RNA–Protein interactions for RNA: ENST00000502316.5

RNF4-202, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-202ENST00000502316 INTS5Q6P9B9 1019 aaKnown RBP18.45■□□□□ 0.54
RNF4-202ENST00000502316 TFCP2L1Q9NZI6 479 aa18.45■□□□□ 0.54
RNF4-202ENST00000502316 PNPLA7Q6ZV29 1317 aa18.45■□□□□ 0.54
RNF4-202ENST00000502316 PSDA5PKW4 1024 aaPredicted RBP18.44■□□□□ 0.54
RNF4-202ENST00000502316 SSFA2P28290 1259 aa18.44■□□□□ 0.54
RNF4-202ENST00000502316 AMIGO3Q86WK7 504 aa18.44■□□□□ 0.54
RNF4-202ENST00000502316 CCDC87Q9NVE4 849 aa18.44■□□□□ 0.54
RNF4-202ENST00000502316 USP16Q9Y5T5 823 aa18.44■□□□□ 0.54
RNF4-202ENST00000502316 GNPATO15228 680 aa18.43■□□□□ 0.54
RNF4-202ENST00000502316 RPS6KA4O75676 772 aa18.42■□□□□ 0.54
RNF4-202ENST00000502316 HOXB7P09629 217 aa18.42■□□□□ 0.54
RNF4-202ENST00000502316 FLAD1Q8NFF5 587 aa18.42■□□□□ 0.54
RNF4-202ENST00000502316 SPINK5Q9NQ38 1064 aaPredicted RBP18.42■□□□□ 0.54
RNF4-202ENST00000502316 ZBTB1Q9Y2K1 713 aa18.42■□□□□ 0.54
RNF4-202ENST00000502316 ADRA2BP18089 450 aa18.41■□□□□ 0.54
RNF4-202ENST00000502316 KRT24Q2M2I5 525 aa18.41■□□□□ 0.54
RNF4-202ENST00000502316 TSR2Q969E8 191 aaKnown RBP18.41■□□□□ 0.54
RNF4-202ENST00000502316 RTCBQ9Y3I0 505 aaKnown RBP18.41■□□□□ 0.54
RNF4-202ENST00000502316 FANCIQ9NVI1 1328 aa18.41■□□□□ 0.54
RNF4-202ENST00000502316 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.4■□□□□ 0.54
RNF4-202ENST00000502316 GOLGA2Q08379 1002 aa18.4■□□□□ 0.54
RNF4-202ENST00000502316 PDGFDQ9GZP0 370 aaPredicted RBP18.4■□□□□ 0.54
RNF4-202ENST00000502316 SOS1Q07889 1333 aaPredicted RBP18.4■□□□□ 0.54
RNF4-202ENST00000502316 A1BGP04217 495 aa18.39■□□□□ 0.53
RNF4-202ENST00000502316 HNRNPUQ00839 825 aaKnown RBP eCLIP18.39■□□□□ 0.53
RNF4-202ENST00000502316 COL23A1Q86Y22 540 aaPredicted RBP18.39■□□□□ 0.53
RNF4-202ENST00000502316 MYH16Q9H6N6 1097 aa18.39■□□□□ 0.53
RNF4-202ENST00000502316 C4AP0C0L4 1744 aa18.38■□□□□ 0.53
RNF4-202ENST00000502316 IL6STP40189 918 aaPredicted RBP18.38■□□□□ 0.53
RNF4-202ENST00000502316 EIF5P55010 431 aaKnown RBP18.38■□□□□ 0.53
RNF4-202ENST00000502316 DUSP27Q5VZP5 1158 aa18.38■□□□□ 0.53
RNF4-202ENST00000502316 SMIM5Q71RC9 77 aa18.38■□□□□ 0.53
RNF4-202ENST00000502316 ERBB4Q15303 1308 aa18.38■□□□□ 0.53
RNF4-202ENST00000502316 E9PSI1 815 aa18.37■□□□□ 0.53
RNF4-202ENST00000502316 PHF14O94880 888 aa18.37■□□□□ 0.53
RNF4-202ENST00000502316 TRAPPC3LQ5T215 181 aa18.37■□□□□ 0.53
RNF4-202ENST00000502316 C8orf58Q8NAV2 365 aa18.37■□□□□ 0.53
RNF4-202ENST00000502316 SLC16A10Q8TF71 515 aa18.37■□□□□ 0.53
RNF4-202ENST00000502316 COL15A1P39059 1388 aa18.37■□□□□ 0.53
RNF4-202ENST00000502316 NBPF26B4DH59 902 aa18.36■□□□□ 0.53
RNF4-202ENST00000502316 CANXP27824 592 aaKnown RBP18.36■□□□□ 0.53
RNF4-202ENST00000502316 SLFN5Q08AF3 891 aa18.36■□□□□ 0.53
RNF4-202ENST00000502316 NBPF10Q6P3W6 841 aaKnown RBP18.36■□□□□ 0.53
RNF4-202ENST00000502316 NBPF15Q8N660 670 aa18.36■□□□□ 0.53
RNF4-202ENST00000502316 ARHGEF1Q92888 912 aaKnown RBP18.36■□□□□ 0.53
RNF4-202ENST00000502316 ZBED9Q6R2W3 1325 aa18.35■□□□□ 0.53
RNF4-202ENST00000502316 TRMT2AQ8IZ69 625 aaKnown RBP18.35■□□□□ 0.53
RNF4-202ENST00000502316 TSPYL6Q8N831 410 aa18.35■□□□□ 0.53
RNF4-202ENST00000502316 COL24A1Q17RW2 1714 aa18.35■□□□□ 0.53
RNF4-202ENST00000502316 EIF2S2P20042 333 aaKnown RBP18.34■□□□□ 0.53
RNF4-202ENST00000502316 PDIA6Q15084 440 aa18.34■□□□□ 0.53
RNF4-202ENST00000502316 HDGFL1Q5TGJ6 251 aa18.34■□□□□ 0.53
RNF4-202ENST00000502316 USP42Q9H9J4 1324 aaKnown RBP18.33■□□□□ 0.53
RNF4-202ENST00000502316 PIP4K2AP48426 406 aaPredicted RBP18.33■□□□□ 0.52
RNF4-202ENST00000502316 LRP10Q7Z4F1 713 aa18.33■□□□□ 0.52
RNF4-202ENST00000502316 CDCA7LQ96GN5 454 aa18.33■□□□□ 0.52
RNF4-202ENST00000502316 MTFR1LQ9H019 292 aa18.33■□□□□ 0.52
RNF4-202ENST00000502316 A0A087WZG4 1122 aa18.32■□□□□ 0.52
RNF4-202ENST00000502316 ELL2O00472 640 aaPredicted RBP18.32■□□□□ 0.52
RNF4-202ENST00000502316 RFC4P35249 363 aa18.32■□□□□ 0.52
RNF4-202ENST00000502316 EXOSC9Q06265 439 aaKnown RBP18.32■□□□□ 0.52
RNF4-202ENST00000502316 TWISTNBQ3B726 338 aaPredicted RBP18.32■□□□□ 0.52
RNF4-202ENST00000502316 CHMP4AQ9BY43 222 aa18.32■□□□□ 0.52
RNF4-202ENST00000502316 SCN7AQ01118 1682 aa18.31■□□□□ 0.52
RNF4-202ENST00000502316 MSH5O43196 834 aa18.31■□□□□ 0.52
RNF4-202ENST00000502316 ZBTB7AO95365 584 aa18.31■□□□□ 0.52
RNF4-202ENST00000502316 DDX21Q9NR30 783 aaKnown RBP eCLIP18.31■□□□□ 0.52
RNF4-202ENST00000502316 NARFQ9UHQ1 456 aa18.31■□□□□ 0.52
RNF4-202ENST00000502316 GYS1P13807 737 aa18.3■□□□□ 0.52
RNF4-202ENST00000502316 NECTIN2Q92692 538 aa18.3■□□□□ 0.52
RNF4-202ENST00000502316 CHPF2Q9P2E5 772 aa18.3■□□□□ 0.52
RNF4-202ENST00000502316 DBF4Q9UBU7 674 aaPredicted RBP18.3■□□□□ 0.52
RNF4-202ENST00000502316 LRP5O75197 1615 aa18.3■□□□□ 0.52
RNF4-202ENST00000502316 BCORQ6W2J9 1755 aa18.3■□□□□ 0.52
RNF4-202ENST00000502316 VAMP4O75379 141 aa18.29■□□□□ 0.52
RNF4-202ENST00000502316 PROSER3Q2NL68 480 aa18.29■□□□□ 0.52
RNF4-202ENST00000502316 NPM2Q86SE8 214 aaKnown RBP18.29■□□□□ 0.52
RNF4-202ENST00000502316 SGIP1Q9BQI5 828 aa18.29■□□□□ 0.52
RNF4-202ENST00000502316 SRP68Q9UHB9 627 aaKnown RBP18.29■□□□□ 0.52
RNF4-202ENST00000502316 ZNF330Q9Y3S2 320 aaPredicted RBP18.29■□□□□ 0.52
RNF4-202ENST00000502316 RGL2O15211 777 aa18.28■□□□□ 0.52
RNF4-202ENST00000502316 ZPR1O75312 459 aa18.28■□□□□ 0.52
RNF4-202ENST00000502316 MYL6BP14649 208 aa18.28■□□□□ 0.52
RNF4-202ENST00000502316 CCDC30Q5VVM6 783 aa18.28■□□□□ 0.52
RNF4-202ENST00000502316 DZIP3Q86Y13 1208 aaKnown RBP18.28■□□□□ 0.52
RNF4-202ENST00000502316 SPON1Q9HCB6 807 aa18.28■□□□□ 0.52
RNF4-202ENST00000502316 CAMTA2O94983 1202 aa18.27■□□□□ 0.52
RNF4-202ENST00000502316 ANXA1P04083 346 aa18.27■□□□□ 0.52
RNF4-202ENST00000502316 PTGER2P43116 358 aa18.27■□□□□ 0.52
RNF4-202ENST00000502316 USPL1Q5W0Q7 1092 aa18.27■□□□□ 0.52
RNF4-202ENST00000502316 TBC1D2BQ9UPU7 963 aa18.27■□□□□ 0.52
RNF4-202ENST00000502316 NLGN1Q8N2Q7 840 aa18.26■□□□□ 0.51
RNF4-202ENST00000502316 BCL2L12Q9HB09 334 aa18.26■□□□□ 0.51
RNF4-202ENST00000502316 HYPKQ9NX55 129 aa18.26■□□□□ 0.51
RNF4-202ENST00000502316 ATF5Q9Y2D1 282 aaPredicted RBP18.26■□□□□ 0.51
RNF4-202ENST00000502316 FKBP8Q14318 412 aa18.25■□□□□ 0.51
RNF4-202ENST00000502316 MSL1Q68DK7 614 aa18.25■□□□□ 0.51
RNF4-202ENST00000502316 TTLL7Q6ZT98 887 aa18.25■□□□□ 0.51
RNF4-202ENST00000502316 ERVV-1B6SEH8 477 aa18.24■□□□□ 0.51
RNF4-202ENST00000502316 CT47B1P0C2W7 299 aaPredicted RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms