RNA–Protein interactions for RNA: ENST00000503856.5

PDGFRA-203, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 3

Gene PDGFRA, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-203ENST00000503856 STARD3NLO95772 234 aa27.14■■□□□ 1.94
PDGFRA-203ENST00000503856 POLD1P28340 1107 aa27.14■■□□□ 1.94
PDGFRA-203ENST00000503856 ARXQ96QS3 562 aa27.14■■□□□ 1.94
PDGFRA-203ENST00000503856 TEX13AQ9BXU3 409 aaPredicted RBP27.14■■□□□ 1.94
PDGFRA-203ENST00000503856 TRIM35Q9UPQ4 493 aa27.14■■□□□ 1.94
PDGFRA-203ENST00000503856 APAF1O14727 1248 aa27.13■■□□□ 1.93
PDGFRA-203ENST00000503856 ZBTB1Q9Y2K1 713 aa27.13■■□□□ 1.93
PDGFRA-203ENST00000503856 RFC4P35249 363 aa27.11■■□□□ 1.93
PDGFRA-203ENST00000503856 PRAMEF22A3QJZ6 481 aa27.1■■□□□ 1.93
PDGFRA-203ENST00000503856 USP16Q9Y5T5 823 aa27.1■■□□□ 1.93
PDGFRA-203ENST00000503856 SOS1Q07889 1333 aaPredicted RBP27.1■■□□□ 1.93
PDGFRA-203ENST00000503856 SNRPA1P09661 255 aaKnown RBP27.09■■□□□ 1.93
PDGFRA-203ENST00000503856 CANXP27824 592 aaKnown RBP27.09■■□□□ 1.93
PDGFRA-203ENST00000503856 FHDC1Q9C0D6 1143 aaPredicted RBP27.08■■□□□ 1.93
PDGFRA-203ENST00000503856 A1BGP04217 495 aa27.07■■□□□ 1.92
PDGFRA-203ENST00000503856 EIF4A1P60842 406 aaKnown RBP27.07■■□□□ 1.92
PDGFRA-203ENST00000503856 SRP68Q9UHB9 627 aaKnown RBP27.06■■□□□ 1.92
PDGFRA-203ENST00000503856 TSPYL4Q9UJ04 414 aa27.06■■□□□ 1.92
PDGFRA-203ENST00000503856 LAMB4A4D0S4 1761 aa27.05■■□□□ 1.92
PDGFRA-203ENST00000503856 GYS1P13807 737 aa27.05■■□□□ 1.92
PDGFRA-203ENST00000503856 COL15A1P39059 1388 aa27.05■■□□□ 1.92
PDGFRA-203ENST00000503856 SYT17Q9BSW7 474 aa27.04■■□□□ 1.92
PDGFRA-203ENST00000503856 USP42Q9H9J4 1324 aaKnown RBP27.04■■□□□ 1.92
PDGFRA-203ENST00000503856 EIF5P55010 431 aaKnown RBP27.03■■□□□ 1.92
PDGFRA-203ENST00000503856 NLGN1Q8N2Q7 840 aa27.03■■□□□ 1.92
PDGFRA-203ENST00000503856 BABAM1Q9NWV8 329 aa27.03■■□□□ 1.92
PDGFRA-203ENST00000503856 SENP3-EIF4A1A0A087X0R7 540 aa27.02■■□□□ 1.92
PDGFRA-203ENST00000503856 GIGYF1O75420 1035 aaPredicted RBP27.02■■□□□ 1.92
PDGFRA-203ENST00000503856 KLHL34Q8N239 644 aa27.02■■□□□ 1.92
PDGFRA-203ENST00000503856 LAS1LQ9Y4W2 734 aaKnown RBP27.02■■□□□ 1.92
PDGFRA-203ENST00000503856 ZPR1O75312 459 aa27.01■■□□□ 1.91
PDGFRA-203ENST00000503856 PIP4K2AP48426 406 aaPredicted RBP27.01■■□□□ 1.91
PDGFRA-203ENST00000503856 FAM9BQ8IZU0 186 aa27.01■■□□□ 1.91
PDGFRA-203ENST00000503856 CHL1O00533 1208 aa27■■□□□ 1.91
PDGFRA-203ENST00000503856 MMP10P09238 476 aa27■■□□□ 1.91
PDGFRA-203ENST00000503856 IL6STP40189 918 aaPredicted RBP27■■□□□ 1.91
PDGFRA-203ENST00000503856 ZNF330Q9Y3S2 320 aaPredicted RBP27■■□□□ 1.91
PDGFRA-203ENST00000503856 FKBP8Q14318 412 aa26.99■■□□□ 1.91
PDGFRA-203ENST00000503856 USPL1Q5W0Q7 1092 aa26.99■■□□□ 1.91
PDGFRA-203ENST00000503856 NARFQ9UHQ1 456 aa26.99■■□□□ 1.91
PDGFRA-203ENST00000503856 A0A087WZG4 1122 aa26.97■■□□□ 1.91
PDGFRA-203ENST00000503856 NBPF26B4DH59 902 aa26.96■■□□□ 1.91
PDGFRA-203ENST00000503856 NBPF10Q6P3W6 841 aaKnown RBP26.96■■□□□ 1.91
PDGFRA-203ENST00000503856 NBPF15Q8N660 670 aa26.96■■□□□ 1.91
PDGFRA-203ENST00000503856 CFAP44Q96MT7 982 aa26.96■■□□□ 1.91
PDGFRA-203ENST00000503856 NPM2Q86SE8 214 aaKnown RBP26.95■■□□□ 1.9
PDGFRA-203ENST00000503856 TBC1D2BQ9UPU7 963 aa26.95■■□□□ 1.9
PDGFRA-203ENST00000503856 BCL2L12Q9HB09 334 aa26.94■■□□□ 1.9
PDGFRA-203ENST00000503856 ZNF853P0CG23 659 aa26.93■■□□□ 1.9
PDGFRA-203ENST00000503856 CALD1Q05682 793 aaKnown RBP26.93■■□□□ 1.9
PDGFRA-203ENST00000503856 SCN7AQ01118 1682 aa26.92■■□□□ 1.9
PDGFRA-203ENST00000503856 CCDC27Q2M243 656 aa26.92■■□□□ 1.9
PDGFRA-203ENST00000503856 KRT24Q2M2I5 525 aa26.92■■□□□ 1.9
PDGFRA-203ENST00000503856 NLGN2Q8NFZ4 835 aa26.92■■□□□ 1.9
PDGFRA-203ENST00000503856 PARP3Q9Y6F1 533 aa26.92■■□□□ 1.9
PDGFRA-203ENST00000503856 AFDNP55196 1824 aaKnown RBP26.91■■□□□ 1.9
PDGFRA-203ENST00000503856 TM4SF1P30408 202 aa26.91■■□□□ 1.9
PDGFRA-203ENST00000503856 MBIPQ9NS73 344 aa26.91■■□□□ 1.9
PDGFRA-203ENST00000503856 IFT57Q9NWB7 429 aa26.91■■□□□ 1.9
PDGFRA-203ENST00000503856 CD2APQ9Y5K6 639 aa26.91■■□□□ 1.9
PDGFRA-203ENST00000503856 BCORQ6W2J9 1755 aa26.91■■□□□ 1.9
PDGFRA-203ENST00000503856 KIF13BQ9NQT8 1826 aa26.9■■□□□ 1.9
PDGFRA-203ENST00000503856 GNAI1P63096 354 aa26.9■■□□□ 1.9
PDGFRA-203ENST00000503856 DDR1Q08345 913 aa26.9■■□□□ 1.9
PDGFRA-203ENST00000503856 DIEXFQ68CQ4 756 aaKnown RBP26.9■■□□□ 1.9
PDGFRA-203ENST00000503856 DZIP3Q86Y13 1208 aaKnown RBP26.9■■□□□ 1.9
PDGFRA-203ENST00000503856 WWC1Q8IX03 1113 aa26.9■■□□□ 1.9
PDGFRA-203ENST00000503856 EIF2S2P20042 333 aaKnown RBP26.89■■□□□ 1.9
PDGFRA-203ENST00000503856 SALL2Q9Y467 1007 aaPredicted RBP26.89■■□□□ 1.9
PDGFRA-203ENST00000503856 CAMTA2O94983 1202 aa26.88■■□□□ 1.89
PDGFRA-203ENST00000503856 NFIXQ14938 502 aa26.88■■□□□ 1.89
PDGFRA-203ENST00000503856 NCBP3Q53F19 620 aaKnown RBP26.88■■□□□ 1.89
PDGFRA-203ENST00000503856 CCER2I3L3R5 266 aa26.86■■□□□ 1.89
PDGFRA-203ENST00000503856 POLRMTO00411 1230 aaKnown RBP26.86■■□□□ 1.89
PDGFRA-203ENST00000503856 NGEFQ8N5V2 710 aa26.86■■□□□ 1.89
PDGFRA-203ENST00000503856 MYL6BP14649 208 aa26.85■■□□□ 1.89
PDGFRA-203ENST00000503856 BICDL1Q6ZP65 573 aa26.85■■□□□ 1.89
PDGFRA-203ENST00000503856 NECTIN2Q92692 538 aa26.85■■□□□ 1.89
PDGFRA-203ENST00000503856 ERBB4Q15303 1308 aa26.85■■□□□ 1.89
PDGFRA-203ENST00000503856 N4BP2Q86UW6 1770 aaPredicted RBP26.84■■□□□ 1.89
PDGFRA-203ENST00000503856 NUP98P52948 1817 aa26.84■■□□□ 1.89
PDGFRA-203ENST00000503856 DCAF8L1A6NGE4 600 aa26.84■■□□□ 1.89
PDGFRA-203ENST00000503856 TBC1D9BQ66K14 1250 aa26.84■■□□□ 1.89
PDGFRA-203ENST00000503856 NRXN2Q9P2S2 1712 aa26.83■■□□□ 1.89
PDGFRA-203ENST00000503856 C10orf71Q711Q0 1435 aa26.82■■□□□ 1.88
PDGFRA-203ENST00000503856 PDIA6Q15084 440 aa26.82■■□□□ 1.88
PDGFRA-203ENST00000503856 DUSP27Q5VZP5 1158 aa26.82■■□□□ 1.88
PDGFRA-203ENST00000503856 KIAA1551Q9HCM1 1747 aa26.82■■□□□ 1.88
PDGFRA-203ENST00000503856 ANXA1P04083 346 aa26.81■■□□□ 1.88
PDGFRA-203ENST00000503856 SERPINB2P05120 415 aa26.8■■□□□ 1.88
PDGFRA-203ENST00000503856 HOXB7P09629 217 aa26.8■■□□□ 1.88
PDGFRA-203ENST00000503856 PROSER3Q2NL68 480 aa26.8■■□□□ 1.88
PDGFRA-203ENST00000503856 TTLL7Q6ZT98 887 aa26.8■■□□□ 1.88
PDGFRA-203ENST00000503856 CLEC4GQ6UXB4 293 aa26.79■■□□□ 1.88
PDGFRA-203ENST00000503856 LRP10Q7Z4F1 713 aa26.79■■□□□ 1.88
PDGFRA-203ENST00000503856 TSR2Q969E8 191 aaKnown RBP26.79■■□□□ 1.88
PDGFRA-203ENST00000503856 IL16Q14005 1332 aa26.79■■□□□ 1.88
PDGFRA-203ENST00000503856 ELL2O00472 640 aaPredicted RBP26.78■■□□□ 1.88
PDGFRA-203ENST00000503856 HDGFL1Q5TGJ6 251 aa26.78■■□□□ 1.88
PDGFRA-203ENST00000503856 PELP1Q8IZL8 1130 aaKnown RBP26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms