RNA–Protein interactions for RNA: ENST00000495953.2

RAPGEF3-215, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene RAPGEF3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-215ENST00000495953 ZNF827Q17R98 1081 aa19.99■□□□□ 0.79
RAPGEF3-215ENST00000495953 DUSP27Q5VZP5 1158 aa19.99■□□□□ 0.79
RAPGEF3-215ENST00000495953 STARD3NLO95772 234 aa19.98■□□□□ 0.79
RAPGEF3-215ENST00000495953 EXOSC9Q06265 439 aaKnown RBP19.97■□□□□ 0.79
RAPGEF3-215ENST00000495953 CT47B1P0C2W7 299 aaPredicted RBP19.96■□□□□ 0.79
RAPGEF3-215ENST00000495953 ITPK1Q13572 414 aa19.96■□□□□ 0.79
RAPGEF3-215ENST00000495953 DNAJC10Q8IXB1 793 aa19.96■□□□□ 0.79
RAPGEF3-215ENST00000495953 C8orf58Q8NAV2 365 aa19.96■□□□□ 0.79
RAPGEF3-215ENST00000495953 SPON1Q9HCB6 807 aa19.96■□□□□ 0.79
RAPGEF3-215ENST00000495953 SLC15A2Q16348 729 aa19.95■□□□□ 0.78
RAPGEF3-215ENST00000495953 TWISTNBQ3B726 338 aaPredicted RBP19.95■□□□□ 0.78
RAPGEF3-215ENST00000495953 RC3H1Q5TC82 1133 aaKnown RBP19.95■□□□□ 0.78
RAPGEF3-215ENST00000495953 C4BP0C0L5 1744 aa19.94■□□□□ 0.78
RAPGEF3-215ENST00000495953 QSER1Q2KHR3 1735 aa19.94■□□□□ 0.78
RAPGEF3-215ENST00000495953 CYP19A1P11511 503 aaPredicted RBP19.94■□□□□ 0.78
RAPGEF3-215ENST00000495953 KRT24Q2M2I5 525 aa19.94■□□□□ 0.78
RAPGEF3-215ENST00000495953 STK32BQ9NY57 414 aa19.94■□□□□ 0.78
RAPGEF3-215ENST00000495953 USP16Q9Y5T5 823 aa19.94■□□□□ 0.78
RAPGEF3-215ENST00000495953 ERBB4Q15303 1308 aa19.94■□□□□ 0.78
RAPGEF3-215ENST00000495953 CNTNAP4Q9C0A0 1308 aa19.94■□□□□ 0.78
RAPGEF3-215ENST00000495953 LINC00116Q8NCU8 138 aa19.93■□□□□ 0.78
RAPGEF3-215ENST00000495953 ZNF428Q96B54 188 aa19.93■□□□□ 0.78
RAPGEF3-215ENST00000495953 CACNA1FO60840 1977 aa19.93■□□□□ 0.78
RAPGEF3-215ENST00000495953 PRAMEF22A3QJZ6 481 aa19.92■□□□□ 0.78
RAPGEF3-215ENST00000495953 ELL2O00472 640 aaPredicted RBP19.92■□□□□ 0.78
RAPGEF3-215ENST00000495953 VAMP4O75379 141 aa19.92■□□□□ 0.78
RAPGEF3-215ENST00000495953 ZBTB7AO95365 584 aa19.92■□□□□ 0.78
RAPGEF3-215ENST00000495953 TSPYL6Q8N831 410 aa19.92■□□□□ 0.78
RAPGEF3-215ENST00000495953 CRKLP46109 303 aaKnown RBP19.91■□□□□ 0.78
RAPGEF3-215ENST00000495953 HDGFL1Q5TGJ6 251 aa19.91■□□□□ 0.78
RAPGEF3-215ENST00000495953 CCDC30Q5VVM6 783 aa19.91■□□□□ 0.78
RAPGEF3-215ENST00000495953 CCDC87Q9NVE4 849 aa19.91■□□□□ 0.78
RAPGEF3-215ENST00000495953 PPP1R1BQ9UD71 204 aaPredicted RBP19.91■□□□□ 0.78
RAPGEF3-215ENST00000495953 MYH14Q7Z406 1995 aaKnown RBP19.91■□□□□ 0.78
RAPGEF3-215ENST00000495953 AKT1S1Q96B36 256 aa19.9■□□□□ 0.78
RAPGEF3-215ENST00000495953 EIF2S2P20042 333 aaKnown RBP19.89■□□□□ 0.77
RAPGEF3-215ENST00000495953 AK7Q96M32 723 aa19.89■□□□□ 0.77
RAPGEF3-215ENST00000495953 UBR3Q6ZT12 1888 aa19.88■□□□□ 0.77
RAPGEF3-215ENST00000495953 INTS5Q6P9B9 1019 aaKnown RBP19.88■□□□□ 0.77
RAPGEF3-215ENST00000495953 DBF4Q9UBU7 674 aaPredicted RBP19.88■□□□□ 0.77
RAPGEF3-215ENST00000495953 ATF5Q9Y2D1 282 aaPredicted RBP19.88■□□□□ 0.77
RAPGEF3-215ENST00000495953 RPS6KA4O75676 772 aa19.87■□□□□ 0.77
RAPGEF3-215ENST00000495953 IL6STP40189 918 aaPredicted RBP19.87■□□□□ 0.77
RAPGEF3-215ENST00000495953 STK31Q9BXU1 1019 aa19.87■□□□□ 0.77
RAPGEF3-215ENST00000495953 DDX21Q9NR30 783 aaKnown RBP eCLIP19.87■□□□□ 0.77
RAPGEF3-215ENST00000495953 PNPLA7Q6ZV29 1317 aa19.86■□□□□ 0.77
RAPGEF3-215ENST00000495953 A1BGP04217 495 aa19.86■□□□□ 0.77
RAPGEF3-215ENST00000495953 ALDH1L2Q3SY69 923 aa19.86■□□□□ 0.77
RAPGEF3-215ENST00000495953 SMIM5Q71RC9 77 aa19.86■□□□□ 0.77
RAPGEF3-215ENST00000495953 RTCBQ9Y3I0 505 aaKnown RBP19.86■□□□□ 0.77
RAPGEF3-215ENST00000495953 GNPATO15228 680 aa19.85■□□□□ 0.77
RAPGEF3-215ENST00000495953 ADRA2BP18089 450 aa19.85■□□□□ 0.77
RAPGEF3-215ENST00000495953 NPM2Q86SE8 214 aaKnown RBP19.85■□□□□ 0.77
RAPGEF3-215ENST00000495953 FLAD1Q8NFF5 587 aa19.85■□□□□ 0.77
RAPGEF3-215ENST00000495953 HYPKQ9NX55 129 aa19.85■□□□□ 0.77
RAPGEF3-215ENST00000495953 ZBTB1Q9Y2K1 713 aa19.85■□□□□ 0.77
RAPGEF3-215ENST00000495953 CANXP27824 592 aaKnown RBP19.84■□□□□ 0.77
RAPGEF3-215ENST00000495953 SSFA2P28290 1259 aa19.84■□□□□ 0.77
RAPGEF3-215ENST00000495953 PTGER2P43116 358 aa19.84■□□□□ 0.77
RAPGEF3-215ENST00000495953 PDIA6Q15084 440 aa19.84■□□□□ 0.77
RAPGEF3-215ENST00000495953 AMIGO3Q86WK7 504 aa19.84■□□□□ 0.77
RAPGEF3-215ENST00000495953 NECTIN2Q92692 538 aa19.84■□□□□ 0.77
RAPGEF3-215ENST00000495953 COL24A1Q17RW2 1714 aa19.83■□□□□ 0.77
RAPGEF3-215ENST00000495953 A0A087WZG4 1122 aa19.83■□□□□ 0.77
RAPGEF3-215ENST00000495953 NBPF26B4DH59 902 aa19.83■□□□□ 0.77
RAPGEF3-215ENST00000495953 EIF5P55010 431 aaKnown RBP19.83■□□□□ 0.77
RAPGEF3-215ENST00000495953 NBPF10Q6P3W6 841 aaKnown RBP19.83■□□□□ 0.77
RAPGEF3-215ENST00000495953 NBPF15Q8N660 670 aa19.83■□□□□ 0.77
RAPGEF3-215ENST00000495953 TFCP2L1Q9NZI6 479 aa19.83■□□□□ 0.77
RAPGEF3-215ENST00000495953 CHPF2Q9P2E5 772 aa19.83■□□□□ 0.77
RAPGEF3-215ENST00000495953 TRAPPC3LQ5T215 181 aa19.81■□□□□ 0.76
RAPGEF3-215ENST00000495953 SLC4A2P04920 1241 aa19.8■□□□□ 0.76
RAPGEF3-215ENST00000495953 MYL6BP14649 208 aa19.8■□□□□ 0.76
RAPGEF3-215ENST00000495953 RARSP54136 660 aaKnown RBP19.8■□□□□ 0.76
RAPGEF3-215ENST00000495953 BRPF1P55201 1214 aaPredicted RBP19.8■□□□□ 0.76
RAPGEF3-215ENST00000495953 LRP10Q7Z4F1 713 aa19.8■□□□□ 0.76
RAPGEF3-215ENST00000495953 MTFR1LQ9H019 292 aa19.8■□□□□ 0.76
RAPGEF3-215ENST00000495953 COL15A1P39059 1388 aa19.8■□□□□ 0.76
RAPGEF3-215ENST00000495953 SGIP1Q9BQI5 828 aa19.79■□□□□ 0.76
RAPGEF3-215ENST00000495953 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.78■□□□□ 0.76
RAPGEF3-215ENST00000495953 PIP4K2AP48426 406 aaPredicted RBP19.78■□□□□ 0.76
RAPGEF3-215ENST00000495953 PROSER3Q2NL68 480 aa19.78■□□□□ 0.76
RAPGEF3-215ENST00000495953 SSH1Q8WYL5 1049 aa19.78■□□□□ 0.76
RAPGEF3-215ENST00000495953 C4AP0C0L4 1744 aa19.78■□□□□ 0.76
RAPGEF3-215ENST00000495953 RGL2O15211 777 aa19.77■□□□□ 0.76
RAPGEF3-215ENST00000495953 RFC4P35249 363 aa19.77■□□□□ 0.76
RAPGEF3-215ENST00000495953 COL23A1Q86Y22 540 aaPredicted RBP19.77■□□□□ 0.76
RAPGEF3-215ENST00000495953 MRPL50Q8N5N7 158 aaKnown RBP19.77■□□□□ 0.76
RAPGEF3-215ENST00000495953 ARHGEF1Q92888 912 aaKnown RBP19.77■□□□□ 0.76
RAPGEF3-215ENST00000495953 SMC4Q9NTJ3 1288 aa19.77■□□□□ 0.76
RAPGEF3-215ENST00000495953 ZNF330Q9Y3S2 320 aaPredicted RBP19.77■□□□□ 0.76
RAPGEF3-215ENST00000495953 ANXA1P04083 346 aa19.76■□□□□ 0.75
RAPGEF3-215ENST00000495953 DZIP3Q86Y13 1208 aaKnown RBP19.76■□□□□ 0.75
RAPGEF3-215ENST00000495953 NARFQ9UHQ1 456 aa19.76■□□□□ 0.75
RAPGEF3-215ENST00000495953 ERVV-1B6SEH8 477 aa19.75■□□□□ 0.75
RAPGEF3-215ENST00000495953 TCERG1O14776 1098 aaKnown RBP19.75■□□□□ 0.75
RAPGEF3-215ENST00000495953 PHF14O94880 888 aa19.75■□□□□ 0.75
RAPGEF3-215ENST00000495953 DDX58O95786 925 aaKnown RBP19.75■□□□□ 0.75
RAPGEF3-215ENST00000495953 KIF6Q6ZMV9 814 aa19.75■□□□□ 0.75
RAPGEF3-215ENST00000495953 COPS6Q7L5N1 327 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms