RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 CCDC87Q9NVE4 849 aa21.06■□□□□ 0.96
LMNA-217ENST00000498722 TRIM35Q9UPQ4 493 aa21.05■□□□□ 0.96
LMNA-217ENST00000498722 LAS1LQ9Y4W2 734 aaKnown RBP21.05■□□□□ 0.96
LMNA-217ENST00000498722 GTF3C3Q9Y5Q9 886 aa21.05■□□□□ 0.96
LMNA-217ENST00000498722 COL24A1Q17RW2 1714 aa21.05■□□□□ 0.96
LMNA-217ENST00000498722 STARD3NLO95772 234 aa21.04■□□□□ 0.96
LMNA-217ENST00000498722 CYP19A1P11511 503 aaPredicted RBP21.04■□□□□ 0.96
LMNA-217ENST00000498722 TRAPPC3LQ5T215 181 aa21.04■□□□□ 0.96
LMNA-217ENST00000498722 MSL1Q68DK7 614 aa21.04■□□□□ 0.96
LMNA-217ENST00000498722 TSPYL4Q9UJ04 414 aa21.04■□□□□ 0.96
LMNA-217ENST00000498722 RPS6KA4O75676 772 aa21.04■□□□□ 0.96
LMNA-217ENST00000498722 TEX13AQ9BXU3 409 aaPredicted RBP21.04■□□□□ 0.96
LMNA-217ENST00000498722 SNRPA1P09661 255 aaKnown RBP21.02■□□□□ 0.95
LMNA-217ENST00000498722 CANXP27824 592 aaKnown RBP21.02■□□□□ 0.95
LMNA-217ENST00000498722 POLD1P28340 1107 aa21.02■□□□□ 0.95
LMNA-217ENST00000498722 RFC4P35249 363 aa21.02■□□□□ 0.95
LMNA-217ENST00000498722 INTS5Q6P9B9 1019 aaKnown RBP21.02■□□□□ 0.95
LMNA-217ENST00000498722 ZNF330Q9Y3S2 320 aaPredicted RBP21.02■□□□□ 0.95
LMNA-217ENST00000498722 ADRA2BP18089 450 aa21.01■□□□□ 0.95
LMNA-217ENST00000498722 ZBTB1Q9Y2K1 713 aa21.01■□□□□ 0.95
LMNA-217ENST00000498722 PRAMEF22A3QJZ6 481 aa21■□□□□ 0.95
LMNA-217ENST00000498722 PTGER2P43116 358 aa21■□□□□ 0.95
LMNA-217ENST00000498722 ARHGEF1Q92888 912 aaKnown RBP21■□□□□ 0.95
LMNA-217ENST00000498722 SALL2Q9Y467 1007 aaPredicted RBP20.99■□□□□ 0.95
LMNA-217ENST00000498722 COL15A1P39059 1388 aa20.98■□□□□ 0.95
LMNA-217ENST00000498722 EIF4A1P60842 406 aaKnown RBP20.98■□□□□ 0.95
LMNA-217ENST00000498722 CALD1Q05682 793 aaKnown RBP20.98■□□□□ 0.95
LMNA-217ENST00000498722 NPM2Q86SE8 214 aaKnown RBP20.98■□□□□ 0.95
LMNA-217ENST00000498722 USP16Q9Y5T5 823 aa20.98■□□□□ 0.95
LMNA-217ENST00000498722 SOS1Q07889 1333 aaPredicted RBP20.97■□□□□ 0.95
LMNA-217ENST00000498722 KLHL34Q8N239 644 aa20.97■□□□□ 0.95
LMNA-217ENST00000498722 NGEFQ8N5V2 710 aa20.97■□□□□ 0.95
LMNA-217ENST00000498722 BABAM1Q9NWV8 329 aa20.97■□□□□ 0.95
LMNA-217ENST00000498722 A1BGP04217 495 aa20.96■□□□□ 0.95
LMNA-217ENST00000498722 ARXQ96QS3 562 aa20.96■□□□□ 0.95
LMNA-217ENST00000498722 ZPR1O75312 459 aa20.95■□□□□ 0.94
LMNA-217ENST00000498722 PIP4K2AP48426 406 aaPredicted RBP20.95■□□□□ 0.94
LMNA-217ENST00000498722 SGIP1Q9BQI5 828 aa20.95■□□□□ 0.94
LMNA-217ENST00000498722 CHL1O00533 1208 aa20.94■□□□□ 0.94
LMNA-217ENST00000498722 GIGYF1O75420 1035 aaPredicted RBP20.94■□□□□ 0.94
LMNA-217ENST00000498722 CFAP44Q96MT7 982 aa20.94■□□□□ 0.94
LMNA-217ENST00000498722 SRP68Q9UHB9 627 aaKnown RBP20.94■□□□□ 0.94
LMNA-217ENST00000498722 SCN7AQ01118 1682 aa20.93■□□□□ 0.94
LMNA-217ENST00000498722 USP42Q9H9J4 1324 aaKnown RBP20.93■□□□□ 0.94
LMNA-217ENST00000498722 BCORQ6W2J9 1755 aa20.92■□□□□ 0.94
LMNA-217ENST00000498722 GNAI1P63096 354 aa20.92■□□□□ 0.94
LMNA-217ENST00000498722 A0A087WZG4 1122 aa20.91■□□□□ 0.94
LMNA-217ENST00000498722 GYS1P13807 737 aa20.91■□□□□ 0.94
LMNA-217ENST00000498722 IL6STP40189 918 aaPredicted RBP20.91■□□□□ 0.94
LMNA-217ENST00000498722 WWC1Q8IX03 1113 aa20.91■□□□□ 0.94
LMNA-217ENST00000498722 NLGN1Q8N2Q7 840 aa20.91■□□□□ 0.94
LMNA-217ENST00000498722 MBIPQ9NS73 344 aa20.91■□□□□ 0.94
LMNA-217ENST00000498722 IFT57Q9NWB7 429 aa20.91■□□□□ 0.94
LMNA-217ENST00000498722 EIF2S2P20042 333 aaKnown RBP20.9■□□□□ 0.94
LMNA-217ENST00000498722 EIF5P55010 431 aaKnown RBP20.9■□□□□ 0.94
LMNA-217ENST00000498722 CCDC27Q2M243 656 aa20.9■□□□□ 0.94
LMNA-217ENST00000498722 USPL1Q5W0Q7 1092 aa20.9■□□□□ 0.94
LMNA-217ENST00000498722 FHDC1Q9C0D6 1143 aaPredicted RBP20.9■□□□□ 0.94
LMNA-217ENST00000498722 MMP10P09238 476 aa20.89■□□□□ 0.93
LMNA-217ENST00000498722 KRT24Q2M2I5 525 aa20.89■□□□□ 0.93
LMNA-217ENST00000498722 NARFQ9UHQ1 456 aa20.89■□□□□ 0.93
LMNA-217ENST00000498722 TBC1D2BQ9UPU7 963 aa20.89■□□□□ 0.93
LMNA-217ENST00000498722 NEFLP07196 543 aa20.88■□□□□ 0.93
LMNA-217ENST00000498722 NECTIN2Q92692 538 aa20.88■□□□□ 0.93
LMNA-217ENST00000498722 AFDNP55196 1824 aaKnown RBP20.88■□□□□ 0.93
LMNA-217ENST00000498722 NUP98P52948 1817 aa20.87■□□□□ 0.93
LMNA-217ENST00000498722 MYL6BP14649 208 aa20.87■□□□□ 0.93
LMNA-217ENST00000498722 FKBP8Q14318 412 aa20.87■□□□□ 0.93
LMNA-217ENST00000498722 NBPF26B4DH59 902 aa20.86■□□□□ 0.93
LMNA-217ENST00000498722 ZNF853P0CG23 659 aa20.86■□□□□ 0.93
LMNA-217ENST00000498722 NCBP3Q53F19 620 aaKnown RBP20.86■□□□□ 0.93
LMNA-217ENST00000498722 NBPF10Q6P3W6 841 aaKnown RBP20.86■□□□□ 0.93
LMNA-217ENST00000498722 DZIP3Q86Y13 1208 aaKnown RBP20.86■□□□□ 0.93
LMNA-217ENST00000498722 NBPF15Q8N660 670 aa20.86■□□□□ 0.93
LMNA-217ENST00000498722 PARP3Q9Y6F1 533 aa20.85■□□□□ 0.93
LMNA-217ENST00000498722 DUSP27Q5VZP5 1158 aa20.84■□□□□ 0.93
LMNA-217ENST00000498722 TSR2Q969E8 191 aaKnown RBP20.84■□□□□ 0.93
LMNA-217ENST00000498722 ELL2O00472 640 aaPredicted RBP20.83■□□□□ 0.93
LMNA-217ENST00000498722 BICDL1Q6ZP65 573 aa20.83■□□□□ 0.93
LMNA-217ENST00000498722 SYT17Q9BSW7 474 aa20.83■□□□□ 0.93
LMNA-217ENST00000498722 KIF13BQ9NQT8 1826 aa20.83■□□□□ 0.92
LMNA-217ENST00000498722 HDGFL1Q5TGJ6 251 aa20.82■□□□□ 0.92
LMNA-217ENST00000498722 WDR63Q8IWG1 891 aa20.82■□□□□ 0.92
LMNA-217ENST00000498722 N4BP2Q86UW6 1770 aaPredicted RBP20.82■□□□□ 0.92
LMNA-217ENST00000498722 IL16Q14005 1332 aa20.82■□□□□ 0.92
LMNA-217ENST00000498722 ERBB4Q15303 1308 aa20.82■□□□□ 0.92
LMNA-217ENST00000498722 ZNF521Q96K83 1311 aa20.82■□□□□ 0.92
LMNA-217ENST00000498722 BCL2L12Q9HB09 334 aa20.81■□□□□ 0.92
LMNA-217ENST00000498722 SUPT16HQ9Y5B9 1047 aaKnown RBP20.81■□□□□ 0.92
LMNA-217ENST00000498722 ANXA1P04083 346 aa20.8■□□□□ 0.92
LMNA-217ENST00000498722 HOXB7P09629 217 aa20.8■□□□□ 0.92
LMNA-217ENST00000498722 KIF6Q6ZMV9 814 aa20.8■□□□□ 0.92
LMNA-217ENST00000498722 CAMTA2O94983 1202 aa20.79■□□□□ 0.92
LMNA-217ENST00000498722 GOLGA2Q08379 1002 aa20.79■□□□□ 0.92
LMNA-217ENST00000498722 NFIXQ14938 502 aa20.79■□□□□ 0.92
LMNA-217ENST00000498722 ZNF652Q9Y2D9 606 aa20.79■□□□□ 0.92
LMNA-217ENST00000498722 CACNA1FO60840 1977 aa20.79■□□□□ 0.92
LMNA-217ENST00000498722 DDR1Q08345 913 aa20.78■□□□□ 0.92
LMNA-217ENST00000498722 PROSER3Q2NL68 480 aa20.78■□□□□ 0.92
LMNA-217ENST00000498722 C8orf58Q8NAV2 365 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms