RNA–Protein interactions for RNA: ENST00000496342.1

RHBDD3-207, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-207ENST00000496342 SOS1Q07889 1333 aaPredicted RBP23.21■■□□□ 1.31
RHBDD3-207ENST00000496342 RIPK4P57078 832 aa23.2■■□□□ 1.3
RHBDD3-207ENST00000496342 NEUROD2Q15784 382 aa23.2■■□□□ 1.3
RHBDD3-207ENST00000496342 COL15A1P39059 1388 aa23.19■■□□□ 1.3
RHBDD3-207ENST00000496342 ADRA2BP18089 450 aa23.19■■□□□ 1.3
RHBDD3-207ENST00000496342 CANXP27824 592 aaKnown RBP23.19■■□□□ 1.3
RHBDD3-207ENST00000496342 RFC4P35249 363 aa23.19■■□□□ 1.3
RHBDD3-207ENST00000496342 NLGN2Q8NFZ4 835 aa23.19■■□□□ 1.3
RHBDD3-207ENST00000496342 SCN7AQ01118 1682 aa23.19■■□□□ 1.3
RHBDD3-207ENST00000496342 GYS1P13807 737 aa23.18■■□□□ 1.3
RHBDD3-207ENST00000496342 TAF7Q15545 349 aaPredicted RBP23.18■■□□□ 1.3
RHBDD3-207ENST00000496342 RUNDC1Q96C34 613 aa23.18■■□□□ 1.3
RHBDD3-207ENST00000496342 USP42Q9H9J4 1324 aaKnown RBP23.17■■□□□ 1.3
RHBDD3-207ENST00000496342 PIP4K2AP48426 406 aaPredicted RBP23.17■■□□□ 1.3
RHBDD3-207ENST00000496342 AFDNP55196 1824 aaKnown RBP23.17■■□□□ 1.3
RHBDD3-207ENST00000496342 KIF13BQ9NQT8 1826 aa23.17■■□□□ 1.3
RHBDD3-207ENST00000496342 BCORQ6W2J9 1755 aa23.17■■□□□ 1.3
RHBDD3-207ENST00000496342 KIAA1551Q9HCM1 1747 aa23.16■■□□□ 1.3
RHBDD3-207ENST00000496342 ANP32CO43423 234 aa23.16■■□□□ 1.3
RHBDD3-207ENST00000496342 MMP10P09238 476 aa23.16■■□□□ 1.3
RHBDD3-207ENST00000496342 USP16Q9Y5T5 823 aa23.16■■□□□ 1.3
RHBDD3-207ENST00000496342 N4BP2Q86UW6 1770 aaPredicted RBP23.16■■□□□ 1.3
RHBDD3-207ENST00000496342 SENP3-EIF4A1A0A087X0R7 540 aa23.15■■□□□ 1.3
RHBDD3-207ENST00000496342 A1BGP04217 495 aa23.15■■□□□ 1.3
RHBDD3-207ENST00000496342 FKBP8Q14318 412 aa23.14■■□□□ 1.29
RHBDD3-207ENST00000496342 ZNF330Q9Y3S2 320 aaPredicted RBP23.14■■□□□ 1.29
RHBDD3-207ENST00000496342 STARD3NLO95772 234 aa23.13■■□□□ 1.29
RHBDD3-207ENST00000496342 USPL1Q5W0Q7 1092 aa23.13■■□□□ 1.29
RHBDD3-207ENST00000496342 TRIM35Q9UPQ4 493 aa23.13■■□□□ 1.29
RHBDD3-207ENST00000496342 MRS2Q9HD23 443 aa23.11■■□□□ 1.29
RHBDD3-207ENST00000496342 SNRPA1P09661 255 aaKnown RBP23.1■■□□□ 1.29
RHBDD3-207ENST00000496342 EIF5P55010 431 aaKnown RBP23.1■■□□□ 1.29
RHBDD3-207ENST00000496342 NLGN1Q8N2Q7 840 aa23.1■■□□□ 1.29
RHBDD3-207ENST00000496342 TEX13AQ9BXU3 409 aaPredicted RBP23.1■■□□□ 1.29
RHBDD3-207ENST00000496342 APAF1O14727 1248 aa23.09■■□□□ 1.29
RHBDD3-207ENST00000496342 EIF4A1P60842 406 aaKnown RBP23.09■■□□□ 1.29
RHBDD3-207ENST00000496342 DDR1Q08345 913 aa23.09■■□□□ 1.29
RHBDD3-207ENST00000496342 LMOD3Q0VAK6 560 aa23.09■■□□□ 1.29
RHBDD3-207ENST00000496342 BCL2L12Q9HB09 334 aa23.09■■□□□ 1.29
RHBDD3-207ENST00000496342 WWC3Q9ULE0 1092 aa23.09■■□□□ 1.29
RHBDD3-207ENST00000496342 ZPR1O75312 459 aa23.08■■□□□ 1.29
RHBDD3-207ENST00000496342 PELP1Q8IZL8 1130 aaKnown RBP23.08■■□□□ 1.29
RHBDD3-207ENST00000496342 PNISRQ8TF01 805 aaKnown RBP23.08■■□□□ 1.29
RHBDD3-207ENST00000496342 NARFQ9UHQ1 456 aa23.08■■□□□ 1.29
RHBDD3-207ENST00000496342 TSPYL4Q9UJ04 414 aa23.08■■□□□ 1.29
RHBDD3-207ENST00000496342 C10orf71Q711Q0 1435 aa23.08■■□□□ 1.28
RHBDD3-207ENST00000496342 TBC1D2BQ9UPU7 963 aa23.07■■□□□ 1.28
RHBDD3-207ENST00000496342 CHD4Q14839 1912 aa23.07■■□□□ 1.28
RHBDD3-207ENST00000496342 NRXN2Q9P2S2 1712 aa23.07■■□□□ 1.28
RHBDD3-207ENST00000496342 BRCA1P38398 1863 aaKnown RBP23.07■■□□□ 1.28
RHBDD3-207ENST00000496342 NBPF26B4DH59 902 aa23.06■■□□□ 1.28
RHBDD3-207ENST00000496342 NBPF10Q6P3W6 841 aaKnown RBP23.06■■□□□ 1.28
RHBDD3-207ENST00000496342 NBPF15Q8N660 670 aa23.06■■□□□ 1.28
RHBDD3-207ENST00000496342 GIGYF1O75420 1035 aaPredicted RBP23.05■■□□□ 1.28
RHBDD3-207ENST00000496342 IL6STP40189 918 aaPredicted RBP23.05■■□□□ 1.28
RHBDD3-207ENST00000496342 LAS1LQ9Y4W2 734 aaKnown RBP23.05■■□□□ 1.28
RHBDD3-207ENST00000496342 CD2APQ9Y5K6 639 aa23.05■■□□□ 1.28
RHBDD3-207ENST00000496342 PARP3Q9Y6F1 533 aa23.05■■□□□ 1.28
RHBDD3-207ENST00000496342 PXDNLA1KZ92 1463 aa23.04■■□□□ 1.28
RHBDD3-207ENST00000496342 NFIXQ14938 502 aa23.03■■□□□ 1.28
RHBDD3-207ENST00000496342 KRT24Q2M2I5 525 aa23.03■■□□□ 1.28
RHBDD3-207ENST00000496342 ANKRD31Q8N7Z5 1873 aa23.02■■□□□ 1.28
RHBDD3-207ENST00000496342 POLRMTO00411 1230 aaKnown RBP23.02■■□□□ 1.28
RHBDD3-207ENST00000496342 YBX3P16989 372 aaKnown RBP eCLIP23.02■■□□□ 1.28
RHBDD3-207ENST00000496342 BICDL1Q6ZP65 573 aa23.02■■□□□ 1.28
RHBDD3-207ENST00000496342 NUP98P52948 1817 aa23.02■■□□□ 1.28
RHBDD3-207ENST00000496342 A0A087WZG4 1122 aa23.01■■□□□ 1.27
RHBDD3-207ENST00000496342 DCAF8L1A6NGE4 600 aa23.01■■□□□ 1.27
RHBDD3-207ENST00000496342 TM4SF1P30408 202 aa23.01■■□□□ 1.27
RHBDD3-207ENST00000496342 GPR162Q16538 588 aa23.01■■□□□ 1.27
RHBDD3-207ENST00000496342 CAMTA2O94983 1202 aa23■■□□□ 1.27
RHBDD3-207ENST00000496342 TBC1D9BQ66K14 1250 aa23■■□□□ 1.27
RHBDD3-207ENST00000496342 DZIP3Q86Y13 1208 aaKnown RBP23■■□□□ 1.27
RHBDD3-207ENST00000496342 NGEFQ8N5V2 710 aa22.99■■□□□ 1.27
RHBDD3-207ENST00000496342 CHL1O00533 1208 aa22.98■■□□□ 1.27
RHBDD3-207ENST00000496342 CARMIL3Q8ND23 1372 aa22.98■■□□□ 1.27
RHBDD3-207ENST00000496342 DLEC1Q9Y238 1755 aa22.97■■□□□ 1.27
RHBDD3-207ENST00000496342 NECTIN2Q92692 538 aa22.97■■□□□ 1.27
RHBDD3-207ENST00000496342 COL11A2P13942 1736 aaPredicted RBP22.96■■□□□ 1.27
RHBDD3-207ENST00000496342 MYL6BP14649 208 aa22.96■■□□□ 1.27
RHBDD3-207ENST00000496342 EIF2S2P20042 333 aaKnown RBP22.96■■□□□ 1.27
RHBDD3-207ENST00000496342 NPM2Q86SE8 214 aaKnown RBP22.96■■□□□ 1.27
RHBDD3-207ENST00000496342 BABAM1Q9NWV8 329 aa22.96■■□□□ 1.27
RHBDD3-207ENST00000496342 CACNA1SQ13698 1873 aa22.96■■□□□ 1.27
RHBDD3-207ENST00000496342 A0A0G2JLW4 131 aa22.95■■□□□ 1.26
RHBDD3-207ENST00000496342 ANXA1P04083 346 aa22.95■■□□□ 1.26
RHBDD3-207ENST00000496342 MBIPQ9NS73 344 aa22.95■■□□□ 1.26
RHBDD3-207ENST00000496342 SERPINB2P05120 415 aa22.94■■□□□ 1.26
RHBDD3-207ENST00000496342 DPEP1P16444 411 aa22.94■■□□□ 1.26
RHBDD3-207ENST00000496342 PROSER3Q2NL68 480 aa22.94■■□□□ 1.26
RHBDD3-207ENST00000496342 FAM9BQ8IZU0 186 aa22.94■■□□□ 1.26
RHBDD3-207ENST00000496342 CCDC24Q8N4L8 307 aa22.94■■□□□ 1.26
RHBDD3-207ENST00000496342 ARFGEF1Q9Y6D6 1849 aa22.94■■□□□ 1.26
RHBDD3-207ENST00000496342 TTLL7Q6ZT98 887 aa22.93■■□□□ 1.26
RHBDD3-207ENST00000496342 CFAP44Q96MT7 982 aa22.93■■□□□ 1.26
RHBDD3-207ENST00000496342 HLFQ16534 295 aa22.92■■□□□ 1.26
RHBDD3-207ENST00000496342 SALL2Q9Y467 1007 aaPredicted RBP22.92■■□□□ 1.26
RHBDD3-207ENST00000496342 ANKRD36CQ5JPF3 1778 aa22.91■■□□□ 1.26
RHBDD3-207ENST00000496342 ZNF853P0CG23 659 aa22.91■■□□□ 1.26
RHBDD3-207ENST00000496342 CHRNA5P30532 468 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms