RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 GPRASP1Q5JY77 1395 aa9.55□□□□□ -0.88
CRNKL1-205ENST00000496549 GOLGA6L7A0A1B0GV03 622 aa9.55□□□□□ -0.88
CRNKL1-205ENST00000496549 INPP5BP32019 993 aa9.55□□□□□ -0.88
CRNKL1-205ENST00000496549 CCDC70Q6NSX1 233 aa9.55□□□□□ -0.88
CRNKL1-205ENST00000496549 RNF217Q8TC41 542 aa9.55□□□□□ -0.88
CRNKL1-205ENST00000496549 TMX3Q96JJ7 454 aa9.55□□□□□ -0.88
CRNKL1-205ENST00000496549 LRRCC1Q9C099 1032 aa9.55□□□□□ -0.88
CRNKL1-205ENST00000496549 DNAI1Q9UI46 699 aa9.55□□□□□ -0.88
CRNKL1-205ENST00000496549 ATAD2Q6PL18 1390 aa9.55□□□□□ -0.88
CRNKL1-205ENST00000496549 SRGAP3O43295 1099 aa9.55□□□□□ -0.88
CRNKL1-205ENST00000496549 U2AF1L5P0DN76 240 aaPredicted RBP9.55□□□□□ -0.88
CRNKL1-205ENST00000496549 U2AF1Q01081 240 aaKnown RBP eCLIP9.55□□□□□ -0.88
CRNKL1-205ENST00000496549 LRMPQ12912 555 aa9.55□□□□□ -0.88
CRNKL1-205ENST00000496549 PKP1Q13835 747 aa9.55□□□□□ -0.88
CRNKL1-205ENST00000496549 FAM43BQ6ZT52 329 aaPredicted RBP9.55□□□□□ -0.88
CRNKL1-205ENST00000496549 TMCO5BA8MYB1 307 aa9.55□□□□□ -0.88
CRNKL1-205ENST00000496549 ZSCAN12O43309 604 aa9.55□□□□□ -0.88
CRNKL1-205ENST00000496549 CD2BP2O95400 341 aaKnown RBP9.55□□□□□ -0.88
CRNKL1-205ENST00000496549 SUGP1Q8IWZ8 645 aaKnown RBP9.55□□□□□ -0.88
CRNKL1-205ENST00000496549 CEP112Q8N8E3 955 aa9.55□□□□□ -0.88
CRNKL1-205ENST00000496549 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.55□□□□□ -0.882e-6■■■□□ 15.9
CRNKL1-205ENST00000496549 KIAA0586Q9BVV6 1533 aa9.55□□□□□ -0.88
CRNKL1-205ENST00000496549 HMMRO75330 724 aa9.54□□□□□ -0.88
CRNKL1-205ENST00000496549 EVCP57679 992 aa9.54□□□□□ -0.88
CRNKL1-205ENST00000496549 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.54□□□□□ -0.88
CRNKL1-205ENST00000496549 CEP57Q86XR8 500 aa9.54□□□□□ -0.88
CRNKL1-205ENST00000496549 FAM177A1Q8N128 213 aaPredicted RBP9.54□□□□□ -0.88
CRNKL1-205ENST00000496549 CCDC69A6NI79 296 aa9.54□□□□□ -0.88
CRNKL1-205ENST00000496549 TSPY4P0CV99 314 aa9.54□□□□□ -0.88
CRNKL1-205ENST00000496549 TSPY10P0CW01 314 aa9.54□□□□□ -0.88
CRNKL1-205ENST00000496549 CAMK4Q16566 473 aa9.54□□□□□ -0.88
CRNKL1-205ENST00000496549 HDXQ7Z353 690 aa9.54□□□□□ -0.88
CRNKL1-205ENST00000496549 SLC24A3Q9HC58 644 aa9.54□□□□□ -0.88
CRNKL1-205ENST00000496549 ADAM21Q9UKJ8 722 aa9.54□□□□□ -0.88
CRNKL1-205ENST00000496549 CASKIN1Q8WXD9 1431 aa9.54□□□□□ -0.88
CRNKL1-205ENST00000496549 RLBP1P12271 317 aa9.54□□□□□ -0.88
CRNKL1-205ENST00000496549 SEMA3FQ13275 785 aa9.54□□□□□ -0.88
CRNKL1-205ENST00000496549 CCDC150Q8NCX0 1101 aa9.54□□□□□ -0.88
CRNKL1-205ENST00000496549 RSRC1Q96IZ7 334 aaKnown RBP9.54□□□□□ -0.88
CRNKL1-205ENST00000496549 TYRO3Q06418 890 aa9.53□□□□□ -0.88
CRNKL1-205ENST00000496549 DDX19AQ9NUU7 478 aaKnown RBP9.53□□□□□ -0.88
CRNKL1-205ENST00000496549 IRAK4Q9NWZ3 460 aa9.53□□□□□ -0.88
CRNKL1-205ENST00000496549 GOLGA6L10A6NI86 522 aa9.53□□□□□ -0.88
CRNKL1-205ENST00000496549 ZNF75DP51815 510 aa9.53□□□□□ -0.88
CRNKL1-205ENST00000496549 CCDC73Q6ZRK6 1079 aa9.53□□□□□ -0.88
CRNKL1-205ENST00000496549 TCP11L2Q8N4U5 519 aa9.53□□□□□ -0.88
CRNKL1-205ENST00000496549 OTUD6BQ8N6M0 293 aa9.53□□□□□ -0.88
CRNKL1-205ENST00000496549 N4BP2L2Q92802 583 aaPredicted RBP9.53□□□□□ -0.88
CRNKL1-205ENST00000496549 INTS4Q96HW7 963 aaKnown RBP9.53□□□□□ -0.88
CRNKL1-205ENST00000496549 JPH2Q9BR39 696 aaPredicted RBP9.53□□□□□ -0.88
CRNKL1-205ENST00000496549 BRD1O95696 1058 aa9.53□□□□□ -0.88
CRNKL1-205ENST00000496549 LIG3P49916 1009 aa9.53□□□□□ -0.88
CRNKL1-205ENST00000496549 ANO6Q4KMQ2 910 aa9.53□□□□□ -0.88
CRNKL1-205ENST00000496549 CCDC158Q5M9N0 1113 aa9.53□□□□□ -0.88
CRNKL1-205ENST00000496549 SWT1Q5T5J6 900 aaKnown RBP9.53□□□□□ -0.88
CRNKL1-205ENST00000496549 LUZP1Q86V48 1076 aa9.53□□□□□ -0.88
CRNKL1-205ENST00000496549 GOLGA1Q92805 767 aa9.53□□□□□ -0.88
CRNKL1-205ENST00000496549 SH3GL3Q99963 347 aa9.53□□□□□ -0.88
CRNKL1-205ENST00000496549 GNL3LQ9NVN8 582 aaKnown RBP9.53□□□□□ -0.88
CRNKL1-205ENST00000496549 CARMIL2Q6F5E8 1435 aa9.53□□□□□ -0.88
CRNKL1-205ENST00000496549 RBM6P78332 1123 aaKnown RBP9.52□□□□□ -0.88
CRNKL1-205ENST00000496549 CKAP2LQ8IYA6 745 aa9.52□□□□□ -0.88
CRNKL1-205ENST00000496549 CEP57L1Q8IYX8 460 aa9.52□□□□□ -0.88
CRNKL1-205ENST00000496549 RPUSD2Q8IZ73 545 aaKnown RBP9.52□□□□□ -0.88
CRNKL1-205ENST00000496549 ODF2LQ9ULJ1 636 aa9.52□□□□□ -0.88
CRNKL1-205ENST00000496549 CNPY2Q9Y2B0 182 aa9.52□□□□□ -0.88
CRNKL1-205ENST00000496549 MAP9Q49MG5 647 aa9.52□□□□□ -0.89
CRNKL1-205ENST00000496549 CRACR2AQ9BSW2 395 aa9.52□□□□□ -0.89
CRNKL1-205ENST00000496549 PSD3Q9NYI0 1048 aa9.52□□□□□ -0.89
CRNKL1-205ENST00000496549 NSFL1CQ9UNZ2 370 aaKnown RBP9.52□□□□□ -0.89
CRNKL1-205ENST00000496549 PDCP20941 246 aa9.52□□□□□ -0.89
CRNKL1-205ENST00000496549 WWC2Q6AWC2 1192 aa9.52□□□□□ -0.89
CRNKL1-205ENST00000496549 GOLGA6L9A6NEM1 432 aa9.51□□□□□ -0.89
CRNKL1-205ENST00000496549 GADD45BO75293 160 aaPredicted RBP9.51□□□□□ -0.89
CRNKL1-205ENST00000496549 GPR161Q8N6U8 529 aaKnown RBP9.51□□□□□ -0.89
CRNKL1-205ENST00000496549 CABS1Q96KC9 395 aa9.51□□□□□ -0.89
CRNKL1-205ENST00000496549 ST5P78524 1137 aa9.51□□□□□ -0.89
CRNKL1-205ENST00000496549 STK26Q9P289 416 aa9.51□□□□□ -0.89
CRNKL1-205ENST00000496549 NOB1Q9ULX3 412 aaKnown RBP9.51□□□□□ -0.89
CRNKL1-205ENST00000496549 NUP155O75694 1391 aa9.51□□□□□ -0.89
CRNKL1-205ENST00000496549 CUL7Q14999 1698 aa9.51□□□□□ -0.89
CRNKL1-205ENST00000496549 EFCAB8A8MWE9 144 aa9.51□□□□□ -0.89
CRNKL1-205ENST00000496549 NAP1L1P55209 391 aaKnown RBP9.51□□□□□ -0.89
CRNKL1-205ENST00000496549 PACS2Q86VP3 889 aa9.51□□□□□ -0.89
CRNKL1-205ENST00000496549 TMEM57Q8N5G2 664 aa9.51□□□□□ -0.89
CRNKL1-205ENST00000496549 DYDC1Q8WWB3 177 aa9.51□□□□□ -0.89
CRNKL1-205ENST00000496549 FAM210AQ96ND0 272 aa9.51□□□□□ -0.89
CRNKL1-205ENST00000496549 LRRFIP1Q32MZ4 808 aaKnown RBP9.51□□□□□ -0.89
CRNKL1-205ENST00000496549 ZNF513Q8N8E2 541 aaPredicted RBP9.51□□□□□ -0.89
CRNKL1-205ENST00000496549 RILPL2Q969X0 211 aa9.51□□□□□ -0.89
CRNKL1-205ENST00000496549 KCNF1Q9H3M0 494 aa9.51□□□□□ -0.89
CRNKL1-205ENST00000496549 KINO60870 393 aaKnown RBP9.5□□□□□ -0.89
CRNKL1-205ENST00000496549 ZSCAN22P10073 491 aaPredicted RBP9.5□□□□□ -0.89
CRNKL1-205ENST00000496549 TUBB4BP68371 445 aa9.5□□□□□ -0.89
CRNKL1-205ENST00000496549 DCTN1Q14203 1278 aa9.5□□□□□ -0.89
CRNKL1-205ENST00000496549 RNF187Q5TA31 235 aaPredicted RBP9.5□□□□□ -0.89
CRNKL1-205ENST00000496549 JMYQ8N9B5 988 aa9.5□□□□□ -0.89
CRNKL1-205ENST00000496549 ARMC2Q8NEN0 867 aa9.5□□□□□ -0.89
CRNKL1-205ENST00000496549 CTCFLQ8NI51 663 aaPredicted RBP9.5□□□□□ -0.89
CRNKL1-205ENST00000496549 AFAP1L1Q8TED9 768 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 548.1 ms