RNA–Protein interactions for RNA: ENST00000498396.2

SLFN11-206, Transcript of schlafen family member 11, humanhuman

TSL 3

Gene SLFN11, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLFN11-206ENST00000498396 CCDC87Q9NVE4 849 aa18.08■□□□□ 0.48
SLFN11-206ENST00000498396 KDM3BQ7LBC6 1761 aa18.08■□□□□ 0.48
SLFN11-206ENST00000498396 ARHGEF1Q92888 912 aaKnown RBP18.07■□□□□ 0.48
SLFN11-206ENST00000498396 RTCBQ9Y3I0 505 aaKnown RBP18.07■□□□□ 0.48
SLFN11-206ENST00000498396 PIP4K2AP48426 406 aaPredicted RBP18.06■□□□□ 0.48
SLFN11-206ENST00000498396 FAM9BQ8IZU0 186 aa18.06■□□□□ 0.48
SLFN11-206ENST00000498396 SRP68Q9UHB9 627 aaKnown RBP18.06■□□□□ 0.48
SLFN11-206ENST00000498396 USP16Q9Y5T5 823 aa18.06■□□□□ 0.48
SLFN11-206ENST00000498396 SOS1Q07889 1333 aaPredicted RBP18.05■□□□□ 0.48
SLFN11-206ENST00000498396 EIF4A1P60842 406 aaKnown RBP18.05■□□□□ 0.48
SLFN11-206ENST00000498396 LMOD3Q0VAK6 560 aa18.05■□□□□ 0.48
SLFN11-206ENST00000498396 FLAD1Q8NFF5 587 aa18.05■□□□□ 0.48
SLFN11-206ENST00000498396 SLC16A10Q8TF71 515 aa18.05■□□□□ 0.48
SLFN11-206ENST00000498396 C4AP0C0L4 1744 aa18.04■□□□□ 0.48
SLFN11-206ENST00000498396 A1BGP04217 495 aa18.04■□□□□ 0.48
SLFN11-206ENST00000498396 CANXP27824 592 aaKnown RBP18.04■□□□□ 0.48
SLFN11-206ENST00000498396 CACNB1Q02641 598 aaPredicted RBP18.04■□□□□ 0.48
SLFN11-206ENST00000498396 TRAPPC3LQ5T215 181 aa18.04■□□□□ 0.48
SLFN11-206ENST00000498396 TSPYL4Q9UJ04 414 aa18.04■□□□□ 0.48
SLFN11-206ENST00000498396 COL24A1Q17RW2 1714 aa18.03■□□□□ 0.48
SLFN11-206ENST00000498396 KRT24Q2M2I5 525 aa18.03■□□□□ 0.48
SLFN11-206ENST00000498396 RNF216Q9NWF9 866 aaPredicted RBP18.03■□□□□ 0.48
SLFN11-206ENST00000498396 SNRPA1P09661 255 aaKnown RBP18.02■□□□□ 0.48
SLFN11-206ENST00000498396 DIEXFQ68CQ4 756 aaKnown RBP18.02■□□□□ 0.48
SLFN11-206ENST00000498396 PPP1R1BQ9UD71 204 aaPredicted RBP18.02■□□□□ 0.48
SLFN11-206ENST00000498396 LAS1LQ9Y4W2 734 aaKnown RBP18.02■□□□□ 0.48
SLFN11-206ENST00000498396 STARD3NLO95772 234 aa18.01■□□□□ 0.47
SLFN11-206ENST00000498396 HMGB2P26583 209 aaKnown RBP18.01■□□□□ 0.47
SLFN11-206ENST00000498396 GOLGB1Q14789 3259 aaKnown RBP18.01■□□□□ 0.47
SLFN11-206ENST00000498396 COL15A1P39059 1388 aa18.01■□□□□ 0.47
SLFN11-206ENST00000498396 NBPF26B4DH59 902 aa18■□□□□ 0.47
SLFN11-206ENST00000498396 CHL1O00533 1208 aa18■□□□□ 0.47
SLFN11-206ENST00000498396 GIGYF1O75420 1035 aaPredicted RBP18■□□□□ 0.47
SLFN11-206ENST00000498396 GYS1P13807 737 aa18■□□□□ 0.47
SLFN11-206ENST00000498396 RFC4P35249 363 aa18■□□□□ 0.47
SLFN11-206ENST00000498396 NBPF10Q6P3W6 841 aaKnown RBP18■□□□□ 0.47
SLFN11-206ENST00000498396 NBPF15Q8N660 670 aa18■□□□□ 0.47
SLFN11-206ENST00000498396 ARXQ96QS3 562 aa18■□□□□ 0.47
SLFN11-206ENST00000498396 SALL2Q9Y467 1007 aaPredicted RBP18■□□□□ 0.47
SLFN11-206ENST00000498396 USP42Q9H9J4 1324 aaKnown RBP17.99■□□□□ 0.47
SLFN11-206ENST00000498396 EIF5P55010 431 aaKnown RBP17.99■□□□□ 0.47
SLFN11-206ENST00000498396 MIER1Q8N108 512 aa17.99■□□□□ 0.47
SLFN11-206ENST00000498396 FHDC1Q9C0D6 1143 aaPredicted RBP17.99■□□□□ 0.47
SLFN11-206ENST00000498396 ZNF330Q9Y3S2 320 aaPredicted RBP17.99■□□□□ 0.47
SLFN11-206ENST00000498396 UTRNP46939 3433 aa17.98■□□□□ 0.47
SLFN11-206ENST00000498396 ZNF853P0CG23 659 aa17.98■□□□□ 0.47
SLFN11-206ENST00000498396 POLD1P28340 1107 aa17.98■□□□□ 0.47
SLFN11-206ENST00000498396 FKBP8Q14318 412 aa17.98■□□□□ 0.47
SLFN11-206ENST00000498396 TEX13AQ9BXU3 409 aaPredicted RBP17.98■□□□□ 0.47
SLFN11-206ENST00000498396 BCL2L12Q9HB09 334 aa17.98■□□□□ 0.47
SLFN11-206ENST00000498396 MBIPQ9NS73 344 aa17.98■□□□□ 0.47
SLFN11-206ENST00000498396 USPL1Q5W0Q7 1092 aa17.97■□□□□ 0.47
SLFN11-206ENST00000498396 MMP10P09238 476 aa17.96■□□□□ 0.47
SLFN11-206ENST00000498396 WWC1Q8IX03 1113 aa17.96■□□□□ 0.47
SLFN11-206ENST00000498396 KLHL34Q8N239 644 aa17.96■□□□□ 0.47
SLFN11-206ENST00000498396 CFAP44Q96MT7 982 aa17.96■□□□□ 0.47
SLFN11-206ENST00000498396 LAMB4A4D0S4 1761 aa17.96■□□□□ 0.47
SLFN11-206ENST00000498396 IL6STP40189 918 aaPredicted RBP17.95■□□□□ 0.46
SLFN11-206ENST00000498396 BABAM1Q9NWV8 329 aa17.95■□□□□ 0.46
SLFN11-206ENST00000498396 TBC1D2BQ9UPU7 963 aa17.95■□□□□ 0.46
SLFN11-206ENST00000498396 CCER2I3L3R5 266 aa17.94■□□□□ 0.46
SLFN11-206ENST00000498396 DDR1Q08345 913 aa17.94■□□□□ 0.46
SLFN11-206ENST00000498396 NLGN2Q8NFZ4 835 aa17.94■□□□□ 0.46
SLFN11-206ENST00000498396 NECTIN2Q92692 538 aa17.94■□□□□ 0.46
SLFN11-206ENST00000498396 TSR2Q969E8 191 aaKnown RBP17.94■□□□□ 0.46
SLFN11-206ENST00000498396 SYT17Q9BSW7 474 aa17.94■□□□□ 0.46
SLFN11-206ENST00000498396 IFT57Q9NWB7 429 aa17.94■□□□□ 0.46
SLFN11-206ENST00000498396 NARFQ9UHQ1 456 aa17.94■□□□□ 0.46
SLFN11-206ENST00000498396 ANXA1P04083 346 aa17.93■□□□□ 0.46
SLFN11-206ENST00000498396 CCDC27Q2M243 656 aa17.93■□□□□ 0.46
SLFN11-206ENST00000498396 PROSER3Q2NL68 480 aa17.93■□□□□ 0.46
SLFN11-206ENST00000498396 ZPR1O75312 459 aa17.92■□□□□ 0.46
SLFN11-206ENST00000498396 CAMTA2O94983 1202 aa17.92■□□□□ 0.46
SLFN11-206ENST00000498396 EIF2S2P20042 333 aaKnown RBP17.92■□□□□ 0.46
SLFN11-206ENST00000498396 NLGN1Q8N2Q7 840 aa17.92■□□□□ 0.46
SLFN11-206ENST00000498396 SCN7AQ01118 1682 aa17.91■□□□□ 0.46
SLFN11-206ENST00000498396 MYL6BP14649 208 aa17.91■□□□□ 0.46
SLFN11-206ENST00000498396 GNAI1P63096 354 aa17.91■□□□□ 0.46
SLFN11-206ENST00000498396 PDIA6Q15084 440 aa17.91■□□□□ 0.46
SLFN11-206ENST00000498396 NGEFQ8N5V2 710 aa17.91■□□□□ 0.46
SLFN11-206ENST00000498396 SPINK5Q9NQ38 1064 aaPredicted RBP17.91■□□□□ 0.46
SLFN11-206ENST00000498396 NFIXQ14938 502 aa17.9■□□□□ 0.46
SLFN11-206ENST00000498396 LRP10Q7Z4F1 713 aa17.9■□□□□ 0.46
SLFN11-206ENST00000498396 DZIP3Q86Y13 1208 aaKnown RBP17.9■□□□□ 0.46
SLFN11-206ENST00000498396 C8orf58Q8NAV2 365 aa17.9■□□□□ 0.46
SLFN11-206ENST00000498396 ELL2O00472 640 aaPredicted RBP17.89■□□□□ 0.45
SLFN11-206ENST00000498396 TM4SF1P30408 202 aa17.89■□□□□ 0.45
SLFN11-206ENST00000498396 TTLL7Q6ZT98 887 aa17.89■□□□□ 0.45
SLFN11-206ENST00000498396 A0A087WZG4 1122 aa17.88■□□□□ 0.45
SLFN11-206ENST00000498396 POLRMTO00411 1230 aaKnown RBP17.88■□□□□ 0.45
SLFN11-206ENST00000498396 CALD1Q05682 793 aaKnown RBP17.88■□□□□ 0.45
SLFN11-206ENST00000498396 DUSP27Q5VZP5 1158 aa17.88■□□□□ 0.45
SLFN11-206ENST00000498396 TBC1D9BQ66K14 1250 aa17.88■□□□□ 0.45
SLFN11-206ENST00000498396 BICDL1Q6ZP65 573 aa17.88■□□□□ 0.45
SLFN11-206ENST00000498396 TSPYL6Q8N831 410 aa17.88■□□□□ 0.45
SLFN11-206ENST00000498396 BCORQ6W2J9 1755 aa17.87■□□□□ 0.45
SLFN11-206ENST00000498396 NCBP3Q53F19 620 aaKnown RBP17.87■□□□□ 0.45
SLFN11-206ENST00000498396 C10orf71Q711Q0 1435 aa17.87■□□□□ 0.45
SLFN11-206ENST00000498396 HLFQ16534 295 aa17.86■□□□□ 0.45
SLFN11-206ENST00000498396 CHPF2Q9P2E5 772 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms