RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 CNTNAP4Q9C0A0 1308 aa23.68■■□□□ 1.38
TSSC4-210ENST00000496468 ELL2O00472 640 aaPredicted RBP23.68■■□□□ 1.38
TSSC4-210ENST00000496468 TSPYL6Q8N831 410 aa23.68■■□□□ 1.38
TSSC4-210ENST00000496468 CYP19A1P11511 503 aaPredicted RBP23.67■■□□□ 1.38
TSSC4-210ENST00000496468 HDGFL1Q5TGJ6 251 aa23.67■■□□□ 1.38
TSSC4-210ENST00000496468 TUBGCP6Q96RT7 1819 aa23.67■■□□□ 1.38
TSSC4-210ENST00000496468 CRKLP46109 303 aaKnown RBP23.66■■□□□ 1.38
TSSC4-210ENST00000496468 AK7Q96M32 723 aa23.66■■□□□ 1.38
TSSC4-210ENST00000496468 USP16Q9Y5T5 823 aa23.66■■□□□ 1.38
TSSC4-210ENST00000496468 UBR3Q6ZT12 1888 aa23.66■■□□□ 1.38
TSSC4-210ENST00000496468 MYH14Q7Z406 1995 aaKnown RBP23.65■■□□□ 1.38
TSSC4-210ENST00000496468 SOCS7O14512 581 aa23.65■■□□□ 1.38
TSSC4-210ENST00000496468 EIF2S2P20042 333 aaKnown RBP23.65■■□□□ 1.38
TSSC4-210ENST00000496468 CCDC87Q9NVE4 849 aa23.65■■□□□ 1.38
TSSC4-210ENST00000496468 QSER1Q2KHR3 1735 aa23.64■■□□□ 1.37
TSSC4-210ENST00000496468 ERBB4Q15303 1308 aa23.63■■□□□ 1.37
TSSC4-210ENST00000496468 NECTIN2Q92692 538 aa23.63■■□□□ 1.37
TSSC4-210ENST00000496468 CHMP4AQ9BY43 222 aa23.63■■□□□ 1.37
TSSC4-210ENST00000496468 ZBTB1Q9Y2K1 713 aa23.63■■□□□ 1.37
TSSC4-210ENST00000496468 ZNF827Q17R98 1081 aa23.62■■□□□ 1.37
TSSC4-210ENST00000496468 RC3H1Q5TC82 1133 aaKnown RBP23.62■■□□□ 1.37
TSSC4-210ENST00000496468 ANO8Q9HCE9 1232 aaPredicted RBP23.62■■□□□ 1.37
TSSC4-210ENST00000496468 GNPATO15228 680 aa23.61■■□□□ 1.37
TSSC4-210ENST00000496468 CT47B1P0C2W7 299 aaPredicted RBP23.61■■□□□ 1.37
TSSC4-210ENST00000496468 CCDC30Q5VVM6 783 aa23.61■■□□□ 1.37
TSSC4-210ENST00000496468 STK32BQ9NY57 414 aa23.61■■□□□ 1.37
TSSC4-210ENST00000496468 C4AP0C0L4 1744 aa23.6■■□□□ 1.37
TSSC4-210ENST00000496468 VAMP4O75379 141 aa23.6■■□□□ 1.37
TSSC4-210ENST00000496468 A1BGP04217 495 aa23.6■■□□□ 1.37
TSSC4-210ENST00000496468 INTS5Q6P9B9 1019 aaKnown RBP23.6■■□□□ 1.37
TSSC4-210ENST00000496468 AKT1S1Q96B36 256 aa23.6■■□□□ 1.37
TSSC4-210ENST00000496468 CANXP27824 592 aaKnown RBP23.59■■□□□ 1.37
TSSC4-210ENST00000496468 STK31Q9BXU1 1019 aa23.59■■□□□ 1.37
TSSC4-210ENST00000496468 CHPF2Q9P2E5 772 aa23.59■■□□□ 1.37
TSSC4-210ENST00000496468 COL15A1P39059 1388 aa23.58■■□□□ 1.37
TSSC4-210ENST00000496468 PIP4K2AP48426 406 aaPredicted RBP23.58■■□□□ 1.37
TSSC4-210ENST00000496468 NBPF14Q5TI25 921 aa23.58■■□□□ 1.37
TSSC4-210ENST00000496468 ZNF428Q96B54 188 aa23.58■■□□□ 1.37
TSSC4-210ENST00000496468 TFCP2L1Q9NZI6 479 aa23.57■■□□□ 1.36
TSSC4-210ENST00000496468 DBF4Q9UBU7 674 aaPredicted RBP23.57■■□□□ 1.36
TSSC4-210ENST00000496468 RTCBQ9Y3I0 505 aaKnown RBP23.57■■□□□ 1.36
TSSC4-210ENST00000496468 ZNF330Q9Y3S2 320 aaPredicted RBP23.57■■□□□ 1.36
TSSC4-210ENST00000496468 SCN7AQ01118 1682 aa23.57■■□□□ 1.36
TSSC4-210ENST00000496468 MYL6BP14649 208 aa23.56■■□□□ 1.36
TSSC4-210ENST00000496468 IL6STP40189 918 aaPredicted RBP23.56■■□□□ 1.36
TSSC4-210ENST00000496468 SLC15A2Q16348 729 aa23.56■■□□□ 1.36
TSSC4-210ENST00000496468 DDX21Q9NR30 783 aaKnown RBP eCLIP23.56■■□□□ 1.36
TSSC4-210ENST00000496468 CACNA1FO60840 1977 aa23.55■■□□□ 1.36
TSSC4-210ENST00000496468 NBPF26B4DH59 902 aa23.55■■□□□ 1.36
TSSC4-210ENST00000496468 RPS6KA4O75676 772 aa23.55■■□□□ 1.36
TSSC4-210ENST00000496468 PHF14O94880 888 aa23.55■■□□□ 1.36
TSSC4-210ENST00000496468 SSFA2P28290 1259 aa23.55■■□□□ 1.36
TSSC4-210ENST00000496468 PROSER3Q2NL68 480 aa23.55■■□□□ 1.36
TSSC4-210ENST00000496468 NBPF10Q6P3W6 841 aaKnown RBP23.55■■□□□ 1.36
TSSC4-210ENST00000496468 NPM2Q86SE8 214 aaKnown RBP23.55■■□□□ 1.36
TSSC4-210ENST00000496468 NBPF15Q8N660 670 aa23.55■■□□□ 1.36
TSSC4-210ENST00000496468 BCORQ6W2J9 1755 aa23.55■■□□□ 1.36
TSSC4-210ENST00000496468 TCERG1O14776 1098 aaKnown RBP23.54■■□□□ 1.36
TSSC4-210ENST00000496468 ANXA1P04083 346 aa23.54■■□□□ 1.36
TSSC4-210ENST00000496468 PDIA6Q15084 440 aa23.54■■□□□ 1.36
TSSC4-210ENST00000496468 ADRA2BP18089 450 aa23.53■■□□□ 1.36
TSSC4-210ENST00000496468 AMIGO3Q86WK7 504 aa23.53■■□□□ 1.36
TSSC4-210ENST00000496468 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.52■■□□□ 1.36
TSSC4-210ENST00000496468 EIF5P55010 431 aaKnown RBP23.52■■□□□ 1.36
TSSC4-210ENST00000496468 ALDH1L2Q3SY69 923 aa23.52■■□□□ 1.36
TSSC4-210ENST00000496468 SMC4Q9NTJ3 1288 aa23.52■■□□□ 1.36
TSSC4-210ENST00000496468 HYPKQ9NX55 129 aa23.52■■□□□ 1.36
TSSC4-210ENST00000496468 BCL2L13Q9BXK5 485 aa23.51■■□□□ 1.35
TSSC4-210ENST00000496468 PNPLA7Q6ZV29 1317 aa23.51■■□□□ 1.35
TSSC4-210ENST00000496468 CASZ1Q86V15 1759 aa23.5■■□□□ 1.35
TSSC4-210ENST00000496468 LRP10Q7Z4F1 713 aa23.5■■□□□ 1.35
TSSC4-210ENST00000496468 FLAD1Q8NFF5 587 aa23.5■■□□□ 1.35
TSSC4-210ENST00000496468 SSH1Q8WYL5 1049 aa23.5■■□□□ 1.35
TSSC4-210ENST00000496468 A0A087WZG4 1122 aa23.49■■□□□ 1.35
TSSC4-210ENST00000496468 SLC4A2P04920 1241 aa23.49■■□□□ 1.35
TSSC4-210ENST00000496468 RARSP54136 660 aaKnown RBP23.49■■□□□ 1.35
TSSC4-210ENST00000496468 SMIM5Q71RC9 77 aa23.49■■□□□ 1.35
TSSC4-210ENST00000496468 ARFGEF2Q9Y6D5 1785 aa23.48■■□□□ 1.35
TSSC4-210ENST00000496468 TRAPPC3LQ5T215 181 aa23.48■■□□□ 1.35
TSSC4-210ENST00000496468 KIF6Q6ZMV9 814 aa23.48■■□□□ 1.35
TSSC4-210ENST00000496468 XAGE3Q8WTP9 111 aa23.48■■□□□ 1.35
TSSC4-210ENST00000496468 RFC4P35249 363 aa23.47■■□□□ 1.35
TSSC4-210ENST00000496468 DZIP3Q86Y13 1208 aaKnown RBP23.47■■□□□ 1.35
TSSC4-210ENST00000496468 ARXQ96QS3 562 aa23.47■■□□□ 1.35
TSSC4-210ENST00000496468 MSH5O43196 834 aa23.46■■□□□ 1.35
TSSC4-210ENST00000496468 R3HDM1Q15032 1099 aaKnown RBP23.46■■□□□ 1.35
TSSC4-210ENST00000496468 MRPL50Q8N5N7 158 aaKnown RBP23.46■■□□□ 1.35
TSSC4-210ENST00000496468 ARHGEF1Q92888 912 aaKnown RBP23.46■■□□□ 1.35
TSSC4-210ENST00000496468 PHAXQ9H814 394 aaKnown RBP23.46■■□□□ 1.35
TSSC4-210ENST00000496468 KIF16BQ96L93 1317 aa23.45■■□□□ 1.34
TSSC4-210ENST00000496468 USP42Q9H9J4 1324 aaKnown RBP23.45■■□□□ 1.34
TSSC4-210ENST00000496468 AIMP1Q12904 312 aaKnown RBP23.45■■□□□ 1.34
TSSC4-210ENST00000496468 FLIIQ13045 1269 aa23.45■■□□□ 1.34
TSSC4-210ENST00000496468 COPS6Q7L5N1 327 aa23.45■■□□□ 1.34
TSSC4-210ENST00000496468 RCAN3Q9UKA8 241 aa23.45■■□□□ 1.34
TSSC4-210ENST00000496468 TTLL7Q6ZT98 887 aa23.44■■□□□ 1.34
TSSC4-210ENST00000496468 COL23A1Q86Y22 540 aaPredicted RBP23.44■■□□□ 1.34
TSSC4-210ENST00000496468 TBC1D2BQ9UPU7 963 aa23.44■■□□□ 1.34
TSSC4-210ENST00000496468 ANKRD36CQ5JPF3 1778 aa23.43■■□□□ 1.34
TSSC4-210ENST00000496468 MAP3K15Q6ZN16 1313 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms