RNA–Protein interactions for RNA: ENST00000503324.1

SMAD1-204, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-204ENST00000503324 LRP5O75197 1615 aa23.21■■□□□ 1.31
SMAD1-204ENST00000503324 STARD3NLO95772 234 aa23.2■■□□□ 1.3
SMAD1-204ENST00000503324 ZNF853P0CG23 659 aa23.2■■□□□ 1.3
SMAD1-204ENST00000503324 WWC1Q8IX03 1113 aa23.2■■□□□ 1.3
SMAD1-204ENST00000503324 CFAP44Q96MT7 982 aa23.2■■□□□ 1.3
SMAD1-204ENST00000503324 ZBTB1Q9Y2K1 713 aa23.2■■□□□ 1.3
SMAD1-204ENST00000503324 USP16Q9Y5T5 823 aa23.2■■□□□ 1.3
SMAD1-204ENST00000503324 SRCAPQ6ZRS2 3230 aa23.2■■□□□ 1.3
SMAD1-204ENST00000503324 SLC16A10Q8TF71 515 aa23.19■■□□□ 1.3
SMAD1-204ENST00000503324 MTFR1LQ9H019 292 aa23.19■■□□□ 1.3
SMAD1-204ENST00000503324 GIGYF1O75420 1035 aaPredicted RBP23.18■■□□□ 1.3
SMAD1-204ENST00000503324 ADRA2BP18089 450 aa23.18■■□□□ 1.3
SMAD1-204ENST00000503324 LAS1LQ9Y4W2 734 aaKnown RBP23.18■■□□□ 1.3
SMAD1-204ENST00000503324 SOS1Q07889 1333 aaPredicted RBP23.17■■□□□ 1.3
SMAD1-204ENST00000503324 CALD1Q05682 793 aaKnown RBP23.17■■□□□ 1.3
SMAD1-204ENST00000503324 ARHGEF1Q92888 912 aaKnown RBP23.17■■□□□ 1.3
SMAD1-204ENST00000503324 SPON1Q9HCB6 807 aa23.17■■□□□ 1.3
SMAD1-204ENST00000503324 IFT57Q9NWB7 429 aa23.17■■□□□ 1.3
SMAD1-204ENST00000503324 ATF5Q9Y2D1 282 aaPredicted RBP23.17■■□□□ 1.3
SMAD1-204ENST00000503324 COL24A1Q17RW2 1714 aa23.16■■□□□ 1.3
SMAD1-204ENST00000503324 MSH5O43196 834 aa23.16■■□□□ 1.3
SMAD1-204ENST00000503324 TRAPPC3LQ5T215 181 aa23.16■■□□□ 1.3
SMAD1-204ENST00000503324 SGIP1Q9BQI5 828 aa23.16■■□□□ 1.3
SMAD1-204ENST00000503324 LAMB4A4D0S4 1761 aa23.16■■□□□ 1.3
SMAD1-204ENST00000503324 A1BGP04217 495 aa23.15■■□□□ 1.3
SMAD1-204ENST00000503324 PTGER2P43116 358 aa23.15■■□□□ 1.3
SMAD1-204ENST00000503324 MBIPQ9NS73 344 aa23.15■■□□□ 1.3
SMAD1-204ENST00000503324 SALL2Q9Y467 1007 aaPredicted RBP23.15■■□□□ 1.3
SMAD1-204ENST00000503324 C4AP0C0L4 1744 aa23.15■■□□□ 1.3
SMAD1-204ENST00000503324 CANXP27824 592 aaKnown RBP23.14■■□□□ 1.29
SMAD1-204ENST00000503324 GNAI1P63096 354 aa23.14■■□□□ 1.29
SMAD1-204ENST00000503324 NGEFQ8N5V2 710 aa23.13■■□□□ 1.29
SMAD1-204ENST00000503324 EIF5P55010 431 aaKnown RBP23.12■■□□□ 1.29
SMAD1-204ENST00000503324 KRT24Q2M2I5 525 aa23.12■■□□□ 1.29
SMAD1-204ENST00000503324 COL15A1P39059 1388 aa23.12■■□□□ 1.29
SMAD1-204ENST00000503324 IL16Q14005 1332 aa23.11■■□□□ 1.29
SMAD1-204ENST00000503324 ZNF521Q96K83 1311 aa23.1■■□□□ 1.29
SMAD1-204ENST00000503324 NBPF26B4DH59 902 aa23.1■■□□□ 1.29
SMAD1-204ENST00000503324 RFC4P35249 363 aa23.1■■□□□ 1.29
SMAD1-204ENST00000503324 IL6STP40189 918 aaPredicted RBP23.1■■□□□ 1.29
SMAD1-204ENST00000503324 PIP4K2AP48426 406 aaPredicted RBP23.1■■□□□ 1.29
SMAD1-204ENST00000503324 MSL1Q68DK7 614 aa23.1■■□□□ 1.29
SMAD1-204ENST00000503324 NBPF10Q6P3W6 841 aaKnown RBP23.1■■□□□ 1.29
SMAD1-204ENST00000503324 WDR63Q8IWG1 891 aa23.1■■□□□ 1.29
SMAD1-204ENST00000503324 NBPF15Q8N660 670 aa23.1■■□□□ 1.29
SMAD1-204ENST00000503324 USP42Q9H9J4 1324 aaKnown RBP23.09■■□□□ 1.29
SMAD1-204ENST00000503324 SRP68Q9UHB9 627 aaKnown RBP23.09■■□□□ 1.29
SMAD1-204ENST00000503324 GYS1P13807 737 aa23.08■■□□□ 1.29
SMAD1-204ENST00000503324 TSR2Q969E8 191 aaKnown RBP23.07■■□□□ 1.28
SMAD1-204ENST00000503324 NARFQ9UHQ1 456 aa23.06■■□□□ 1.28
SMAD1-204ENST00000503324 HOXB7P09629 217 aa23.05■■□□□ 1.28
SMAD1-204ENST00000503324 SPINK5Q9NQ38 1064 aaPredicted RBP23.05■■□□□ 1.28
SMAD1-204ENST00000503324 A0A087WZG4 1122 aa23.04■■□□□ 1.28
SMAD1-204ENST00000503324 EIF2S2P20042 333 aaKnown RBP23.04■■□□□ 1.28
SMAD1-204ENST00000503324 DUSP27Q5VZP5 1158 aa23.04■■□□□ 1.28
SMAD1-204ENST00000503324 USPL1Q5W0Q7 1092 aa23.04■■□□□ 1.28
SMAD1-204ENST00000503324 ZNF330Q9Y3S2 320 aaPredicted RBP23.04■■□□□ 1.28
SMAD1-204ENST00000503324 ERBB4Q15303 1308 aa23.04■■□□□ 1.28
SMAD1-204ENST00000503324 POLD1P28340 1107 aa23.03■■□□□ 1.28
SMAD1-204ENST00000503324 FKBP8Q14318 412 aa23.03■■□□□ 1.28
SMAD1-204ENST00000503324 PDIA6Q15084 440 aa23.03■■□□□ 1.28
SMAD1-204ENST00000503324 C8orf58Q8NAV2 365 aa23.03■■□□□ 1.28
SMAD1-204ENST00000503324 BCL2L12Q9HB09 334 aa23.03■■□□□ 1.28
SMAD1-204ENST00000503324 ZPR1O75312 459 aa23.02■■□□□ 1.28
SMAD1-204ENST00000503324 LRP10Q7Z4F1 713 aa23.02■■□□□ 1.28
SMAD1-204ENST00000503324 NLGN1Q8N2Q7 840 aa23.02■■□□□ 1.28
SMAD1-204ENST00000503324 ARXQ96QS3 562 aa23.02■■□□□ 1.28
SMAD1-204ENST00000503324 TBC1D2BQ9UPU7 963 aa23.02■■□□□ 1.28
SMAD1-204ENST00000503324 SCN7AQ01118 1682 aa23.02■■□□□ 1.28
SMAD1-204ENST00000503324 FANCIQ9NVI1 1328 aa23.02■■□□□ 1.28
SMAD1-204ENST00000503324 NECTIN2Q92692 538 aa23.01■■□□□ 1.27
SMAD1-204ENST00000503324 PPP1R1BQ9UD71 204 aaPredicted RBP23.01■■□□□ 1.27
SMAD1-204ENST00000503324 CAMTA2O94983 1202 aa23■■□□□ 1.27
SMAD1-204ENST00000503324 PROSER3Q2NL68 480 aa23■■□□□ 1.27
SMAD1-204ENST00000503324 DZIP3Q86Y13 1208 aaKnown RBP23■■□□□ 1.27
SMAD1-204ENST00000503324 TSPYL6Q8N831 410 aa23■■□□□ 1.27
SMAD1-204ENST00000503324 BCORQ6W2J9 1755 aa22.99■■□□□ 1.27
SMAD1-204ENST00000503324 ELL2O00472 640 aaPredicted RBP22.99■■□□□ 1.27
SMAD1-204ENST00000503324 MMP10P09238 476 aa22.99■■□□□ 1.27
SMAD1-204ENST00000503324 MYL6BP14649 208 aa22.99■■□□□ 1.27
SMAD1-204ENST00000503324 HDGFL1Q5TGJ6 251 aa22.99■■□□□ 1.27
SMAD1-204ENST00000503324 NPM2Q86SE8 214 aaKnown RBP22.98■■□□□ 1.27
SMAD1-204ENST00000503324 ANXA1P04083 346 aa22.97■■□□□ 1.27
SMAD1-204ENST00000503324 TM4SF1P30408 202 aa22.97■■□□□ 1.27
SMAD1-204ENST00000503324 DDX21Q9NR30 783 aaKnown RBP eCLIP22.97■■□□□ 1.27
SMAD1-204ENST00000503324 DDR1Q08345 913 aa22.96■■□□□ 1.27
SMAD1-204ENST00000503324 MYH16Q9H6N6 1097 aa22.96■■□□□ 1.27
SMAD1-204ENST00000503324 CHPF2Q9P2E5 772 aa22.96■■□□□ 1.27
SMAD1-204ENST00000503324 GOLGA2Q08379 1002 aa22.95■■□□□ 1.26
SMAD1-204ENST00000503324 TTLL7Q6ZT98 887 aa22.95■■□□□ 1.26
SMAD1-204ENST00000503324 FHDC1Q9C0D6 1143 aaPredicted RBP22.95■■□□□ 1.26
SMAD1-204ENST00000503324 EXOSC9Q06265 439 aaKnown RBP22.94■■□□□ 1.26
SMAD1-204ENST00000503324 NFIXQ14938 502 aa22.94■■□□□ 1.26
SMAD1-204ENST00000503324 DBF4Q9UBU7 674 aaPredicted RBP22.94■■□□□ 1.26
SMAD1-204ENST00000503324 POLRMTO00411 1230 aaKnown RBP22.93■■□□□ 1.26
SMAD1-204ENST00000503324 RGL2O15211 777 aa22.93■■□□□ 1.26
SMAD1-204ENST00000503324 TWISTNBQ3B726 338 aaPredicted RBP22.93■■□□□ 1.26
SMAD1-204ENST00000503324 TBC1D9BQ66K14 1250 aa22.93■■□□□ 1.26
SMAD1-204ENST00000503324 SLFN5Q08AF3 891 aa22.92■■□□□ 1.26
SMAD1-204ENST00000503324 MAP3K15Q6ZN16 1313 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms