q9H0J4 1663 aa5.39□□□□□ -1.55
USP46-205ENST00000504078 USP19O94966 1318 aa5.39□□□□□ -1.55
USP46-205ENST00000504078 BTAF1O14981 1849 aa5.39□□□□□ -1.55
USP46-205ENST00000504078 SLIT3O75094 1523 aa5.38□□□□□ -1.55
USP46-205ENST00000504078 ACTN4O43707 911 aaKnown RBP5.38□□□□□ -1.55
USP46-205ENST00000504078 TLL1O43897 1013 aa5.38□□□□□ -1.55
USP46-205ENST00000504078 ADH1BP00325 375 aa5.38□□□□□ -1.55
USP46-205ENST00000504078 RPIAP49247 311 aa5.38□□□□□ -1.55
USP46-205ENST00000504078 ZNF827Q17R98 1081 aa5.38□□□□□ -1.55
USP46-205ENST00000504078 ZNF526Q8TF50 670 aaPredicted RBP5.38□□□□□ -1.55
USP46-205ENST00000504078 NUDT16Q96DE0 195 aaKnown RBP5.38□□□□□ -1.55
USP46-205ENST00000504078 ACSBG1Q96GR2 724 aa5.38□□□□□ -1.55
USP46-205ENST00000504078 MPHOSPH9Q99550 1183 aa5.38□□□□□ -1.55
USP46-205ENST00000504078 SYT17Q9BSW7 474 aa5.38□□□□□ -1.55
USP46-205ENST00000504078 STK32BQ9NY57 414 aa5.38□□□□□ -1.55
USP46-205ENST00000504078 WWC3Q9ULE0 1092 aa5.38□□□□□ -1.55
USP46-205ENST00000504078 ACEP12821 1306 aa5.38□□□□□ -1.55
USP46-205ENST00000504078 TNS2Q63HR2 1409 aa5.38□□□□□ -1.55
USP46-205ENST00000504078 PPIP5K1Q6PFW1 1433 aa5.38□□□□□ -1.55
USP46-205ENST00000504078 COL18A1P39060 1754 aa5.37□□□□□ -1.55
USP46-205ENST00000504078 DDB1Q16531 1140 aa5.37□□□□□ -1.55
USP46-205ENST00000504078 GPR162Q16538 588 aa5.37□□□□□ -1.55
USP46-205ENST00000504078 TXNRD1Q16881 649 aa5.37□□□□□ -1.55
USP46-205ENST00000504078 KMT5BQ4FZB7 885 aa5.37□□□□□ -1.55
USP46-205ENST00000504078 TOM1L2Q6ZVM7 507 aa5.37□□□□□ -1.55
USP46-205ENST00000504078 CYP4X1Q8N118 509 aa5.37□□□□□ -1.55
USP46-205ENST00000504078 ABTB2Q8N961 1025 aa5.37□□□□□ -1.55
USP46-205ENST00000504078 MARCH10Q8NA82 808 aaPredicted RBP5.37□□□□□ -1.55
USP46-205ENST00000504078 NLGN2Q8NFZ4 835 aa5.37□□□□□ -1.55
USP46-205ENST00000504078 SLC6A16Q9GZN6 736 aa5.37□□□□□ -1.55
USP46-205ENST00000504078 CPDO75976 1380 aa5.37□□□□□ -1.55
USP46-205ENST00000504078 CPSF1Q10570 1443 aaKnown RBP5.37□□□□□ -1.55
USP46-205ENST00000504078 DOT1LQ8TEK3 1739 aa5.37□□□□□ -1.55
USP46-205ENST00000504078 CD2BP2O95400 341 aaKnown RBP5.36□□□□□ -1.55
USP46-205ENST00000504078 PRIM1P49642 420 aaKnown RBP5.36□□□□□ -1.55
USP46-205ENST00000504078 KCNQ4P56696 695 aa5.36□□□□□ -1.55
USP46-205ENST00000504078 SUZ12Q15022 739 aaKnown RBP5.36□□□□□ -1.55
USP46-205ENST00000504078 SIRT1Q96EB6 747 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms