RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 PASKQ96RG2 1323 aa7.04□□□□□ -1.28
HTT-202ENST00000502820 USP54Q70EL1 1684 aa7.04□□□□□ -1.28
HTT-202ENST00000502820 TNRC6CQ9HCJ0 1690 aaKnown RBP7.04□□□□□ -1.28
HTT-202ENST00000502820 SERPINB2P05120 415 aa7.04□□□□□ -1.28
HTT-202ENST00000502820 ECE1P42892 770 aa7.04□□□□□ -1.28
HTT-202ENST00000502820 CRKLP46109 303 aaKnown RBP7.04□□□□□ -1.28
HTT-202ENST00000502820 CABP4P57796 275 aa7.04□□□□□ -1.28
HTT-202ENST00000502820 FMR1Q06787 632 aaKnown RBP eCLIP7.04□□□□□ -1.28
HTT-202ENST00000502820 IFNL2Q8IZJ0 200 aa7.04□□□□□ -1.28
HTT-202ENST00000502820 SLC4A9Q96Q91 983 aa7.04□□□□□ -1.28
HTT-202ENST00000502820 TAOK3Q9H2K8 898 aa7.04□□□□□ -1.28
HTT-202ENST00000502820 SUPT16HQ9Y5B9 1047 aaKnown RBP7.04□□□□□ -1.28
HTT-202ENST00000502820 CD163L1Q9NR16 1453 aa7.04□□□□□ -1.28
HTT-202ENST00000502820 EDC4Q6P2E9 1401 aaKnown RBP7.03□□□□□ -1.28
HTT-202ENST00000502820 RASSF10A6NK89 507 aa7.03□□□□□ -1.28
HTT-202ENST00000502820 ITGBL1O95965 494 aaPredicted RBP7.03□□□□□ -1.28
HTT-202ENST00000502820 EPHX2P34913 555 aa7.03□□□□□ -1.28
HTT-202ENST00000502820 RC3H1Q5TC82 1133 aaKnown RBP7.03□□□□□ -1.28
HTT-202ENST00000502820 PRPF38BQ5VTL8 546 aaKnown RBP7.03□□□□□ -1.28
HTT-202ENST00000502820 CARD11Q9BXL7 1154 aa7.03□□□□□ -1.28
HTT-202ENST00000502820 ZNF408Q9H9D4 720 aa7.03□□□□□ -1.28
HTT-202ENST00000502820 HACL1Q9UJ83 578 aa7.03□□□□□ -1.28
HTT-202ENST00000502820 ZNF330Q9Y3S2 320 aaPredicted RBP7.03□□□□□ -1.28
HTT-202ENST00000502820 GJA3Q9Y6H8 435 aa7.03□□□□□ -1.28
HTT-202ENST00000502820 PKD1L3Q7Z443 1732 aa7.03□□□□□ -1.28
HTT-202ENST00000502820 A0A1W2PP64 1363 aa7.03□□□□□ -1.28
HTT-202ENST00000502820 RNF123Q5XPI4 1314 aa7.02□□□□□ -1.28
HTT-202ENST00000502820 USP42Q9H9J4 1324 aaKnown RBP7.02□□□□□ -1.28
HTT-202ENST00000502820 TOGARAM1Q9Y4F4 1720 aa7.02□□□□□ -1.29
HTT-202ENST00000502820 PHKG2P15735 406 aa7.02□□□□□ -1.29
HTT-202ENST00000502820 NFIXQ14938 502 aa7.02□□□□□ -1.29
HTT-202ENST00000502820 PIAS4Q8N2W9 510 aaPredicted RBP7.02□□□□□ -1.29
HTT-202ENST00000502820 LTN1O94822 1766 aa7.02□□□□□ -1.29
HTT-202ENST00000502820 CNTNAP4Q9C0A0 1308 aa7.01□□□□□ -1.29
HTT-202ENST00000502820 C4AP0C0L4 1744 aa7.01□□□□□ -1.29
HTT-202ENST00000502820 TRAF5O00463 557 aa7.01□□□□□ -1.29
HTT-202ENST00000502820 TM4SF1P30408 202 aa7.01□□□□□ -1.29
HTT-202ENST00000502820 NKX1-1Q15270 411 aaPredicted RBP7.01□□□□□ -1.29
HTT-202ENST00000502820 PUS7Q96PZ0 661 aaKnown RBP7.01□□□□□ -1.29
HTT-202ENST00000502820 TESK2Q96S53 571 aa7.01□□□□□ -1.29
HTT-202ENST00000502820 DDX21Q9NR30 783 aaKnown RBP eCLIP7.01□□□□□ -1.29
HTT-202ENST00000502820 CANXP27824 592 aaKnown RBP7□□□□□ -1.29
HTT-202ENST00000502820 CIAPIN1Q6FI81 312 aa7□□□□□ -1.29
HTT-202ENST00000502820 PNMA8AQ86V59 439 aaPredicted RBP7□□□□□ -1.29
HTT-202ENST00000502820 NBPF15Q8N660 670 aa7□□□□□ -1.29
HTT-202ENST00000502820 TSHZ2Q9NRE2 1034 aa7□□□□□ -1.29
HTT-202ENST00000502820 ZNF277Q9NRM2 450 aaPredicted RBP7□□□□□ -1.29
HTT-202ENST00000502820 EMILIN1Q9Y6C2 1016 aa7□□□□□ -1.29
HTT-202ENST00000502820 KDM6AO15550 1401 aaPredicted RBP7□□□□□ -1.29
HTT-202ENST00000502820 ZNF541Q9H0D2 1346 aa7□□□□□ -1.29
HTT-202ENST00000502820 UBR3Q6ZT12 1888 aa6.99□□□□□ -1.29
HTT-202ENST00000502820 ST20-MTHFSA0A0A6YYL1 179 aa6.99□□□□□ -1.29
HTT-202ENST00000502820 LMOD1P29536 600 aaPredicted RBP6.99□□□□□ -1.29
HTT-202ENST00000502820 PDE6BP35913 854 aa6.99□□□□□ -1.29
HTT-202ENST00000502820 TNNT2P45379 298 aaPredicted RBP6.99□□□□□ -1.29
HTT-202ENST00000502820 MTHFSP49914 203 aa6.99□□□□□ -1.29
HTT-202ENST00000502820 NFATC2IPQ8NCF5 419 aa6.99□□□□□ -1.29
HTT-202ENST00000502820 KIAA1551Q9HCM1 1747 aa6.98□□□□□ -1.29
HTT-202ENST00000502820 RTL1A6NKG5 1358 aa6.98□□□□□ -1.29
HTT-202ENST00000502820 INSRP06213 1382 aa6.98□□□□□ -1.29
HTT-202ENST00000502820 CARMIL3Q8ND23 1372 aa6.98□□□□□ -1.29
HTT-202ENST00000502820 FYB1O15117 783 aa6.98□□□□□ -1.29
HTT-202ENST00000502820 SLC24A1O60721 1099 aa6.98□□□□□ -1.29
HTT-202ENST00000502820 CELF2O95319 508 aaKnown RBP6.98□□□□□ -1.29
HTT-202ENST00000502820 PRPF40BQ6NWY9 871 aaKnown RBP6.98□□□□□ -1.29
HTT-202ENST00000502820 INTS5Q6P9B9 1019 aaKnown RBP6.98□□□□□ -1.29
HTT-202ENST00000502820 DNAJC10Q8IXB1 793 aa6.98□□□□□ -1.29
HTT-202ENST00000502820 MIER1Q8N108 512 aa6.98□□□□□ -1.29
HTT-202ENST00000502820 EYA1Q99502 592 aa6.98□□□□□ -1.29
HTT-202ENST00000502820 TIMELESSQ9UNS1 1208 aa6.98□□□□□ -1.29
HTT-202ENST00000502820 FLT4P35916 1363 aa6.97□□□□□ -1.29
HTT-202ENST00000502820 FAM208AQ9UK61 1670 aaKnown RBP6.97□□□□□ -1.29
HTT-202ENST00000502820 TAF1LQ8IZX4 1826 aa6.97□□□□□ -1.29
HTT-202ENST00000502820 ERVV-2B6SEH9 535 aa6.97□□□□□ -1.29
HTT-202ENST00000502820 DLL1O00548 723 aa6.97□□□□□ -1.29
HTT-202ENST00000502820 CA12O43570 354 aa6.97□□□□□ -1.29
HTT-202ENST00000502820 HSP90AB1P08238 724 aaKnown RBP6.97□□□□□ -1.29
HTT-202ENST00000502820 MAP2K2P36507 400 aa6.97□□□□□ -1.29
HTT-202ENST00000502820 C1orf141Q5JVX7 400 aa6.97□□□□□ -1.29
HTT-202ENST00000502820 ZNF530Q6P9A1 599 aaPredicted RBP6.97□□□□□ -1.29
HTT-202ENST00000502820 OLFM4Q6UX06 510 aa6.97□□□□□ -1.29
HTT-202ENST00000502820 MON2Q7Z3U7 1717 aa6.97□□□□□ -1.29
HTT-202ENST00000502820 NPM2Q86SE8 214 aaKnown RBP6.97□□□□□ -1.29
HTT-202ENST00000502820 GCC1Q96CN9 775 aa6.97□□□□□ -1.29
HTT-202ENST00000502820 KDRP35968 1356 aa6.96□□□□□ -1.29
HTT-202ENST00000502820 FAM177BA6PVY3 158 aa6.96□□□□□ -1.3
HTT-202ENST00000502820 EIF6P56537 245 aaKnown RBP6.96□□□□□ -1.3
HTT-202ENST00000502820 PLEKHO1Q53GL0 409 aaPredicted RBP6.96□□□□□ -1.3
HTT-202ENST00000502820 CCDC93Q567U6 631 aa6.96□□□□□ -1.3
HTT-202ENST00000502820 HABP4Q5JVS0 413 aaKnown RBP6.96□□□□□ -1.3
HTT-202ENST00000502820 ERICH6BQ5W0A0 696 aa6.96□□□□□ -1.3
HTT-202ENST00000502820 CST9Q5W186 159 aa6.96□□□□□ -1.3
HTT-202ENST00000502820 TBC1D9BQ66K14 1250 aa6.96□□□□□ -1.3
HTT-202ENST00000502820 SYNE4Q8N205 404 aa6.96□□□□□ -1.3
HTT-202ENST00000502820 JDP2Q8WYK2 163 aa6.96□□□□□ -1.3
HTT-202ENST00000502820 CNKSR1Q969H4 720 aa6.96□□□□□ -1.3
HTT-202ENST00000502820 L3MBTL3Q96JM7 780 aaPredicted RBP6.96□□□□□ -1.3
HTT-202ENST00000502820 NARFQ9UHQ1 456 aa6.96□□□□□ -1.3
HTT-202ENST00000502820 TLL2Q9Y6L7 1015 aa6.96□□□□□ -1.3
HTT-202ENST00000502820 FANCIQ9NVI1 1328 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms