RNA–Protein interactions for RNA: ENST00000503838.1

TMEM173-205, Transcript of transmembrane protein 173, humanhuman

TSL 5

Gene TMEM173, Length 595 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM173-205ENST00000503838 SENP3-EIF4A1A0A087X0R7 540 aa20.38■□□□□ 0.85
TMEM173-205ENST00000503838 SRP68Q9UHB9 627 aaKnown RBP20.38■□□□□ 0.85
TMEM173-205ENST00000503838 PRAMEF22A3QJZ6 481 aa20.37■□□□□ 0.85
TMEM173-205ENST00000503838 CANXP27824 592 aaKnown RBP20.37■□□□□ 0.85
TMEM173-205ENST00000503838 RFC4P35249 363 aa20.37■□□□□ 0.85
TMEM173-205ENST00000503838 TAF7Q15545 349 aaPredicted RBP20.37■□□□□ 0.85
TMEM173-205ENST00000503838 VSIG10Q8N0Z9 540 aa20.37■□□□□ 0.85
TMEM173-205ENST00000503838 ZNF330Q9Y3S2 320 aaPredicted RBP20.37■□□□□ 0.85
TMEM173-205ENST00000503838 DCAF8L1A6NGE4 600 aa20.36■□□□□ 0.85
TMEM173-205ENST00000503838 MRS2Q9HD23 443 aa20.36■□□□□ 0.85
TMEM173-205ENST00000503838 COL15A1P39059 1388 aa20.35■□□□□ 0.85
TMEM173-205ENST00000503838 SOS1Q07889 1333 aaPredicted RBP20.35■□□□□ 0.85
TMEM173-205ENST00000503838 ADRA2BP18089 450 aa20.35■□□□□ 0.85
TMEM173-205ENST00000503838 PIP4K2AP48426 406 aaPredicted RBP20.35■□□□□ 0.85
TMEM173-205ENST00000503838 SYT17Q9BSW7 474 aa20.35■□□□□ 0.85
TMEM173-205ENST00000503838 SCN7AQ01118 1682 aa20.35■□□□□ 0.85
TMEM173-205ENST00000503838 STARD3NLO95772 234 aa20.34■□□□□ 0.85
TMEM173-205ENST00000503838 BCORQ6W2J9 1755 aa20.33■□□□□ 0.84
TMEM173-205ENST00000503838 USP42Q9H9J4 1324 aaKnown RBP20.32■□□□□ 0.84
TMEM173-205ENST00000503838 MMP10P09238 476 aa20.32■□□□□ 0.84
TMEM173-205ENST00000503838 GYS1P13807 737 aa20.32■□□□□ 0.84
TMEM173-205ENST00000503838 LMOD3Q0VAK6 560 aa20.32■□□□□ 0.84
TMEM173-205ENST00000503838 NLGN2Q8NFZ4 835 aa20.32■□□□□ 0.84
TMEM173-205ENST00000503838 AFDNP55196 1824 aaKnown RBP20.32■□□□□ 0.84
TMEM173-205ENST00000503838 N4BP2Q86UW6 1770 aaPredicted RBP20.31■□□□□ 0.84
TMEM173-205ENST00000503838 A1BGP04217 495 aa20.31■□□□□ 0.84
TMEM173-205ENST00000503838 USP16Q9Y5T5 823 aa20.31■□□□□ 0.84
TMEM173-205ENST00000503838 APAF1O14727 1248 aa20.3■□□□□ 0.84
TMEM173-205ENST00000503838 SNRPA1P09661 255 aaKnown RBP20.3■□□□□ 0.84
TMEM173-205ENST00000503838 USPL1Q5W0Q7 1092 aa20.3■□□□□ 0.84
TMEM173-205ENST00000503838 TEX13AQ9BXU3 409 aaPredicted RBP20.3■□□□□ 0.84
TMEM173-205ENST00000503838 TSPYL4Q9UJ04 414 aa20.3■□□□□ 0.84
TMEM173-205ENST00000503838 TRIM35Q9UPQ4 493 aa20.3■□□□□ 0.84
TMEM173-205ENST00000503838 LAS1LQ9Y4W2 734 aaKnown RBP20.3■□□□□ 0.84
TMEM173-205ENST00000503838 KIF13BQ9NQT8 1826 aa20.3■□□□□ 0.84
TMEM173-205ENST00000503838 ZPR1O75312 459 aa20.29■□□□□ 0.84
TMEM173-205ENST00000503838 FKBP8Q14318 412 aa20.29■□□□□ 0.84
TMEM173-205ENST00000503838 PELP1Q8IZL8 1130 aaKnown RBP20.29■□□□□ 0.84
TMEM173-205ENST00000503838 PNISRQ8TF01 805 aaKnown RBP20.29■□□□□ 0.84
TMEM173-205ENST00000503838 WWC3Q9ULE0 1092 aa20.28■□□□□ 0.84
TMEM173-205ENST00000503838 EIF4A1P60842 406 aaKnown RBP20.27■□□□□ 0.84
TMEM173-205ENST00000503838 NLGN1Q8N2Q7 840 aa20.27■□□□□ 0.84
TMEM173-205ENST00000503838 KIAA1551Q9HCM1 1747 aa20.27■□□□□ 0.83
TMEM173-205ENST00000503838 EIF5P55010 431 aaKnown RBP20.26■□□□□ 0.83
TMEM173-205ENST00000503838 TBC1D2BQ9UPU7 963 aa20.26■□□□□ 0.83
TMEM173-205ENST00000503838 NARFQ9UHQ1 456 aa20.25■□□□□ 0.83
TMEM173-205ENST00000503838 DDR1Q08345 913 aa20.24■□□□□ 0.83
TMEM173-205ENST00000503838 NPM2Q86SE8 214 aaKnown RBP20.24■□□□□ 0.83
TMEM173-205ENST00000503838 PARP3Q9Y6F1 533 aa20.24■□□□□ 0.83
TMEM173-205ENST00000503838 NBPF26B4DH59 902 aa20.23■□□□□ 0.83
TMEM173-205ENST00000503838 GIGYF1O75420 1035 aaPredicted RBP20.23■□□□□ 0.83
TMEM173-205ENST00000503838 IL6STP40189 918 aaPredicted RBP20.23■□□□□ 0.83
TMEM173-205ENST00000503838 NBPF10Q6P3W6 841 aaKnown RBP20.23■□□□□ 0.83
TMEM173-205ENST00000503838 BICDL1Q6ZP65 573 aa20.23■□□□□ 0.83
TMEM173-205ENST00000503838 NBPF15Q8N660 670 aa20.23■□□□□ 0.83
TMEM173-205ENST00000503838 BCL2L12Q9HB09 334 aa20.23■□□□□ 0.83
TMEM173-205ENST00000503838 CHD4Q14839 1912 aa20.22■□□□□ 0.83
TMEM173-205ENST00000503838 C10orf71Q711Q0 1435 aa20.22■□□□□ 0.83
TMEM173-205ENST00000503838 A0A087WZG4 1122 aa20.22■□□□□ 0.83
TMEM173-205ENST00000503838 KRT24Q2M2I5 525 aa20.22■□□□□ 0.83
TMEM173-205ENST00000503838 FAM9BQ8IZU0 186 aa20.22■□□□□ 0.83
TMEM173-205ENST00000503838 NGEFQ8N5V2 710 aa20.22■□□□□ 0.83
TMEM173-205ENST00000503838 NUP98P52948 1817 aa20.21■□□□□ 0.83
TMEM173-205ENST00000503838 DZIP3Q86Y13 1208 aaKnown RBP20.21■□□□□ 0.83
TMEM173-205ENST00000503838 NECTIN2Q92692 538 aa20.21■□□□□ 0.83
TMEM173-205ENST00000503838 CD2APQ9Y5K6 639 aa20.21■□□□□ 0.83
TMEM173-205ENST00000503838 NRXN2Q9P2S2 1712 aa20.21■□□□□ 0.83
TMEM173-205ENST00000503838 BRCA1P38398 1863 aaKnown RBP20.2■□□□□ 0.82
TMEM173-205ENST00000503838 NFIXQ14938 502 aa20.2■□□□□ 0.82
TMEM173-205ENST00000503838 GPR162Q16538 588 aa20.2■□□□□ 0.82
TMEM173-205ENST00000503838 MYL6BP14649 208 aa20.19■□□□□ 0.82
TMEM173-205ENST00000503838 EIF2S2P20042 333 aaKnown RBP20.19■□□□□ 0.82
TMEM173-205ENST00000503838 SALL2Q9Y467 1007 aaPredicted RBP20.19■□□□□ 0.82
TMEM173-205ENST00000503838 PXDNLA1KZ92 1463 aa20.18■□□□□ 0.82
TMEM173-205ENST00000503838 ANKRD31Q8N7Z5 1873 aa20.18■□□□□ 0.82
TMEM173-205ENST00000503838 POLRMTO00411 1230 aaKnown RBP20.18■□□□□ 0.82
TMEM173-205ENST00000503838 CAMTA2O94983 1202 aa20.18■□□□□ 0.82
TMEM173-205ENST00000503838 TBC1D9BQ66K14 1250 aa20.18■□□□□ 0.82
TMEM173-205ENST00000503838 CHL1O00533 1208 aa20.17■□□□□ 0.82
TMEM173-205ENST00000503838 MBIPQ9NS73 344 aa20.17■□□□□ 0.82
TMEM173-205ENST00000503838 CACNA1SQ13698 1873 aa20.17■□□□□ 0.82
TMEM173-205ENST00000503838 ANXA1P04083 346 aa20.16■□□□□ 0.82
TMEM173-205ENST00000503838 YBX3P16989 372 aaKnown RBP eCLIP20.16■□□□□ 0.82
TMEM173-205ENST00000503838 TM4SF1P30408 202 aa20.16■□□□□ 0.82
TMEM173-205ENST00000503838 BABAM1Q9NWV8 329 aa20.16■□□□□ 0.82
TMEM173-205ENST00000503838 CFAP44Q96MT7 982 aa20.15■□□□□ 0.82
TMEM173-205ENST00000503838 CARMIL3Q8ND23 1372 aa20.15■□□□□ 0.82
TMEM173-205ENST00000503838 DLEC1Q9Y238 1755 aa20.15■□□□□ 0.82
TMEM173-205ENST00000503838 COL11A2P13942 1736 aaPredicted RBP20.14■□□□□ 0.81
TMEM173-205ENST00000503838 A0A0G2JLW4 131 aa20.14■□□□□ 0.81
TMEM173-205ENST00000503838 YY1P25490 414 aa20.14■□□□□ 0.81
TMEM173-205ENST00000503838 CCDC24Q8N4L8 307 aa20.14■□□□□ 0.81
TMEM173-205ENST00000503838 SERPINB2P05120 415 aa20.13■□□□□ 0.81
TMEM173-205ENST00000503838 PROSER3Q2NL68 480 aa20.13■□□□□ 0.81
TMEM173-205ENST00000503838 IFT57Q9NWB7 429 aa20.13■□□□□ 0.81
TMEM173-205ENST00000503838 ANKRD36CQ5JPF3 1778 aa20.13■□□□□ 0.81
TMEM173-205ENST00000503838 DPEP1P16444 411 aa20.12■□□□□ 0.81
TMEM173-205ENST00000503838 GNAI1P63096 354 aa20.12■□□□□ 0.81
TMEM173-205ENST00000503838 CALD1Q05682 793 aaKnown RBP20.12■□□□□ 0.81
TMEM173-205ENST00000503838 TTLL7Q6ZT98 887 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms