RNA–Protein interactions for RNA: ENST00000496202.5

PRPF3-207, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 1 (best)

Gene PRPF3, Length 1,082 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-207ENST00000496202 PSDA5PKW4 1024 aaPredicted RBP12.55□□□□□ -0.4
PRPF3-207ENST00000496202 GNPATO15228 680 aa12.55□□□□□ -0.4
PRPF3-207ENST00000496202 CRKLP46109 303 aaKnown RBP12.55□□□□□ -0.4
PRPF3-207ENST00000496202 EIF4A1P60842 406 aaKnown RBP12.55□□□□□ -0.4
PRPF3-207ENST00000496202 ZNF827Q17R98 1081 aa12.55□□□□□ -0.4
PRPF3-207ENST00000496202 MBIPQ9NS73 344 aa12.55□□□□□ -0.4
PRPF3-207ENST00000496202 CCDC87Q9NVE4 849 aa12.55□□□□□ -0.4
PRPF3-207ENST00000496202 MYH14Q7Z406 1995 aaKnown RBP12.55□□□□□ -0.4
PRPF3-207ENST00000496202 CNTNAP4Q9C0A0 1308 aa12.55□□□□□ -0.4
PRPF3-207ENST00000496202 UBR3Q6ZT12 1888 aa12.55□□□□□ -0.4
PRPF3-207ENST00000496202 QSER1Q2KHR3 1735 aa12.54□□□□□ -0.4
PRPF3-207ENST00000496202 ZNF853P0CG23 659 aa12.54□□□□□ -0.4
PRPF3-207ENST00000496202 CYP19A1P11511 503 aaPredicted RBP12.54□□□□□ -0.4
PRPF3-207ENST00000496202 RC3H1Q5TC82 1133 aaKnown RBP12.54□□□□□ -0.4
PRPF3-207ENST00000496202 AKT1S1Q96B36 256 aa12.54□□□□□ -0.4
PRPF3-207ENST00000496202 MYH16Q9H6N6 1097 aa12.54□□□□□ -0.4
PRPF3-207ENST00000496202 MSH5O43196 834 aa12.53□□□□□ -0.4
PRPF3-207ENST00000496202 PHF14O94880 888 aa12.53□□□□□ -0.4
PRPF3-207ENST00000496202 GOLGA2Q08379 1002 aa12.53□□□□□ -0.4
PRPF3-207ENST00000496202 NPM2Q86SE8 214 aaKnown RBP12.53□□□□□ -0.4
PRPF3-207ENST00000496202 RTCBQ9Y3I0 505 aaKnown RBP12.53□□□□□ -0.4
PRPF3-207ENST00000496202 GIGYF1O75420 1035 aaPredicted RBP12.52□□□□□ -0.41
PRPF3-207ENST00000496202 MYCNP04198 464 aaPredicted RBP12.52□□□□□ -0.41
PRPF3-207ENST00000496202 FLAD1Q8NFF5 587 aa12.52□□□□□ -0.41
PRPF3-207ENST00000496202 TSR2Q969E8 191 aaKnown RBP12.52□□□□□ -0.41
PRPF3-207ENST00000496202 PRAMEF22A3QJZ6 481 aa12.51□□□□□ -0.41
PRPF3-207ENST00000496202 RPS6KA4O75676 772 aa12.51□□□□□ -0.41
PRPF3-207ENST00000496202 CANXP27824 592 aaKnown RBP12.51□□□□□ -0.41
PRPF3-207ENST00000496202 SSFA2P28290 1259 aa12.51□□□□□ -0.41
PRPF3-207ENST00000496202 ZNF330Q9Y3S2 320 aaPredicted RBP12.51□□□□□ -0.41
PRPF3-207ENST00000496202 USP16Q9Y5T5 823 aa12.51□□□□□ -0.41
PRPF3-207ENST00000496202 ZNF521Q96K83 1311 aa12.51□□□□□ -0.41
PRPF3-207ENST00000496202 FANCIQ9NVI1 1328 aa12.51□□□□□ -0.41
PRPF3-207ENST00000496202 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.5□□□□□ -0.41
PRPF3-207ENST00000496202 E9PSI1 815 aa12.5□□□□□ -0.41
PRPF3-207ENST00000496202 HOXB7P09629 217 aa12.5□□□□□ -0.41
PRPF3-207ENST00000496202 EIF2S2P20042 333 aaKnown RBP12.5□□□□□ -0.41
PRPF3-207ENST00000496202 KRT24Q2M2I5 525 aa12.5□□□□□ -0.41
PRPF3-207ENST00000496202 DUSP27Q5VZP5 1158 aa12.5□□□□□ -0.41
PRPF3-207ENST00000496202 INTS5Q6P9B9 1019 aaKnown RBP12.5□□□□□ -0.41
PRPF3-207ENST00000496202 CHMP4AQ9BY43 222 aa12.5□□□□□ -0.41
PRPF3-207ENST00000496202 ZBTB1Q9Y2K1 713 aa12.5□□□□□ -0.41
PRPF3-207ENST00000496202 PNPLA7Q6ZV29 1317 aa12.5□□□□□ -0.41
PRPF3-207ENST00000496202 SOS1Q07889 1333 aaPredicted RBP12.49□□□□□ -0.41
PRPF3-207ENST00000496202 A1BGP04217 495 aa12.49□□□□□ -0.41
PRPF3-207ENST00000496202 TRAPPC3LQ5T215 181 aa12.49□□□□□ -0.41
PRPF3-207ENST00000496202 HDGFL1Q5TGJ6 251 aa12.49□□□□□ -0.41
PRPF3-207ENST00000496202 CASZ1Q86V15 1759 aa12.48□□□□□ -0.41
PRPF3-207ENST00000496202 C4AP0C0L4 1744 aa12.48□□□□□ -0.41
PRPF3-207ENST00000496202 COL15A1P39059 1388 aa12.48□□□□□ -0.41
PRPF3-207ENST00000496202 ERBB4Q15303 1308 aa12.48□□□□□ -0.41
PRPF3-207ENST00000496202 A0A087WZG4 1122 aa12.48□□□□□ -0.41
PRPF3-207ENST00000496202 ELL2O00472 640 aaPredicted RBP12.48□□□□□ -0.41
PRPF3-207ENST00000496202 RFC4P35249 363 aa12.48□□□□□ -0.41
PRPF3-207ENST00000496202 PLCB2Q00722 1185 aa12.48□□□□□ -0.41
PRPF3-207ENST00000496202 NECTIN2Q92692 538 aa12.48□□□□□ -0.41
PRPF3-207ENST00000496202 ARXQ96QS3 562 aa12.48□□□□□ -0.41
PRPF3-207ENST00000496202 ZBED9Q6R2W3 1325 aa12.47□□□□□ -0.41
PRPF3-207ENST00000496202 IL6STP40189 918 aaPredicted RBP12.47□□□□□ -0.41
PRPF3-207ENST00000496202 PIP4K2AP48426 406 aaPredicted RBP12.47□□□□□ -0.41
PRPF3-207ENST00000496202 TWISTNBQ3B726 338 aaPredicted RBP12.47□□□□□ -0.41
PRPF3-207ENST00000496202 SMIM5Q71RC9 77 aa12.47□□□□□ -0.41
PRPF3-207ENST00000496202 COL23A1Q86Y22 540 aaPredicted RBP12.47□□□□□ -0.41
PRPF3-207ENST00000496202 C8orf58Q8NAV2 365 aa12.47□□□□□ -0.41
PRPF3-207ENST00000496202 SPINK5Q9NQ38 1064 aaPredicted RBP12.47□□□□□ -0.41
PRPF3-207ENST00000496202 ZPR1O75312 459 aa12.46□□□□□ -0.41
PRPF3-207ENST00000496202 MYL6BP14649 208 aa12.46□□□□□ -0.41
PRPF3-207ENST00000496202 EIF5P55010 431 aaKnown RBP12.46□□□□□ -0.41
PRPF3-207ENST00000496202 EXOSC9Q06265 439 aaKnown RBP12.46□□□□□ -0.41
PRPF3-207ENST00000496202 SLFN5Q08AF3 891 aa12.46□□□□□ -0.41
PRPF3-207ENST00000496202 AMIGO3Q86WK7 504 aa12.46□□□□□ -0.41
PRPF3-207ENST00000496202 SLC16A10Q8TF71 515 aa12.46□□□□□ -0.41
PRPF3-207ENST00000496202 ARHGEF1Q92888 912 aaKnown RBP12.46□□□□□ -0.41
PRPF3-207ENST00000496202 NBPF26B4DH59 902 aa12.45□□□□□ -0.42
PRPF3-207ENST00000496202 ZBTB7AO95365 584 aa12.45□□□□□ -0.42
PRPF3-207ENST00000496202 CCDC30Q5VVM6 783 aa12.45□□□□□ -0.42
PRPF3-207ENST00000496202 NBPF10Q6P3W6 841 aaKnown RBP12.45□□□□□ -0.42
PRPF3-207ENST00000496202 NBPF15Q8N660 670 aa12.45□□□□□ -0.42
PRPF3-207ENST00000496202 TSPYL6Q8N831 410 aa12.45□□□□□ -0.42
PRPF3-207ENST00000496202 CDCA7LQ96GN5 454 aa12.45□□□□□ -0.42
PRPF3-207ENST00000496202 STK31Q9BXU1 1019 aa12.45□□□□□ -0.42
PRPF3-207ENST00000496202 PDGFDQ9GZP0 370 aaPredicted RBP12.45□□□□□ -0.42
PRPF3-207ENST00000496202 CACNA1FO60840 1977 aa12.45□□□□□ -0.42
PRPF3-207ENST00000496202 DZIP3Q86Y13 1208 aaKnown RBP12.44□□□□□ -0.42
PRPF3-207ENST00000496202 YTHDC1Q96MU7 727 aaKnown RBP12.44□□□□□ -0.42
PRPF3-207ENST00000496202 MTFR1LQ9H019 292 aa12.44□□□□□ -0.42
PRPF3-207ENST00000496202 DDX21Q9NR30 783 aaKnown RBP eCLIP12.44□□□□□ -0.42
PRPF3-207ENST00000496202 CHPF2Q9P2E5 772 aa12.44□□□□□ -0.42
PRPF3-207ENST00000496202 DBF4Q9UBU7 674 aaPredicted RBP12.44□□□□□ -0.42
PRPF3-207ENST00000496202 USP42Q9H9J4 1324 aaKnown RBP12.43□□□□□ -0.42
PRPF3-207ENST00000496202 SCN7AQ01118 1682 aa12.43□□□□□ -0.42
PRPF3-207ENST00000496202 ANXA1P04083 346 aa12.43□□□□□ -0.42
PRPF3-207ENST00000496202 MSL1Q68DK7 614 aa12.43□□□□□ -0.42
PRPF3-207ENST00000496202 KIF6Q6ZMV9 814 aa12.43□□□□□ -0.42
PRPF3-207ENST00000496202 SPON1Q9HCB6 807 aa12.43□□□□□ -0.42
PRPF3-207ENST00000496202 SRP68Q9UHB9 627 aaKnown RBP12.43□□□□□ -0.42
PRPF3-207ENST00000496202 NARFQ9UHQ1 456 aa12.43□□□□□ -0.42
PRPF3-207ENST00000496202 ATF5Q9Y2D1 282 aaPredicted RBP12.43□□□□□ -0.42
PRPF3-207ENST00000496202 POLD1P28340 1107 aa12.42□□□□□ -0.42
PRPF3-207ENST00000496202 HOXD11P31277 338 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms