RNA–Protein interactions for RNA: ENST00000502367.1

NFKB1-203, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 456 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-203ENST00000502367 RASA1P20936 1047 aa9.76□□□□□ -0.85
NFKB1-203ENST00000502367 CRTC2Q53ET0 693 aaPredicted RBP9.76□□□□□ -0.85
NFKB1-203ENST00000502367 WDR44Q5JSH3 913 aa9.76□□□□□ -0.85
NFKB1-203ENST00000502367 KANK4Q5T7N3 995 aaPredicted RBP9.76□□□□□ -0.85
NFKB1-203ENST00000502367 TRIM22Q8IYM9 498 aa9.76□□□□□ -0.85
NFKB1-203ENST00000502367 GTF2E1P29083 439 aaPredicted RBP9.75□□□□□ -0.85
NFKB1-203ENST00000502367 INSM1Q01101 510 aaPredicted RBP9.75□□□□□ -0.85
NFKB1-203ENST00000502367 MTFR1Q15390 333 aa9.75□□□□□ -0.85
NFKB1-203ENST00000502367 CFAP70Q5T0N1 1121 aa9.75□□□□□ -0.85
NFKB1-203ENST00000502367 SH3PXD2AQ5TCZ1 1133 aa9.75□□□□□ -0.85
NFKB1-203ENST00000502367 ZSCAN1Q8NBB4 408 aa9.75□□□□□ -0.85
NFKB1-203ENST00000502367 TSEN2Q8NCE0 465 aaKnown RBP9.75□□□□□ -0.85
NFKB1-203ENST00000502367 KLRG1Q96E93 195 aa9.75□□□□□ -0.85
NFKB1-203ENST00000502367 CABP1Q9NZU7 370 aa9.75□□□□□ -0.85
NFKB1-203ENST00000502367 EPHA4P54764 986 aa9.74□□□□□ -0.85
NFKB1-203ENST00000502367 TRIM50Q86XT4 487 aa9.74□□□□□ -0.85
NFKB1-203ENST00000502367 WHAMMQ8TF30 809 aa9.74□□□□□ -0.85
NFKB1-203ENST00000502367 ZDHHC1Q8WTX9 485 aa9.74□□□□□ -0.85
NFKB1-203ENST00000502367 BIVM-ERCC5R4GMW8 1640 aa9.74□□□□□ -0.85
NFKB1-203ENST00000502367 CDK2AP1O14519 115 aa9.73□□□□□ -0.85
NFKB1-203ENST00000502367 NUCKS1Q9H1E3 243 aaKnown RBP9.73□□□□□ -0.85
NFKB1-203ENST00000502367 SCHIP1Q9P0W5 487 aaPredicted RBP9.73□□□□□ -0.85
NFKB1-203ENST00000502367 A0A1B0GTH6 734 aa9.72□□□□□ -0.85
NFKB1-203ENST00000502367 TXLNAP40222 546 aa9.72□□□□□ -0.85
NFKB1-203ENST00000502367 SLC9A9Q8IVB4 645 aa9.72□□□□□ -0.85
NFKB1-203ENST00000502367 NIFKQ9BYG3 293 aaKnown RBP9.72□□□□□ -0.85
NFKB1-203ENST00000502367 WRNQ14191 1432 aaPredicted RBP eCLIP9.72□□□□□ -0.85
NFKB1-203ENST00000502367 BACH1O14867 736 aa9.71□□□□□ -0.86
NFKB1-203ENST00000502367 ATP4AP20648 1035 aa9.71□□□□□ -0.86
NFKB1-203ENST00000502367 ATP1A2P50993 1020 aa9.71□□□□□ -0.86
NFKB1-203ENST00000502367 UBAP2LQ14157 1087 aaKnown RBP9.71□□□□□ -0.86
NFKB1-203ENST00000502367 LARGE2Q8N3Y3 721 aa9.71□□□□□ -0.86
NFKB1-203ENST00000502367 TSPAN10Q9H1Z9 355 aaPredicted RBP9.71□□□□□ -0.86
NFKB1-203ENST00000502367 FOXK2Q01167 660 aa9.7□□□□□ -0.86
NFKB1-203ENST00000502367 CFTRP13569 1480 aa9.7□□□□□ -0.86
NFKB1-203ENST00000502367 RUSC2Q8N2Y8 1516 aa9.7□□□□□ -0.86
NFKB1-203ENST00000502367 TOP2BQ02880 1626 aa9.7□□□□□ -0.86
NFKB1-203ENST00000502367 H7C1W4 665 aa9.69□□□□□ -0.86
NFKB1-203ENST00000502367 SOGA1O94964 1423 aa9.69□□□□□ -0.86
NFKB1-203ENST00000502367 DPYDQ12882 1025 aa9.69□□□□□ -0.86
NFKB1-203ENST00000502367 PTK7Q13308 1070 aa9.69□□□□□ -0.86
NFKB1-203ENST00000502367 L3MBTL2Q969R5 705 aa9.69□□□□□ -0.86
NFKB1-203ENST00000502367 VRTNQ9H8Y1 702 aa9.69□□□□□ -0.86
NFKB1-203ENST00000502367 HCN2Q9UL51 889 aa9.69□□□□□ -0.86
NFKB1-203ENST00000502367 SIX5Q8N196 739 aa9.68□□□□□ -0.86
NFKB1-203ENST00000502367 C21orf2O43822 256 aa9.67□□□□□ -0.86
NFKB1-203ENST00000502367 ADAMTS2O95450 1211 aa9.67□□□□□ -0.86
NFKB1-203ENST00000502367 NOS2P35228 1153 aa9.67□□□□□ -0.86
NFKB1-203ENST00000502367 ARSJQ5FYB0 599 aaPredicted RBP9.67□□□□□ -0.86
NFKB1-203ENST00000502367 LARP1Q6PKG0 1096 aaKnown RBP9.67□□□□□ -0.86
NFKB1-203ENST00000502367 HCN4Q9Y3Q4 1203 aa9.67□□□□□ -0.86
NFKB1-203ENST00000502367 USP17L15C9J2P7 530 aa9.66□□□□□ -0.86
NFKB1-203ENST00000502367 USP17L10C9JJH3 530 aa9.66□□□□□ -0.86
NFKB1-203ENST00000502367 USP17L13C9JLJ4 530 aa9.66□□□□□ -0.86
NFKB1-203ENST00000502367 USP17L12C9JPN9 530 aa9.66□□□□□ -0.86
NFKB1-203ENST00000502367 USP17L11C9JVI0 530 aa9.66□□□□□ -0.86
NFKB1-203ENST00000502367 USP17L21D6R901 530 aa9.66□□□□□ -0.86
NFKB1-203ENST00000502367 USP17L18D6R9N7 530 aa9.66□□□□□ -0.86
NFKB1-203ENST00000502367 USP17L22D6RA61 530 aa9.66□□□□□ -0.86
NFKB1-203ENST00000502367 USP17L17D6RBQ6 530 aa9.66□□□□□ -0.86
NFKB1-203ENST00000502367 USP17L19D6RCP7 530 aa9.66□□□□□ -0.86
NFKB1-203ENST00000502367 USP17L20D6RJB6 530 aa9.66□□□□□ -0.86
NFKB1-203ENST00000502367 CSB-PGBD3P0DP91 1061 aa9.66□□□□□ -0.86
NFKB1-203ENST00000502367 USP17L24Q0WX57 530 aa9.66□□□□□ -0.86
NFKB1-203ENST00000502367 LYPD4Q6UWN0 246 aa9.66□□□□□ -0.86
NFKB1-203ENST00000502367 FAM9AQ8IZU1 332 aaPredicted RBP9.66□□□□□ -0.86
NFKB1-203ENST00000502367 PGBD3Q8N328 593 aa9.66□□□□□ -0.86
NFKB1-203ENST00000502367 ABHD17AQ96GS6 310 aa9.66□□□□□ -0.86
NFKB1-203ENST00000502367 ZIC5Q96T25 663 aa9.66□□□□□ -0.86
NFKB1-203ENST00000502367 HINFPQ9BQA5 517 aa9.66□□□□□ -0.86
NFKB1-203ENST00000502367 ZNF232Q9UNY5 417 aa9.66□□□□□ -0.86
NFKB1-203ENST00000502367 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.65□□□□□ -0.86
NFKB1-203ENST00000502367 A0A1W2PNR3 127 aa9.65□□□□□ -0.86
NFKB1-203ENST00000502367 BNIP3LO60238 219 aa9.65□□□□□ -0.86
NFKB1-203ENST00000502367 ZNF385CQ66K41 422 aaPredicted RBP9.65□□□□□ -0.86
NFKB1-203ENST00000502367 CHMP7Q8WUX9 453 aaPredicted RBP9.65□□□□□ -0.86
NFKB1-203ENST00000502367 ARXQ96QS3 562 aa9.65□□□□□ -0.86
NFKB1-203ENST00000502367 ZCCHC2Q9C0B9 1178 aaKnown RBP9.65□□□□□ -0.86
NFKB1-203ENST00000502367 CUX1P39880 1505 aa9.65□□□□□ -0.86
NFKB1-203ENST00000502367 SEC13P55735 322 aa9.64□□□□□ -0.87
NFKB1-203ENST00000502367 FOXR1Q6PIV2 292 aa9.64□□□□□ -0.87
NFKB1-203ENST00000502367 ANKMY2Q8IV38 441 aa9.64□□□□□ -0.87
NFKB1-203ENST00000502367 GMCL1Q96IK5 515 aa9.64□□□□□ -0.87
NFKB1-203ENST00000502367 C1orf115Q9H7X2 142 aa9.64□□□□□ -0.87
NFKB1-203ENST00000502367 STK17AQ9UEE5 414 aa9.64□□□□□ -0.87
NFKB1-203ENST00000502367 EEA1Q15075 1411 aa9.64□□□□□ -0.87
NFKB1-203ENST00000502367 IGF1RP08069 1367 aa9.63□□□□□ -0.87
NFKB1-203ENST00000502367 SLURP2P0DP57 97 aa9.63□□□□□ -0.87
NFKB1-203ENST00000502367 CTBSQ01459 385 aa9.63□□□□□ -0.87
NFKB1-203ENST00000502367 TEAD4Q15561 434 aa9.63□□□□□ -0.87
NFKB1-203ENST00000502367 C7orf43Q8WVR3 580 aa9.63□□□□□ -0.87
NFKB1-203ENST00000502367 SCG3Q8WXD2 468 aaKnown RBP9.63□□□□□ -0.87
NFKB1-203ENST00000502367 TRERF1Q96PN7 1200 aa9.63□□□□□ -0.87
NFKB1-203ENST00000502367 CRISPLD1Q9H336 500 aa9.63□□□□□ -0.87
NFKB1-203ENST00000502367 RBM19Q9Y4C8 960 aaKnown RBP9.63□□□□□ -0.87
NFKB1-203ENST00000502367 ATAD2Q6PL18 1390 aa9.63□□□□□ -0.87
NFKB1-203ENST00000502367 SERTM1A2A2V5 107 aa9.62□□□□□ -0.87
NFKB1-203ENST00000502367 DCDC2BA2VCK2 349 aa9.62□□□□□ -0.87
NFKB1-203ENST00000502367 EML1O00423 815 aa9.62□□□□□ -0.87
NFKB1-203ENST00000502367 C2CD2LO14523 706 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms