RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 GTF2E1P29083 439 aaPredicted RBP8.7□□□□□ -1.02
VPS36-206ENST00000497149 PSMA6P60900 246 aaKnown RBP8.7□□□□□ -1.02
VPS36-206ENST00000497149 ZNF295-AS1Q8N0V1 137 aa8.7□□□□□ -1.02
VPS36-206ENST00000497149 NBPF15Q8N660 670 aa8.7□□□□□ -1.02
VPS36-206ENST00000497149 CCER1Q8TC90 406 aaPredicted RBP8.7□□□□□ -1.02
VPS36-206ENST00000497149 C2orf49Q9BVC5 232 aaPredicted RBP8.7□□□□□ -1.02
VPS36-206ENST00000497149 TEAD4Q15561 434 aa8.69□□□□□ -1.02
VPS36-206ENST00000497149 ZFP42Q96MM3 310 aa8.69□□□□□ -1.02
VPS36-206ENST00000497149 NIFKQ9BYG3 293 aaKnown RBP8.69□□□□□ -1.02
VPS36-206ENST00000497149 CABP1Q9NZU7 370 aa8.69□□□□□ -1.02
VPS36-206ENST00000497149 IVNS1ABPQ9Y6Y0 642 aa8.69□□□□□ -1.02
VPS36-206ENST00000497149 TTLL8A6PVC2 850 aa8.68□□□□□ -1.02
VPS36-206ENST00000497149 PTCD1O75127 700 aaKnown RBP8.68□□□□□ -1.02
VPS36-206ENST00000497149 NOS2P35228 1153 aa8.68□□□□□ -1.02
VPS36-206ENST00000497149 POTEAQ6S8J7 498 aa8.68□□□□□ -1.02
VPS36-206ENST00000497149 CAPN12Q6ZSI9 719 aa8.68□□□□□ -1.02
VPS36-206ENST00000497149 RNF217Q8TC41 542 aa8.68□□□□□ -1.02
VPS36-206ENST00000497149 RHBDD1Q8TEB9 315 aa8.68□□□□□ -1.02
VPS36-206ENST00000497149 COL26A1Q96A83 441 aa8.68□□□□□ -1.02
VPS36-206ENST00000497149 MKNK1Q9BUB5 465 aa8.68□□□□□ -1.02
VPS36-206ENST00000497149 CHMP3Q9Y3E7 222 aa8.68□□□□□ -1.02
VPS36-206ENST00000497149 SERTM1A2A2V5 107 aa8.67□□□□□ -1.02
VPS36-206ENST00000497149 SPATA31C2B4DYI2 1134 aa8.67□□□□□ -1.02
VPS36-206ENST00000497149 SOS2Q07890 1332 aaPredicted RBP8.67□□□□□ -1.02
VPS36-206ENST00000497149 GNASQ5JWF2 1037 aa8.67□□□□□ -1.02
VPS36-206ENST00000497149 ZDHHC1Q8WTX9 485 aa8.67□□□□□ -1.02
VPS36-206ENST00000497149 L3MBTL2Q969R5 705 aa8.67□□□□□ -1.02
VPS36-206ENST00000497149 VTI1AQ96AJ9 217 aa8.67□□□□□ -1.02
VPS36-206ENST00000497149 SEPT3Q9UH03 358 aa8.67□□□□□ -1.02
VPS36-206ENST00000497149 MTMR7Q9Y216 660 aa8.67□□□□□ -1.02
VPS36-206ENST00000497149 EML1O00423 815 aa8.66□□□□□ -1.02
VPS36-206ENST00000497149 C4orf17Q53FE4 359 aa8.66□□□□□ -1.02
VPS36-206ENST00000497149 LYSMD3Q7Z3D4 306 aa8.66□□□□□ -1.02
VPS36-206ENST00000497149 PRICKLE2Q7Z3G6 844 aa8.66□□□□□ -1.02
VPS36-206ENST00000497149 GZF1Q9H116 711 aaPredicted RBP8.66□□□□□ -1.02
VPS36-206ENST00000497149 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.66□□□□□ -1.02
VPS36-206ENST00000497149 ZNF232Q9UNY5 417 aa8.66□□□□□ -1.02
VPS36-206ENST00000497149 PARP3Q9Y6F1 533 aa8.66□□□□□ -1.02
VPS36-206ENST00000497149 HIRAP54198 1017 aaPredicted RBP8.65□□□□□ -1.02
VPS36-206ENST00000497149 POU4F2Q12837 409 aa8.65□□□□□ -1.02
VPS36-206ENST00000497149 NAA30Q147X3 362 aaPredicted RBP8.65□□□□□ -1.02
VPS36-206ENST00000497149 SH3PXD2AQ5TCZ1 1133 aa8.65□□□□□ -1.02
VPS36-206ENST00000497149 FIGNL2A6NMB9 653 aa8.64□□□□□ -1.03
VPS36-206ENST00000497149 SERPINB4P48594 390 aa8.64□□□□□ -1.03
VPS36-206ENST00000497149 WDR44Q5JSH3 913 aa8.64□□□□□ -1.03
VPS36-206ENST00000497149 NBPF10Q6P3W6 841 aaKnown RBP8.64□□□□□ -1.03
VPS36-206ENST00000497149 GTF3C2Q8WUA4 911 aaPredicted RBP8.64□□□□□ -1.03
VPS36-206ENST00000497149 HCN4Q9Y3Q4 1203 aa8.64□□□□□ -1.03
VPS36-206ENST00000497149 PHKA2P46019 1235 aa8.63□□□□□ -1.03
VPS36-206ENST00000497149 NFX1Q12986 1120 aaKnown RBP8.63□□□□□ -1.03
VPS36-206ENST00000497149 WIPF1O43516 503 aa8.62□□□□□ -1.03
VPS36-206ENST00000497149 WFS1O76024 890 aa8.62□□□□□ -1.03
VPS36-206ENST00000497149 PLA2G4AP47712 749 aa8.62□□□□□ -1.03
VPS36-206ENST00000497149 ALDH16A1Q8IZ83 802 aa8.62□□□□□ -1.03
VPS36-206ENST00000497149 DNMT3LQ9UJW3 386 aa8.62□□□□□ -1.03
VPS36-206ENST00000497149 ABL1P00519 1130 aa8.61□□□□□ -1.03
VPS36-206ENST00000497149 RHOQP17081 205 aa8.61□□□□□ -1.03
VPS36-206ENST00000497149 C16orf46Q6P387 395 aa8.61□□□□□ -1.03
VPS36-206ENST00000497149 AIDAQ96BJ3 306 aa8.61□□□□□ -1.03
VPS36-206ENST00000497149 NGLY1Q96IV0 654 aa8.61□□□□□ -1.03
VPS36-206ENST00000497149 SAP130Q9H0E3 1048 aa8.61□□□□□ -1.03
VPS36-206ENST00000497149 QTRT2Q9H974 415 aaKnown RBP8.61□□□□□ -1.03
VPS36-206ENST00000497149 PODXL2Q9NZ53 605 aa8.61□□□□□ -1.03
VPS36-206ENST00000497149 EGFL7Q9UHF1 273 aa8.61□□□□□ -1.03
VPS36-206ENST00000497149 DNMT3AQ9Y6K1 912 aaPredicted RBP8.61□□□□□ -1.03
VPS36-206ENST00000497149 SOWAHDA6NJG2 315 aa8.6□□□□□ -1.03
VPS36-206ENST00000497149 SNRPBP14678 240 aaKnown RBP8.6□□□□□ -1.03
VPS36-206ENST00000497149 TXLNAP40222 546 aa8.6□□□□□ -1.03
VPS36-206ENST00000497149 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.6□□□□□ -1.03
VPS36-206ENST00000497149 COX20Q5RI15 118 aa8.6□□□□□ -1.03
VPS36-206ENST00000497149 C1orf53Q5VUE5 145 aa8.6□□□□□ -1.03
VPS36-206ENST00000497149 NPAS3Q8IXF0 933 aa8.6□□□□□ -1.03
VPS36-206ENST00000497149 PHACTR1Q9C0D0 580 aa8.6□□□□□ -1.03
VPS36-206ENST00000497149 MAN1A2O60476 641 aa8.59□□□□□ -1.03
VPS36-206ENST00000497149 FKBP4Q02790 459 aaKnown RBP eCLIP8.59□□□□□ -1.03
VPS36-206ENST00000497149 NBPF1Q3BBV0 1214 aa8.59□□□□□ -1.03
VPS36-206ENST00000497149 HELQQ8TDG4 1101 aa8.59□□□□□ -1.03
VPS36-206ENST00000497149 C7orf43Q8WVR3 580 aa8.59□□□□□ -1.03
VPS36-206ENST00000497149 MYO19Q96H55 970 aa8.59□□□□□ -1.03
VPS36-206ENST00000497149 TIMMDC1Q9NPL8 285 aa8.59□□□□□ -1.03
VPS36-206ENST00000497149 ANO2Q9NQ90 1003 aa8.59□□□□□ -1.03
VPS36-206ENST00000497149 ZDHHC3Q9NYG2 299 aa8.59□□□□□ -1.03
VPS36-206ENST00000497149 LRFN2Q9ULH4 789 aa8.59□□□□□ -1.03
VPS36-206ENST00000497149 ICMTO60725 284 aa8.58□□□□□ -1.04
VPS36-206ENST00000497149 ZNF211Q13398 564 aaPredicted RBP8.58□□□□□ -1.04
VPS36-206ENST00000497149 SF3B2Q13435 895 aaKnown RBP8.58□□□□□ -1.04
VPS36-206ENST00000497149 RTN1Q16799 776 aa8.58□□□□□ -1.04
VPS36-206ENST00000497149 SND1Q7KZF4 910 aaKnown RBP eCLIP8.58□□□□□ -1.04
VPS36-206ENST00000497149 A0A1B0GTH6 734 aa8.57□□□□□ -1.04
VPS36-206ENST00000497149 TERTO14746 1132 aaKnown RBP8.57□□□□□ -1.04
VPS36-206ENST00000497149 MTMR3Q13615 1198 aa8.57□□□□□ -1.04
VPS36-206ENST00000497149 SOBPA7XYQ1 873 aa8.56□□□□□ -1.04
VPS36-206ENST00000497149 TATP17735 454 aaPredicted RBP8.56□□□□□ -1.04
VPS36-206ENST00000497149 C11orf91Q3C1V1 193 aa8.56□□□□□ -1.04
VPS36-206ENST00000497149 DYRK1BQ9Y463 629 aa8.56□□□□□ -1.04
VPS36-206ENST00000497149 H3BRB1 525 aa8.55□□□□□ -1.04
VPS36-206ENST00000497149 TNFRSF10BO14763 440 aa8.55□□□□□ -1.04
VPS36-206ENST00000497149 NPR3P17342 541 aa8.55□□□□□ -1.04
VPS36-206ENST00000497149 ATP4AP20648 1035 aa8.55□□□□□ -1.04
VPS36-206ENST00000497149 MSX1P28360 303 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms