RNA–Protein interactions for RNA: ENST00000498284.1

PTPRK-215, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 524 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-215ENST00000498284 C4orf17Q53FE4 359 aa8.33□□□□□ -1.08
PTPRK-215ENST00000498284 NBPF10Q6P3W6 841 aaKnown RBP8.33□□□□□ -1.08
PTPRK-215ENST00000498284 ATP2B4P23634 1241 aa8.32□□□□□ -1.08
PTPRK-215ENST00000498284 PHKA2P46019 1235 aa8.32□□□□□ -1.08
PTPRK-215ENST00000498284 TEAD4Q15561 434 aa8.32□□□□□ -1.08
PTPRK-215ENST00000498284 WDR44Q5JSH3 913 aa8.32□□□□□ -1.08
PTPRK-215ENST00000498284 NOS2P35228 1153 aa8.31□□□□□ -1.08
PTPRK-215ENST00000498284 PLA2G4AP47712 749 aa8.31□□□□□ -1.08
PTPRK-215ENST00000498284 ZDHHC1Q8WTX9 485 aa8.31□□□□□ -1.08
PTPRK-215ENST00000498284 CHMP7Q8WUX9 453 aaPredicted RBP8.31□□□□□ -1.08
PTPRK-215ENST00000498284 CXXC1Q9P0U4 656 aaPredicted RBP8.31□□□□□ -1.08
PTPRK-215ENST00000498284 CHMP3Q9Y3E7 222 aa8.31□□□□□ -1.08
PTPRK-215ENST00000498284 PARP3Q9Y6F1 533 aa8.31□□□□□ -1.08
PTPRK-215ENST00000498284 SERTM1A2A2V5 107 aa8.3□□□□□ -1.08
PTPRK-215ENST00000498284 PDIA4P13667 645 aaKnown RBP8.3□□□□□ -1.08
PTPRK-215ENST00000498284 SSFA2P28290 1259 aa8.3□□□□□ -1.08
PTPRK-215ENST00000498284 STAG2Q8N3U4 1231 aa8.3□□□□□ -1.08
PTPRK-215ENST00000498284 L3MBTL2Q969R5 705 aa8.3□□□□□ -1.08
PTPRK-215ENST00000498284 C2orf49Q9BVC5 232 aaPredicted RBP8.3□□□□□ -1.08
PTPRK-215ENST00000498284 TRAIPQ9BWF2 469 aa8.3□□□□□ -1.08
PTPRK-215ENST00000498284 ZNF232Q9UNY5 417 aa8.3□□□□□ -1.08
PTPRK-215ENST00000498284 EML1O00423 815 aa8.29□□□□□ -1.08
PTPRK-215ENST00000498284 FOXO3O43524 673 aa8.29□□□□□ -1.08
PTPRK-215ENST00000498284 FKBP5Q13451 457 aaPredicted RBP8.29□□□□□ -1.08
PTPRK-215ENST00000498284 TIMMDC1Q9NPL8 285 aa8.29□□□□□ -1.08
PTPRK-215ENST00000498284 PTSQ03393 145 aa8.28□□□□□ -1.08
PTPRK-215ENST00000498284 SH3PXD2AQ5TCZ1 1133 aa8.28□□□□□ -1.08
PTPRK-215ENST00000498284 B4GALNT3Q6L9W6 998 aa8.28□□□□□ -1.08
PTPRK-215ENST00000498284 PHLDB3Q6NSJ2 640 aa8.28□□□□□ -1.08
PTPRK-215ENST00000498284 POTEAQ6S8J7 498 aa8.28□□□□□ -1.08
PTPRK-215ENST00000498284 AIDAQ96BJ3 306 aa8.28□□□□□ -1.08
PTPRK-215ENST00000498284 SENP3-EIF4A1A0A087X0R7 540 aa8.27□□□□□ -1.09
PTPRK-215ENST00000498284 HIRAP54198 1017 aaPredicted RBP8.27□□□□□ -1.09
PTPRK-215ENST00000498284 NFX1Q12986 1120 aaKnown RBP8.27□□□□□ -1.09
PTPRK-215ENST00000498284 NBPF1Q3BBV0 1214 aa8.27□□□□□ -1.09
PTPRK-215ENST00000498284 C1orf216Q8TAB5 229 aa8.27□□□□□ -1.09
PTPRK-215ENST00000498284 VTI1AQ96AJ9 217 aa8.27□□□□□ -1.09
PTPRK-215ENST00000498284 DYRK1BQ9Y463 629 aa8.27□□□□□ -1.09
PTPRK-215ENST00000498284 A0A1B0GTH6 734 aa8.26□□□□□ -1.09
PTPRK-215ENST00000498284 SLC35F4A4IF30 521 aa8.26□□□□□ -1.09
PTPRK-215ENST00000498284 TXLNAP40222 546 aa8.26□□□□□ -1.09
PTPRK-215ENST00000498284 LCE2CQ5TA81 110 aa8.26□□□□□ -1.09
PTPRK-215ENST00000498284 HCN4Q9Y3Q4 1203 aa8.26□□□□□ -1.09
PTPRK-215ENST00000498284 BRD1O95696 1058 aa8.25□□□□□ -1.09
PTPRK-215ENST00000498284 MSX1P28360 303 aa8.25□□□□□ -1.09
PTPRK-215ENST00000498284 MKNK1Q9BUB5 465 aa8.25□□□□□ -1.09
PTPRK-215ENST00000498284 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.25□□□□□ -1.09
PTPRK-215ENST00000498284 ZDHHC3Q9NYG2 299 aa8.25□□□□□ -1.09
PTPRK-215ENST00000498284 PTCD1O75127 700 aaKnown RBP8.24□□□□□ -1.09
PTPRK-215ENST00000498284 WFS1O76024 890 aa8.24□□□□□ -1.09
PTPRK-215ENST00000498284 F11P03951 625 aa8.24□□□□□ -1.09
PTPRK-215ENST00000498284 TATP17735 454 aaPredicted RBP8.24□□□□□ -1.09
PTPRK-215ENST00000498284 SCNN1AP37088 669 aa8.24□□□□□ -1.09
PTPRK-215ENST00000498284 CCDC155Q8N6L0 562 aa8.24□□□□□ -1.09
PTPRK-215ENST00000498284 COL26A1Q96A83 441 aa8.24□□□□□ -1.09
PTPRK-215ENST00000498284 NGLY1Q96IV0 654 aa8.24□□□□□ -1.09
PTPRK-215ENST00000498284 GAS2L1Q99501 681 aaPredicted RBP8.24□□□□□ -1.09
PTPRK-215ENST00000498284 PHACTR1Q9C0D0 580 aa8.24□□□□□ -1.09
PTPRK-215ENST00000498284 GPAMQ9HCL2 828 aa8.24□□□□□ -1.09
PTPRK-215ENST00000498284 C1orf53Q5VUE5 145 aa8.23□□□□□ -1.09
PTPRK-215ENST00000498284 CAPN12Q6ZSI9 719 aa8.23□□□□□ -1.09
PTPRK-215ENST00000498284 ALDH16A1Q8IZ83 802 aa8.23□□□□□ -1.09
PTPRK-215ENST00000498284 ATP4AP20648 1035 aa8.22□□□□□ -1.09
PTPRK-215ENST00000498284 ARID4AP29374 1257 aaPredicted RBP8.21□□□□□ -1.1
PTPRK-215ENST00000498284 NAA30Q147X3 362 aaPredicted RBP8.21□□□□□ -1.1
PTPRK-215ENST00000498284 RIPOR1Q6ZS17 1223 aa8.21□□□□□ -1.1
PTPRK-215ENST00000498284 C7orf43Q8WVR3 580 aa8.21□□□□□ -1.1
PTPRK-215ENST00000498284 QTRT2Q9H974 415 aaKnown RBP8.21□□□□□ -1.1
PTPRK-215ENST00000498284 SEPT3Q9UH03 358 aa8.21□□□□□ -1.1
PTPRK-215ENST00000498284 WIPF1O43516 503 aa8.2□□□□□ -1.1
PTPRK-215ENST00000498284 PPFIA3O75145 1194 aa8.2□□□□□ -1.1
PTPRK-215ENST00000498284 RTN1Q16799 776 aa8.2□□□□□ -1.1
PTPRK-215ENST00000498284 ARSJQ5FYB0 599 aaPredicted RBP8.2□□□□□ -1.1
PTPRK-215ENST00000498284 BICDL1Q6ZP65 573 aa8.2□□□□□ -1.1
PTPRK-215ENST00000498284 PGBD3Q8N328 593 aa8.2□□□□□ -1.1
PTPRK-215ENST00000498284 RHPN1Q8TCX5 695 aa8.2□□□□□ -1.1
PTPRK-215ENST00000498284 ZIC5Q96T25 663 aa8.2□□□□□ -1.1
PTPRK-215ENST00000498284 RUBCNLQ9H714 662 aa8.2□□□□□ -1.1
PTPRK-215ENST00000498284 MTMR7Q9Y216 660 aa8.2□□□□□ -1.1
PTPRK-215ENST00000498284 ITGA6P23229 1130 aa8.19□□□□□ -1.1
PTPRK-215ENST00000498284 C16orf46Q6P387 395 aa8.19□□□□□ -1.1
PTPRK-215ENST00000498284 MYO19Q96H55 970 aa8.19□□□□□ -1.1
PTPRK-215ENST00000498284 SAP130Q9H0E3 1048 aa8.19□□□□□ -1.1
PTPRK-215ENST00000498284 CRISPLD1Q9H336 500 aa8.19□□□□□ -1.1
PTPRK-215ENST00000498284 CUEDC1Q9NWM3 386 aaPredicted RBP8.19□□□□□ -1.1
PTPRK-215ENST00000498284 GPC6Q9Y625 555 aaPredicted RBP8.19□□□□□ -1.1
PTPRK-215ENST00000498284 A0A1W2PNR3 127 aa8.18□□□□□ -1.1
PTPRK-215ENST00000498284 KCNA1Q09470 495 aa8.18□□□□□ -1.1
PTPRK-215ENST00000498284 COX20Q5RI15 118 aa8.18□□□□□ -1.1
PTPRK-215ENST00000498284 TXNDC2Q86VQ3 553 aa8.18□□□□□ -1.1
PTPRK-215ENST00000498284 AEBP1Q8IUX7 1158 aa8.18□□□□□ -1.1
PTPRK-215ENST00000498284 KCTD17Q8N5Z5 321 aa8.18□□□□□ -1.1
PTPRK-215ENST00000498284 NXF1Q9UBU9 619 aaKnown RBP8.18□□□□□ -1.1
PTPRK-215ENST00000498284 H7C1W4 665 aa8.17□□□□□ -1.1
PTPRK-215ENST00000498284 DBN1Q16643 649 aa8.17□□□□□ -1.1
PTPRK-215ENST00000498284 EFHC2Q5JST6 749 aa8.17□□□□□ -1.1
PTPRK-215ENST00000498284 TRIM22Q8IYM9 498 aa8.17□□□□□ -1.1
PTPRK-215ENST00000498284 CCER1Q8TC90 406 aaPredicted RBP8.17□□□□□ -1.1
PTPRK-215ENST00000498284 GTF3C2Q8WUA4 911 aaPredicted RBP8.17□□□□□ -1.1
PTPRK-215ENST00000498284 KLRG1Q96E93 195 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms