RNA–Protein interactions for RNA: ENST00000502443.1

USP46-203, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-203ENST00000502443 TSPYL4Q9UJ04 414 aa9.57□□□□□ -0.88
USP46-203ENST00000502443 SNRPA1P09661 255 aaKnown RBP9.56□□□□□ -0.88
USP46-203ENST00000502443 ADRA2BP18089 450 aa9.56□□□□□ -0.88
USP46-203ENST00000502443 CANXP27824 592 aaKnown RBP9.56□□□□□ -0.88
USP46-203ENST00000502443 RFC4P35249 363 aa9.56□□□□□ -0.88
USP46-203ENST00000502443 MSL1Q68DK7 614 aa9.56□□□□□ -0.88
USP46-203ENST00000502443 ARHGEF1Q92888 912 aaKnown RBP9.56□□□□□ -0.88
USP46-203ENST00000502443 LAS1LQ9Y4W2 734 aaKnown RBP9.56□□□□□ -0.88
USP46-203ENST00000502443 KDM3BQ7LBC6 1761 aa9.55□□□□□ -0.88
USP46-203ENST00000502443 PRAMEF22A3QJZ6 481 aa9.55□□□□□ -0.88
USP46-203ENST00000502443 POLD1P28340 1107 aa9.55□□□□□ -0.88
USP46-203ENST00000502443 BABAM1Q9NWV8 329 aa9.55□□□□□ -0.88
USP46-203ENST00000502443 ZBTB1Q9Y2K1 713 aa9.55□□□□□ -0.88
USP46-203ENST00000502443 USP16Q9Y5T5 823 aa9.55□□□□□ -0.88
USP46-203ENST00000502443 CHL1O00533 1208 aa9.54□□□□□ -0.88
USP46-203ENST00000502443 A1BGP04217 495 aa9.54□□□□□ -0.88
USP46-203ENST00000502443 EIF4A1P60842 406 aaKnown RBP9.54□□□□□ -0.88
USP46-203ENST00000502443 SGIP1Q9BQI5 828 aa9.54□□□□□ -0.88
USP46-203ENST00000502443 ZNF330Q9Y3S2 320 aaPredicted RBP9.54□□□□□ -0.88
USP46-203ENST00000502443 SOS1Q07889 1333 aaPredicted RBP9.54□□□□□ -0.88
USP46-203ENST00000502443 C4AP0C0L4 1744 aa9.53□□□□□ -0.88
USP46-203ENST00000502443 CCER2I3L3R5 266 aa9.53□□□□□ -0.88
USP46-203ENST00000502443 ZPR1O75312 459 aa9.53□□□□□ -0.88
USP46-203ENST00000502443 GIGYF1O75420 1035 aaPredicted RBP9.53□□□□□ -0.88
USP46-203ENST00000502443 CALD1Q05682 793 aaKnown RBP9.53□□□□□ -0.88
USP46-203ENST00000502443 NPM2Q86SE8 214 aaKnown RBP9.53□□□□□ -0.88
USP46-203ENST00000502443 CFAP44Q96MT7 982 aa9.53□□□□□ -0.88
USP46-203ENST00000502443 ARXQ96QS3 562 aa9.53□□□□□ -0.88
USP46-203ENST00000502443 SALL2Q9Y467 1007 aaPredicted RBP9.53□□□□□ -0.88
USP46-203ENST00000502443 COL24A1Q17RW2 1714 aa9.53□□□□□ -0.88
USP46-203ENST00000502443 COL15A1P39059 1388 aa9.52□□□□□ -0.88
USP46-203ENST00000502443 IL6STP40189 918 aaPredicted RBP9.52□□□□□ -0.89
USP46-203ENST00000502443 PIP4K2AP48426 406 aaPredicted RBP9.52□□□□□ -0.89
USP46-203ENST00000502443 EIF5P55010 431 aaKnown RBP9.52□□□□□ -0.89
USP46-203ENST00000502443 MIER1Q8N108 512 aa9.52□□□□□ -0.89
USP46-203ENST00000502443 NLGN1Q8N2Q7 840 aa9.52□□□□□ -0.89
USP46-203ENST00000502443 SRP68Q9UHB9 627 aaKnown RBP9.52□□□□□ -0.89
USP46-203ENST00000502443 USP42Q9H9J4 1324 aaKnown RBP9.52□□□□□ -0.89
USP46-203ENST00000502443 LAMB4A4D0S4 1761 aa9.51□□□□□ -0.89
USP46-203ENST00000502443 A0A087WZG4 1122 aa9.51□□□□□ -0.89
USP46-203ENST00000502443 GYS1P13807 737 aa9.51□□□□□ -0.89
USP46-203ENST00000502443 GNAI1P63096 354 aa9.51□□□□□ -0.89
USP46-203ENST00000502443 CCDC27Q2M243 656 aa9.51□□□□□ -0.89
USP46-203ENST00000502443 USPL1Q5W0Q7 1092 aa9.51□□□□□ -0.89
USP46-203ENST00000502443 WWC1Q8IX03 1113 aa9.51□□□□□ -0.89
USP46-203ENST00000502443 KLHL34Q8N239 644 aa9.51□□□□□ -0.89
USP46-203ENST00000502443 FHDC1Q9C0D6 1143 aaPredicted RBP9.51□□□□□ -0.89
USP46-203ENST00000502443 MBIPQ9NS73 344 aa9.51□□□□□ -0.89
USP46-203ENST00000502443 IFT57Q9NWB7 429 aa9.51□□□□□ -0.89
USP46-203ENST00000502443 NARFQ9UHQ1 456 aa9.51□□□□□ -0.89
USP46-203ENST00000502443 MMP10P09238 476 aa9.5□□□□□ -0.89
USP46-203ENST00000502443 ZNF853P0CG23 659 aa9.5□□□□□ -0.89
USP46-203ENST00000502443 EIF2S2P20042 333 aaKnown RBP9.5□□□□□ -0.89
USP46-203ENST00000502443 FKBP8Q14318 412 aa9.5□□□□□ -0.89
USP46-203ENST00000502443 KRT24Q2M2I5 525 aa9.5□□□□□ -0.89
USP46-203ENST00000502443 TBC1D2BQ9UPU7 963 aa9.5□□□□□ -0.89
USP46-203ENST00000502443 NBPF26B4DH59 902 aa9.49□□□□□ -0.89
USP46-203ENST00000502443 MYL6BP14649 208 aa9.49□□□□□ -0.89
USP46-203ENST00000502443 NCBP3Q53F19 620 aaKnown RBP9.49□□□□□ -0.89
USP46-203ENST00000502443 NBPF10Q6P3W6 841 aaKnown RBP9.49□□□□□ -0.89
USP46-203ENST00000502443 DZIP3Q86Y13 1208 aaKnown RBP9.49□□□□□ -0.89
USP46-203ENST00000502443 NGEFQ8N5V2 710 aa9.49□□□□□ -0.89
USP46-203ENST00000502443 NBPF15Q8N660 670 aa9.49□□□□□ -0.89
USP46-203ENST00000502443 SYT17Q9BSW7 474 aa9.49□□□□□ -0.89
USP46-203ENST00000502443 NECTIN2Q92692 538 aa9.48□□□□□ -0.89
USP46-203ENST00000502443 TSR2Q969E8 191 aaKnown RBP9.48□□□□□ -0.89
USP46-203ENST00000502443 BCL2L12Q9HB09 334 aa9.48□□□□□ -0.89
USP46-203ENST00000502443 PARP3Q9Y6F1 533 aa9.48□□□□□ -0.89
USP46-203ENST00000502443 ELL2O00472 640 aaPredicted RBP9.47□□□□□ -0.89
USP46-203ENST00000502443 DUSP27Q5VZP5 1158 aa9.47□□□□□ -0.89
USP46-203ENST00000502443 BICDL1Q6ZP65 573 aa9.47□□□□□ -0.89
USP46-203ENST00000502443 WDR63Q8IWG1 891 aa9.47□□□□□ -0.89
USP46-203ENST00000502443 IL16Q14005 1332 aa9.47□□□□□ -0.89
USP46-203ENST00000502443 ERBB4Q15303 1308 aa9.47□□□□□ -0.89
USP46-203ENST00000502443 CAMTA2O94983 1202 aa9.46□□□□□ -0.9
USP46-203ENST00000502443 HOXB7P09629 217 aa9.46□□□□□ -0.9
USP46-203ENST00000502443 TM4SF1P30408 202 aa9.46□□□□□ -0.9
USP46-203ENST00000502443 DDR1Q08345 913 aa9.46□□□□□ -0.9
USP46-203ENST00000502443 NFIXQ14938 502 aa9.46□□□□□ -0.9
USP46-203ENST00000502443 HDGFL1Q5TGJ6 251 aa9.46□□□□□ -0.9
USP46-203ENST00000502443 TBC1D9BQ66K14 1250 aa9.46□□□□□ -0.9
USP46-203ENST00000502443 CD2APQ9Y5K6 639 aa9.46□□□□□ -0.9
USP46-203ENST00000502443 SCN7AQ01118 1682 aa9.45□□□□□ -0.9
USP46-203ENST00000502443 POLRMTO00411 1230 aaKnown RBP9.45□□□□□ -0.9
USP46-203ENST00000502443 ANXA1P04083 346 aa9.45□□□□□ -0.9
USP46-203ENST00000502443 PDIA6Q15084 440 aa9.45□□□□□ -0.9
USP46-203ENST00000502443 PROSER3Q2NL68 480 aa9.45□□□□□ -0.9
USP46-203ENST00000502443 CLEC4GQ6UXB4 293 aa9.45□□□□□ -0.9
USP46-203ENST00000502443 KIF6Q6ZMV9 814 aa9.45□□□□□ -0.9
USP46-203ENST00000502443 C8orf58Q8NAV2 365 aa9.45□□□□□ -0.9
USP46-203ENST00000502443 NLGN2Q8NFZ4 835 aa9.45□□□□□ -0.9
USP46-203ENST00000502443 CHPF2Q9P2E5 772 aa9.45□□□□□ -0.9
USP46-203ENST00000502443 ZNF652Q9Y2D9 606 aa9.45□□□□□ -0.9
USP46-203ENST00000502443 BCORQ6W2J9 1755 aa9.45□□□□□ -0.9
USP46-203ENST00000502443 DCAF8L1A6NGE4 600 aa9.44□□□□□ -0.9
USP46-203ENST00000502443 HLFQ16534 295 aa9.44□□□□□ -0.9
USP46-203ENST00000502443 TTLL7Q6ZT98 887 aa9.44□□□□□ -0.9
USP46-203ENST00000502443 TSPYL6Q8N831 410 aa9.44□□□□□ -0.9
USP46-203ENST00000502443 SETDB2Q96T68 719 aa9.44□□□□□ -0.9
USP46-203ENST00000502443 DDX21Q9NR30 783 aaKnown RBP eCLIP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms