RNA–Protein interactions for RNA: ENST00000504047.1

ATXN3-208, Transcript of ataxin 3, humanhuman

TSL 3

Gene ATXN3, Length 426 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-208ENST00000504047 EPHA4P54764 986 aa6.04□□□□□ -1.44
ATXN3-208ENST00000504047 PSMA6P60900 246 aaKnown RBP6.04□□□□□ -1.44
ATXN3-208ENST00000504047 SRPK2P78362 688 aaKnown RBP6.04□□□□□ -1.44
ATXN3-208ENST00000504047 FOXR1Q6PIV2 292 aa6.04□□□□□ -1.44
ATXN3-208ENST00000504047 TREML4Q6UXN2 200 aa6.04□□□□□ -1.44
ATXN3-208ENST00000504047 SV2AQ7L0J3 742 aa6.04□□□□□ -1.44
ATXN3-208ENST00000504047 GAS2L2Q8NHY3 880 aa6.04□□□□□ -1.44
ATXN3-208ENST00000504047 ARXQ96QS3 562 aa6.04□□□□□ -1.44
ATXN3-208ENST00000504047 ARID3AQ99856 593 aa6.04□□□□□ -1.44
ATXN3-208ENST00000504047 ZNF232Q9UNY5 417 aa6.04□□□□□ -1.44
ATXN3-208ENST00000504047 SERTM1A2A2V5 107 aa6.03□□□□□ -1.44
ATXN3-208ENST00000504047 TEAD4Q15561 434 aa6.03□□□□□ -1.44
ATXN3-208ENST00000504047 SWI5Q1ZZU3 235 aa6.03□□□□□ -1.44
ATXN3-208ENST00000504047 TRIM22Q8IYM9 498 aa6.03□□□□□ -1.44
ATXN3-208ENST00000504047 NANOS1Q8WY41 292 aaKnown RBP6.03□□□□□ -1.44
ATXN3-208ENST00000504047 L3MBTL2Q969R5 705 aa6.03□□□□□ -1.44
ATXN3-208ENST00000504047 TSPAN10Q9H1Z9 355 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-208ENST00000504047 ZDHHC3Q9NYG2 299 aa6.03□□□□□ -1.44
ATXN3-208ENST00000504047 PPP1R12BO60237 982 aaPredicted RBP6.02□□□□□ -1.45
ATXN3-208ENST00000504047 MSX1P28360 303 aa6.02□□□□□ -1.45
ATXN3-208ENST00000504047 NOS2P35228 1153 aa6.02□□□□□ -1.45
ATXN3-208ENST00000504047 LBRQ14739 615 aaKnown RBP6.02□□□□□ -1.45
ATXN3-208ENST00000504047 EFHC2Q5JST6 749 aa6.02□□□□□ -1.45
ATXN3-208ENST00000504047 TBCELQ5QJ74 424 aa6.02□□□□□ -1.45
ATXN3-208ENST00000504047 SCG3Q8WXD2 468 aaKnown RBP6.02□□□□□ -1.45
ATXN3-208ENST00000504047 NUCKS1Q9H1E3 243 aaKnown RBP6.02□□□□□ -1.45
ATXN3-208ENST00000504047 GPAMQ9HCL2 828 aa6.02□□□□□ -1.45
ATXN3-208ENST00000504047 USP3Q9Y6I4 520 aa6.02□□□□□ -1.45
ATXN3-208ENST00000504047 ATAD2Q6PL18 1390 aa6.02□□□□□ -1.45
ATXN3-208ENST00000504047 VSIG8P0DPA2 414 aa6.01□□□□□ -1.45
ATXN3-208ENST00000504047 ARSJQ5FYB0 599 aaPredicted RBP6.01□□□□□ -1.45
ATXN3-208ENST00000504047 BICDL1Q6ZP65 573 aa6.01□□□□□ -1.45
ATXN3-208ENST00000504047 VWA5B2Q8N398 1253 aa6.01□□□□□ -1.45
ATXN3-208ENST00000504047 CHMP7Q8WUX9 453 aaPredicted RBP6.01□□□□□ -1.45
ATXN3-208ENST00000504047 TRERF1Q96PN7 1200 aa6.01□□□□□ -1.45
ATXN3-208ENST00000504047 ZMIZ1Q9ULJ6 1067 aa6.01□□□□□ -1.45
ATXN3-208ENST00000504047 PARP3Q9Y6F1 533 aa6.01□□□□□ -1.45
ATXN3-208ENST00000504047 IGFBP4P22692 258 aa6□□□□□ -1.45
ATXN3-208ENST00000504047 ZNF295-AS1Q8N0V1 137 aa6□□□□□ -1.45
ATXN3-208ENST00000504047 STAG2Q8N3U4 1231 aa6□□□□□ -1.45
ATXN3-208ENST00000504047 STK32AQ8WU08 396 aa6□□□□□ -1.45
ATXN3-208ENST00000504047 VTI1AQ96AJ9 217 aa6□□□□□ -1.45
ATXN3-208ENST00000504047 CRISPLD1Q9H336 500 aa6□□□□□ -1.45
ATXN3-208ENST00000504047 RUBCNLQ9H714 662 aa6□□□□□ -1.45
ATXN3-208ENST00000504047 NEUROD4Q9HD90 331 aa6□□□□□ -1.45
ATXN3-208ENST00000504047 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6□□□□□ -1.45
ATXN3-208ENST00000504047 GPC6Q9Y625 555 aaPredicted RBP6□□□□□ -1.45
ATXN3-208ENST00000504047 GJA3Q9Y6H8 435 aa6□□□□□ -1.45
ATXN3-208ENST00000504047 FOXO3O43524 673 aa5.99□□□□□ -1.45
ATXN3-208ENST00000504047 HIRAP54198 1017 aaPredicted RBP5.99□□□□□ -1.45
ATXN3-208ENST00000504047 DBN1Q16643 649 aa5.99□□□□□ -1.45
ATXN3-208ENST00000504047 TMEM164Q5U3C3 297 aa5.99□□□□□ -1.45
ATXN3-208ENST00000504047 FIGNL1Q6PIW4 674 aa5.99□□□□□ -1.45
ATXN3-208ENST00000504047 ZDHHC1Q8WTX9 485 aa5.99□□□□□ -1.45
ATXN3-208ENST00000504047 ZNF837Q96EG3 531 aaPredicted RBP5.99□□□□□ -1.45
ATXN3-208ENST00000504047 CUEDC1Q9NWM3 386 aaPredicted RBP5.99□□□□□ -1.45
ATXN3-208ENST00000504047 PHF24Q9UPV7 400 aa5.99□□□□□ -1.45
ATXN3-208ENST00000504047 ERBB4Q15303 1308 aa5.99□□□□□ -1.45
ATXN3-208ENST00000504047 EML1O00423 815 aa5.98□□□□□ -1.45
ATXN3-208ENST00000504047 C21orf2O43822 256 aa5.98□□□□□ -1.45
ATXN3-208ENST00000504047 ATP4AP20648 1035 aa5.98□□□□□ -1.45
ATXN3-208ENST00000504047 WEE1P30291 646 aa5.98□□□□□ -1.45
ATXN3-208ENST00000504047 TXLNAP40222 546 aa5.98□□□□□ -1.45
ATXN3-208ENST00000504047 HIF1AQ16665 826 aa5.98□□□□□ -1.45
ATXN3-208ENST00000504047 C1orf53Q5VUE5 145 aa5.98□□□□□ -1.45
ATXN3-208ENST00000504047 NLRP8Q86W28 1048 aa5.98□□□□□ -1.45
ATXN3-208ENST00000504047 RHPN1Q8TCX5 695 aa5.98□□□□□ -1.45
ATXN3-208ENST00000504047 C2orf49Q9BVC5 232 aaPredicted RBP5.98□□□□□ -1.45
ATXN3-208ENST00000504047 HCN4Q9Y3Q4 1203 aa5.98□□□□□ -1.45
ATXN3-208ENST00000504047 A0A1W2PNR3 127 aa5.97□□□□□ -1.45
ATXN3-208ENST00000504047 LGR5O75473 907 aa5.97□□□□□ -1.45
ATXN3-208ENST00000504047 GMPRP36959 345 aa5.97□□□□□ -1.45
ATXN3-208ENST00000504047 LCE2AQ5TA79 106 aaPredicted RBP5.97□□□□□ -1.45
ATXN3-208ENST00000504047 POTEAQ6S8J7 498 aa5.97□□□□□ -1.45
ATXN3-208ENST00000504047 GTPBP3Q969Y2 492 aaKnown RBP5.97□□□□□ -1.45
ATXN3-208ENST00000504047 PHACTR1Q9C0D0 580 aa5.97□□□□□ -1.45
ATXN3-208ENST00000504047 PRMT3O60678 531 aa5.96□□□□□ -1.46
ATXN3-208ENST00000504047 PDE4CQ08493 712 aa5.96□□□□□ -1.46
ATXN3-208ENST00000504047 SH3PXD2AQ5TCZ1 1133 aa5.96□□□□□ -1.46
ATXN3-208ENST00000504047 ALDH16A1Q8IZ83 802 aa5.96□□□□□ -1.46
ATXN3-208ENST00000504047 CLP1Q92989 425 aaKnown RBP5.96□□□□□ -1.46
ATXN3-208ENST00000504047 NGLY1Q96IV0 654 aa5.96□□□□□ -1.46
ATXN3-208ENST00000504047 ZIC5Q96T25 663 aa5.96□□□□□ -1.46
ATXN3-208ENST00000504047 CFHR5Q9BXR6 569 aa5.96□□□□□ -1.46
ATXN3-208ENST00000504047 ANKIB1Q9P2G1 1089 aa5.96□□□□□ -1.46
ATXN3-208ENST00000504047 NSFL1CQ9UNZ2 370 aaKnown RBP5.96□□□□□ -1.46
ATXN3-208ENST00000504047 GPR25O00155 361 aa5.95□□□□□ -1.46
ATXN3-208ENST00000504047 WIPF1O43516 503 aa5.95□□□□□ -1.46
ATXN3-208ENST00000504047 FAM69CQ0P6D2 419 aa5.95□□□□□ -1.46
ATXN3-208ENST00000504047 GPR161Q8N6U8 529 aaKnown RBP5.95□□□□□ -1.46
ATXN3-208ENST00000504047 PRIMPOLQ96LW4 560 aa5.95□□□□□ -1.46
ATXN3-208ENST00000504047 COL25A1Q9BXS0 654 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-208ENST00000504047 ATXN7L1Q9ULK2 861 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-208ENST00000504047 PCDHGC4Q9Y5F7 938 aa5.95□□□□□ -1.46
ATXN3-208ENST00000504047 ATXN7O15265 892 aaPredicted RBP5.94□□□□□ -1.46
ATXN3-208ENST00000504047 INSM1Q01101 510 aaPredicted RBP5.94□□□□□ -1.46
ATXN3-208ENST00000504047 RTN1Q16799 776 aa5.94□□□□□ -1.46
ATXN3-208ENST00000504047 CNTNAP3BQ96NU0 1288 aa5.94□□□□□ -1.46
ATXN3-208ENST00000504047 CNTNAP3Q9BZ76 1288 aa5.94□□□□□ -1.46
ATXN3-208ENST00000504047 ZCCHC2Q9C0B9 1178 aaKnown RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms