RNA–Protein interactions for RNA: ENST00000502724.5

PRDM2-211, Transcript of PR/SET domain 2, humanhuman

TSL 4

Gene PRDM2, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-211ENST00000502724 CCDC87Q9NVE4 849 aa13.24□□□□□ -0.29
PRDM2-211ENST00000502724 LAMB4A4D0S4 1761 aa13.24□□□□□ -0.29
PRDM2-211ENST00000502724 SOS1Q07889 1333 aaPredicted RBP13.23□□□□□ -0.29
PRDM2-211ENST00000502724 PSDA5PKW4 1024 aaPredicted RBP13.23□□□□□ -0.29
PRDM2-211ENST00000502724 RPS6KA4O75676 772 aa13.23□□□□□ -0.29
PRDM2-211ENST00000502724 CYP19A1P11511 503 aaPredicted RBP13.23□□□□□ -0.29
PRDM2-211ENST00000502724 EIF4A1P60842 406 aaKnown RBP13.23□□□□□ -0.29
PRDM2-211ENST00000502724 LAS1LQ9Y4W2 734 aaKnown RBP13.23□□□□□ -0.29
PRDM2-211ENST00000502724 TUBGCP6Q96RT7 1819 aa13.23□□□□□ -0.29
PRDM2-211ENST00000502724 ERBB4Q15303 1308 aa13.22□□□□□ -0.29
PRDM2-211ENST00000502724 A0A087WZG4 1122 aa13.22□□□□□ -0.29
PRDM2-211ENST00000502724 ZNF853P0CG23 659 aa13.22□□□□□ -0.29
PRDM2-211ENST00000502724 TRAPPC3LQ5T215 181 aa13.22□□□□□ -0.29
PRDM2-211ENST00000502724 MIS18AQ9NYP9 233 aa13.22□□□□□ -0.29
PRDM2-211ENST00000502724 CASZ1Q86V15 1759 aa13.22□□□□□ -0.29
PRDM2-211ENST00000502724 PNPLA7Q6ZV29 1317 aa13.21□□□□□ -0.29
PRDM2-211ENST00000502724 KCNQ3O43525 872 aa13.21□□□□□ -0.29
PRDM2-211ENST00000502724 GIGYF1O75420 1035 aaPredicted RBP13.21□□□□□ -0.29
PRDM2-211ENST00000502724 MYH16Q9H6N6 1097 aa13.21□□□□□ -0.29
PRDM2-211ENST00000502724 MYH14Q7Z406 1995 aaKnown RBP13.21□□□□□ -0.29
PRDM2-211ENST00000502724 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.2□□□□□ -0.3
PRDM2-211ENST00000502724 IL6STP40189 918 aaPredicted RBP13.2□□□□□ -0.3
PRDM2-211ENST00000502724 MTFR1LQ9H019 292 aa13.2□□□□□ -0.3
PRDM2-211ENST00000502724 SPON1Q9HCB6 807 aa13.2□□□□□ -0.3
PRDM2-211ENST00000502724 MBIPQ9NS73 344 aa13.2□□□□□ -0.3
PRDM2-211ENST00000502724 RFC4P35249 363 aa13.19□□□□□ -0.3
PRDM2-211ENST00000502724 INTS5Q6P9B9 1019 aaKnown RBP13.19□□□□□ -0.3
PRDM2-211ENST00000502724 LRP5O75197 1615 aa13.18□□□□□ -0.3
PRDM2-211ENST00000502724 PHF14O94880 888 aa13.18□□□□□ -0.3
PRDM2-211ENST00000502724 ZBTB1Q9Y2K1 713 aa13.18□□□□□ -0.3
PRDM2-211ENST00000502724 SALL2Q9Y467 1007 aaPredicted RBP13.18□□□□□ -0.3
PRDM2-211ENST00000502724 USP16Q9Y5T5 823 aa13.18□□□□□ -0.3
PRDM2-211ENST00000502724 COL15A1P39059 1388 aa13.18□□□□□ -0.3
PRDM2-211ENST00000502724 RGL2O15211 777 aa13.17□□□□□ -0.3
PRDM2-211ENST00000502724 ZPR1O75312 459 aa13.17□□□□□ -0.3
PRDM2-211ENST00000502724 CANXP27824 592 aaKnown RBP13.17□□□□□ -0.3
PRDM2-211ENST00000502724 POLD1P28340 1107 aa13.17□□□□□ -0.3
PRDM2-211ENST00000502724 GOLGA2Q08379 1002 aa13.17□□□□□ -0.3
PRDM2-211ENST00000502724 COL23A1Q86Y22 540 aaPredicted RBP13.17□□□□□ -0.3
PRDM2-211ENST00000502724 NLGN1Q8N2Q7 840 aa13.17□□□□□ -0.3
PRDM2-211ENST00000502724 ZNF521Q96K83 1311 aa13.16□□□□□ -0.3
PRDM2-211ENST00000502724 E9PSI1 815 aa13.16□□□□□ -0.3
PRDM2-211ENST00000502724 EIF5P55010 431 aaKnown RBP13.16□□□□□ -0.3
PRDM2-211ENST00000502724 ARHGEF1Q92888 912 aaKnown RBP13.16□□□□□ -0.3
PRDM2-211ENST00000502724 C4AP0C0L4 1744 aa13.16□□□□□ -0.3
PRDM2-211ENST00000502724 DUSP27Q5VZP5 1158 aa13.15□□□□□ -0.3
PRDM2-211ENST00000502724 NARFQ9UHQ1 456 aa13.15□□□□□ -0.3
PRDM2-211ENST00000502724 COL24A1Q17RW2 1714 aa13.15□□□□□ -0.3
PRDM2-211ENST00000502724 USP42Q9H9J4 1324 aaKnown RBP13.14□□□□□ -0.31
PRDM2-211ENST00000502724 FANCIQ9NVI1 1328 aa13.14□□□□□ -0.31
PRDM2-211ENST00000502724 A1BGP04217 495 aa13.14□□□□□ -0.31
PRDM2-211ENST00000502724 HDGFL1Q5TGJ6 251 aa13.14□□□□□ -0.31
PRDM2-211ENST00000502724 DBF4Q9UBU7 674 aaPredicted RBP13.14□□□□□ -0.31
PRDM2-211ENST00000502724 ZNF652Q9Y2D9 606 aa13.14□□□□□ -0.31
PRDM2-211ENST00000502724 CACNA1FO60840 1977 aa13.13□□□□□ -0.31
PRDM2-211ENST00000502724 PRAMEF22A3QJZ6 481 aa13.13□□□□□ -0.31
PRDM2-211ENST00000502724 ZBTB7AO95365 584 aa13.13□□□□□ -0.31
PRDM2-211ENST00000502724 EIF2S2P20042 333 aaKnown RBP13.13□□□□□ -0.31
PRDM2-211ENST00000502724 HNRNPUQ00839 825 aaKnown RBP eCLIP13.13□□□□□ -0.31
PRDM2-211ENST00000502724 CCDC30Q5VVM6 783 aa13.13□□□□□ -0.31
PRDM2-211ENST00000502724 ZNF330Q9Y3S2 320 aaPredicted RBP13.13□□□□□ -0.31
PRDM2-211ENST00000502724 TWISTNBQ3B726 338 aaPredicted RBP13.12□□□□□ -0.31
PRDM2-211ENST00000502724 CLEC4GQ6UXB4 293 aa13.12□□□□□ -0.31
PRDM2-211ENST00000502724 KIF6Q6ZMV9 814 aa13.12□□□□□ -0.31
PRDM2-211ENST00000502724 DZIP3Q86Y13 1208 aaKnown RBP13.12□□□□□ -0.31
PRDM2-211ENST00000502724 TSR2Q969E8 191 aaKnown RBP13.12□□□□□ -0.31
PRDM2-211ENST00000502724 STK31Q9BXU1 1019 aa13.12□□□□□ -0.31
PRDM2-211ENST00000502724 DDX21Q9NR30 783 aaKnown RBP eCLIP13.12□□□□□ -0.31
PRDM2-211ENST00000502724 HYPKQ9NX55 129 aa13.12□□□□□ -0.31
PRDM2-211ENST00000502724 PPP1R1BQ9UD71 204 aaPredicted RBP13.12□□□□□ -0.31
PRDM2-211ENST00000502724 SCN7AQ01118 1682 aa13.12□□□□□ -0.31
PRDM2-211ENST00000502724 SENP3-EIF4A1A0A087X0R7 540 aa13.11□□□□□ -0.31
PRDM2-211ENST00000502724 GYS1P13807 737 aa13.11□□□□□ -0.31
PRDM2-211ENST00000502724 AMIGO3Q86WK7 504 aa13.11□□□□□ -0.31
PRDM2-211ENST00000502724 ZNF428Q96B54 188 aa13.11□□□□□ -0.31
PRDM2-211ENST00000502724 ZBED9Q6R2W3 1325 aa13.11□□□□□ -0.31
PRDM2-211ENST00000502724 BCORQ6W2J9 1755 aa13.1□□□□□ -0.31
PRDM2-211ENST00000502724 NBPF26B4DH59 902 aa13.1□□□□□ -0.31
PRDM2-211ENST00000502724 ERVV-1B6SEH8 477 aa13.1□□□□□ -0.31
PRDM2-211ENST00000502724 CT47B1P0C2W7 299 aaPredicted RBP13.1□□□□□ -0.31
PRDM2-211ENST00000502724 SLFN5Q08AF3 891 aa13.1□□□□□ -0.31
PRDM2-211ENST00000502724 NBPF10Q6P3W6 841 aaKnown RBP13.1□□□□□ -0.31
PRDM2-211ENST00000502724 NBPF15Q8N660 670 aa13.1□□□□□ -0.31
PRDM2-211ENST00000502724 C8orf58Q8NAV2 365 aa13.1□□□□□ -0.31
PRDM2-211ENST00000502724 ARXQ96QS3 562 aa13.1□□□□□ -0.31
PRDM2-211ENST00000502724 PDGFDQ9GZP0 370 aaPredicted RBP13.1□□□□□ -0.31
PRDM2-211ENST00000502724 ATF5Q9Y2D1 282 aaPredicted RBP13.1□□□□□ -0.31
PRDM2-211ENST00000502724 MYL6BP14649 208 aa13.09□□□□□ -0.31
PRDM2-211ENST00000502724 KRT24Q2M2I5 525 aa13.09□□□□□ -0.31
PRDM2-211ENST00000502724 USPL1Q5W0Q7 1092 aa13.09□□□□□ -0.31
PRDM2-211ENST00000502724 PPP4R3CPQ6ZMV5 832 aa13.09□□□□□ -0.31
PRDM2-211ENST00000502724 SGIP1Q9BQI5 828 aa13.09□□□□□ -0.31
PRDM2-211ENST00000502724 PARP3Q9Y6F1 533 aa13.09□□□□□ -0.31
PRDM2-211ENST00000502724 ELL2O00472 640 aaPredicted RBP13.08□□□□□ -0.32
PRDM2-211ENST00000502724 DDX58O95786 925 aaKnown RBP13.08□□□□□ -0.32
PRDM2-211ENST00000502724 PTGER2P43116 358 aa13.08□□□□□ -0.32
PRDM2-211ENST00000502724 EXOSC9Q06265 439 aaKnown RBP13.08□□□□□ -0.32
PRDM2-211ENST00000502724 PDIA6Q15084 440 aa13.08□□□□□ -0.32
PRDM2-211ENST00000502724 HSP90AB3PQ58FF7 597 aa13.08□□□□□ -0.32
PRDM2-211ENST00000502724 CHPF2Q9P2E5 772 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms