RNA–Protein interactions for RNA: ENST00000503030.1

TSPAN17-203, Transcript of tetraspanin 17, humanhuman

TSL 3

Gene TSPAN17, Length 909 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-203ENST00000503030 MTFR1LQ9H019 292 aa21.98■■□□□ 1.11
TSPAN17-203ENST00000503030 SALL2Q9Y467 1007 aaPredicted RBP21.98■■□□□ 1.11
TSPAN17-203ENST00000503030 SNRPA1P09661 255 aaKnown RBP21.97■■□□□ 1.11
TSPAN17-203ENST00000503030 LRP5O75197 1615 aa21.96■■□□□ 1.11
TSPAN17-203ENST00000503030 EIF4A1P60842 406 aaKnown RBP21.96■■□□□ 1.11
TSPAN17-203ENST00000503030 TRAPPC3LQ5T215 181 aa21.96■■□□□ 1.11
TSPAN17-203ENST00000503030 SLC16A10Q8TF71 515 aa21.96■■□□□ 1.11
TSPAN17-203ENST00000503030 ZBTB1Q9Y2K1 713 aa21.96■■□□□ 1.11
TSPAN17-203ENST00000503030 CANXP27824 592 aaKnown RBP21.95■■□□□ 1.1
TSPAN17-203ENST00000503030 MSL1Q68DK7 614 aa21.95■■□□□ 1.1
TSPAN17-203ENST00000503030 BABAM1Q9NWV8 329 aa21.95■■□□□ 1.1
TSPAN17-203ENST00000503030 USP16Q9Y5T5 823 aa21.95■■□□□ 1.1
TSPAN17-203ENST00000503030 CALD1Q05682 793 aaKnown RBP21.94■■□□□ 1.1
TSPAN17-203ENST00000503030 CHL1O00533 1208 aa21.93■■□□□ 1.1
TSPAN17-203ENST00000503030 ADRA2BP18089 450 aa21.93■■□□□ 1.1
TSPAN17-203ENST00000503030 RFC4P35249 363 aa21.93■■□□□ 1.1
TSPAN17-203ENST00000503030 ARHGEF1Q92888 912 aaKnown RBP21.93■■□□□ 1.1
TSPAN17-203ENST00000503030 SOS1Q07889 1333 aaPredicted RBP21.92■■□□□ 1.1
TSPAN17-203ENST00000503030 A1BGP04217 495 aa21.92■■□□□ 1.1
TSPAN17-203ENST00000503030 CFAP44Q96MT7 982 aa21.92■■□□□ 1.1
TSPAN17-203ENST00000503030 PPP1R1BQ9UD71 204 aaPredicted RBP21.92■■□□□ 1.1
TSPAN17-203ENST00000503030 ZNF330Q9Y3S2 320 aaPredicted RBP21.92■■□□□ 1.1
TSPAN17-203ENST00000503030 GIGYF1O75420 1035 aaPredicted RBP21.91■■□□□ 1.1
TSPAN17-203ENST00000503030 CCDC27Q2M243 656 aa21.91■■□□□ 1.1
TSPAN17-203ENST00000503030 WWC1Q8IX03 1113 aa21.91■■□□□ 1.1
TSPAN17-203ENST00000503030 C4AP0C0L4 1744 aa21.91■■□□□ 1.1
TSPAN17-203ENST00000503030 LAMB4A4D0S4 1761 aa21.9■■□□□ 1.1
TSPAN17-203ENST00000503030 PTGER2P43116 358 aa21.9■■□□□ 1.1
TSPAN17-203ENST00000503030 PIP4K2AP48426 406 aaPredicted RBP21.9■■□□□ 1.1
TSPAN17-203ENST00000503030 GNAI1P63096 354 aa21.9■■□□□ 1.1
TSPAN17-203ENST00000503030 IFT57Q9NWB7 429 aa21.9■■□□□ 1.1
TSPAN17-203ENST00000503030 COL15A1P39059 1388 aa21.89■■□□□ 1.1
TSPAN17-203ENST00000503030 POLD1P28340 1107 aa21.89■■□□□ 1.09
TSPAN17-203ENST00000503030 MBIPQ9NS73 344 aa21.89■■□□□ 1.09
TSPAN17-203ENST00000503030 KRT24Q2M2I5 525 aa21.88■■□□□ 1.09
TSPAN17-203ENST00000503030 SRP68Q9UHB9 627 aaKnown RBP21.88■■□□□ 1.09
TSPAN17-203ENST00000503030 ZNF853P0CG23 659 aa21.87■■□□□ 1.09
TSPAN17-203ENST00000503030 NCBP3Q53F19 620 aaKnown RBP21.87■■□□□ 1.09
TSPAN17-203ENST00000503030 NPM2Q86SE8 214 aaKnown RBP21.87■■□□□ 1.09
TSPAN17-203ENST00000503030 SGIP1Q9BQI5 828 aa21.87■■□□□ 1.09
TSPAN17-203ENST00000503030 IL6STP40189 918 aaPredicted RBP21.86■■□□□ 1.09
TSPAN17-203ENST00000503030 EIF5P55010 431 aaKnown RBP21.86■■□□□ 1.09
TSPAN17-203ENST00000503030 ARXQ96QS3 562 aa21.86■■□□□ 1.09
TSPAN17-203ENST00000503030 USP42Q9H9J4 1324 aaKnown RBP21.85■■□□□ 1.09
TSPAN17-203ENST00000503030 ZPR1O75312 459 aa21.85■■□□□ 1.09
TSPAN17-203ENST00000503030 EIF2S2P20042 333 aaKnown RBP21.85■■□□□ 1.09
TSPAN17-203ENST00000503030 COL24A1Q17RW2 1714 aa21.84■■□□□ 1.09
TSPAN17-203ENST00000503030 A0A087WZG4 1122 aa21.84■■□□□ 1.09
TSPAN17-203ENST00000503030 NBPF26B4DH59 902 aa21.84■■□□□ 1.09
TSPAN17-203ENST00000503030 GYS1P13807 737 aa21.84■■□□□ 1.09
TSPAN17-203ENST00000503030 USPL1Q5W0Q7 1092 aa21.84■■□□□ 1.09
TSPAN17-203ENST00000503030 NBPF10Q6P3W6 841 aaKnown RBP21.84■■□□□ 1.09
TSPAN17-203ENST00000503030 NBPF15Q8N660 670 aa21.84■■□□□ 1.09
TSPAN17-203ENST00000503030 NECTIN2Q92692 538 aa21.83■■□□□ 1.09
TSPAN17-203ENST00000503030 TSR2Q969E8 191 aaKnown RBP21.83■■□□□ 1.09
TSPAN17-203ENST00000503030 NARFQ9UHQ1 456 aa21.83■■□□□ 1.09
TSPAN17-203ENST00000503030 TBC1D2BQ9UPU7 963 aa21.83■■□□□ 1.09
TSPAN17-203ENST00000503030 WDR63Q8IWG1 891 aa21.82■■□□□ 1.08
TSPAN17-203ENST00000503030 KLHL34Q8N239 644 aa21.82■■□□□ 1.08
TSPAN17-203ENST00000503030 NLGN1Q8N2Q7 840 aa21.82■■□□□ 1.08
TSPAN17-203ENST00000503030 NGEFQ8N5V2 710 aa21.82■■□□□ 1.08
TSPAN17-203ENST00000503030 IL16Q14005 1332 aa21.81■■□□□ 1.08
TSPAN17-203ENST00000503030 MYL6BP14649 208 aa21.81■■□□□ 1.08
TSPAN17-203ENST00000503030 FKBP8Q14318 412 aa21.81■■□□□ 1.08
TSPAN17-203ENST00000503030 ELL2O00472 640 aaPredicted RBP21.8■■□□□ 1.08
TSPAN17-203ENST00000503030 MMP10P09238 476 aa21.8■■□□□ 1.08
TSPAN17-203ENST00000503030 DUSP27Q5VZP5 1158 aa21.8■■□□□ 1.08
TSPAN17-203ENST00000503030 DZIP3Q86Y13 1208 aaKnown RBP21.8■■□□□ 1.08
TSPAN17-203ENST00000503030 HDGFL1Q5TGJ6 251 aa21.78■■□□□ 1.08
TSPAN17-203ENST00000503030 FHDC1Q9C0D6 1143 aaPredicted RBP21.78■■□□□ 1.08
TSPAN17-203ENST00000503030 ERBB4Q15303 1308 aa21.78■■□□□ 1.08
TSPAN17-203ENST00000503030 ANXA1P04083 346 aa21.77■■□□□ 1.08
TSPAN17-203ENST00000503030 HOXB7P09629 217 aa21.77■■□□□ 1.08
TSPAN17-203ENST00000503030 C8orf58Q8NAV2 365 aa21.77■■□□□ 1.08
TSPAN17-203ENST00000503030 BCL2L12Q9HB09 334 aa21.77■■□□□ 1.08
TSPAN17-203ENST00000503030 FANCIQ9NVI1 1328 aa21.77■■□□□ 1.07
TSPAN17-203ENST00000503030 SCN7AQ01118 1682 aa21.76■■□□□ 1.07
TSPAN17-203ENST00000503030 PROSER3Q2NL68 480 aa21.76■■□□□ 1.07
TSPAN17-203ENST00000503030 CAMTA2O94983 1202 aa21.75■■□□□ 1.07
TSPAN17-203ENST00000503030 SPINK5Q9NQ38 1064 aaPredicted RBP21.75■■□□□ 1.07
TSPAN17-203ENST00000503030 PARP3Q9Y6F1 533 aa21.75■■□□□ 1.07
TSPAN17-203ENST00000503030 PDIA6Q15084 440 aa21.74■■□□□ 1.07
TSPAN17-203ENST00000503030 BICDL1Q6ZP65 573 aa21.74■■□□□ 1.07
TSPAN17-203ENST00000503030 TSPYL6Q8N831 410 aa21.74■■□□□ 1.07
TSPAN17-203ENST00000503030 CHPF2Q9P2E5 772 aa21.74■■□□□ 1.07
TSPAN17-203ENST00000503030 ZNF521Q96K83 1311 aa21.74■■□□□ 1.07
TSPAN17-203ENST00000503030 BCORQ6W2J9 1755 aa21.74■■□□□ 1.07
TSPAN17-203ENST00000503030 DDR1Q08345 913 aa21.73■■□□□ 1.07
TSPAN17-203ENST00000503030 GOLGA2Q08379 1002 aa21.73■■□□□ 1.07
TSPAN17-203ENST00000503030 KIF6Q6ZMV9 814 aa21.73■■□□□ 1.07
TSPAN17-203ENST00000503030 TTLL7Q6ZT98 887 aa21.73■■□□□ 1.07
TSPAN17-203ENST00000503030 MYH16Q9H6N6 1097 aa21.73■■□□□ 1.07
TSPAN17-203ENST00000503030 NFIXQ14938 502 aa21.72■■□□□ 1.07
TSPAN17-203ENST00000503030 SYT17Q9BSW7 474 aa21.72■■□□□ 1.07
TSPAN17-203ENST00000503030 DDX21Q9NR30 783 aaKnown RBP eCLIP21.72■■□□□ 1.07
TSPAN17-203ENST00000503030 TM4SF1P30408 202 aa21.71■■□□□ 1.07
TSPAN17-203ENST00000503030 TBC1D9BQ66K14 1250 aa21.71■■□□□ 1.07
TSPAN17-203ENST00000503030 EXOSC9Q06265 439 aaKnown RBP21.7■■□□□ 1.06
TSPAN17-203ENST00000503030 AIMP1Q12904 312 aaKnown RBP21.7■■□□□ 1.06
TSPAN17-203ENST00000503030 TWISTNBQ3B726 338 aaPredicted RBP21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms