RNA–Protein interactions for RNA: ENST00000494268.1

MSL3-217, Transcript of MSL complex subunit 3, humanhuman

TSL 2

Gene MSL3, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-217ENST00000494268 PPP1R12BO60237 982 aaPredicted RBP11.04□□□□□ -0.64
MSL3-217ENST00000494268 PRMT3O60678 531 aa11.04□□□□□ -0.64
MSL3-217ENST00000494268 CSB-PGBD3P0DP91 1061 aa11.04□□□□□ -0.64
MSL3-217ENST00000494268 NOS2P35228 1153 aa11.04□□□□□ -0.64
MSL3-217ENST00000494268 L3MBTL2Q969R5 705 aa11.04□□□□□ -0.64
MSL3-217ENST00000494268 GAS2L1Q99501 681 aaPredicted RBP11.04□□□□□ -0.64
MSL3-217ENST00000494268 PPFIA3O75145 1194 aa11.03□□□□□ -0.64
MSL3-217ENST00000494268 WEE1P30291 646 aa11.03□□□□□ -0.64
MSL3-217ENST00000494268 TEAD4Q15561 434 aa11.03□□□□□ -0.64
MSL3-217ENST00000494268 SWI5Q1ZZU3 235 aa11.03□□□□□ -0.64
MSL3-217ENST00000494268 NXF1Q9UBU9 619 aaKnown RBP11.03□□□□□ -0.64
MSL3-217ENST00000494268 DYRK1BQ9Y463 629 aa11.03□□□□□ -0.64
MSL3-217ENST00000494268 RETREG2Q8NC44 543 aa11.02□□□□□ -0.65
MSL3-217ENST00000494268 ZNF232Q9UNY5 417 aa11.02□□□□□ -0.65
MSL3-217ENST00000494268 SERTM1A2A2V5 107 aa11.01□□□□□ -0.65
MSL3-217ENST00000494268 MSX1P28360 303 aa11.01□□□□□ -0.65
MSL3-217ENST00000494268 PSMA6P60900 246 aaKnown RBP11.01□□□□□ -0.65
MSL3-217ENST00000494268 ZNF775Q96BV0 537 aaPredicted RBP11.01□□□□□ -0.65
MSL3-217ENST00000494268 GPAMQ9HCL2 828 aa11.01□□□□□ -0.65
MSL3-217ENST00000494268 CUEDC1Q9NWM3 386 aaPredicted RBP11.01□□□□□ -0.65
MSL3-217ENST00000494268 HCN4Q9Y3Q4 1203 aa11.01□□□□□ -0.65
MSL3-217ENST00000494268 EML1O00423 815 aa11□□□□□ -0.65
MSL3-217ENST00000494268 IGFBP4P22692 258 aa11□□□□□ -0.65
MSL3-217ENST00000494268 TXLNAP40222 546 aa11□□□□□ -0.65
MSL3-217ENST00000494268 OCLNQ16625 522 aa11□□□□□ -0.65
MSL3-217ENST00000494268 RIPOR1Q6ZS17 1223 aa11□□□□□ -0.65
MSL3-217ENST00000494268 C2orf49Q9BVC5 232 aaPredicted RBP11□□□□□ -0.65
MSL3-217ENST00000494268 A0A1B0GTH6 734 aa10.99□□□□□ -0.65
MSL3-217ENST00000494268 TERTO14746 1132 aaKnown RBP10.99□□□□□ -0.65
MSL3-217ENST00000494268 F11P03951 625 aa10.99□□□□□ -0.65
MSL3-217ENST00000494268 ITGA6P23229 1130 aa10.99□□□□□ -0.65
MSL3-217ENST00000494268 CLP1Q92989 425 aaKnown RBP10.99□□□□□ -0.65
MSL3-217ENST00000494268 ATP4AP20648 1035 aa10.97□□□□□ -0.65
MSL3-217ENST00000494268 FKBP5Q13451 457 aaPredicted RBP10.97□□□□□ -0.65
MSL3-217ENST00000494268 DBN1Q16643 649 aa10.97□□□□□ -0.65
MSL3-217ENST00000494268 POTEAQ6S8J7 498 aa10.97□□□□□ -0.65
MSL3-217ENST00000494268 RUBCNLQ9H714 662 aa10.97□□□□□ -0.65
MSL3-217ENST00000494268 H3BM21 787 aa10.96□□□□□ -0.65
MSL3-217ENST00000494268 STAG2Q8N3U4 1231 aa10.96□□□□□ -0.65
MSL3-217ENST00000494268 KLRG1Q96E93 195 aa10.96□□□□□ -0.65
MSL3-217ENST00000494268 CXXC1Q9P0U4 656 aaPredicted RBP10.96□□□□□ -0.65
MSL3-217ENST00000494268 CHMP3Q9Y3E7 222 aa10.96□□□□□ -0.65
MSL3-217ENST00000494268 THBS1P07996 1170 aa10.95□□□□□ -0.66
MSL3-217ENST00000494268 ATP2B4P23634 1241 aa10.95□□□□□ -0.66
MSL3-217ENST00000494268 SCNN1AP37088 669 aa10.95□□□□□ -0.66
MSL3-217ENST00000494268 NBPF1Q3BBV0 1214 aa10.95□□□□□ -0.66
MSL3-217ENST00000494268 CAPN12Q6ZSI9 719 aa10.95□□□□□ -0.66
MSL3-217ENST00000494268 VWA5B2Q8N398 1253 aa10.95□□□□□ -0.66
MSL3-217ENST00000494268 C7orf43Q8WVR3 580 aa10.95□□□□□ -0.66
MSL3-217ENST00000494268 NGLY1Q96IV0 654 aa10.95□□□□□ -0.66
MSL3-217ENST00000494268 HIRAP54198 1017 aaPredicted RBP10.94□□□□□ -0.66
MSL3-217ENST00000494268 NFX1Q12986 1120 aaKnown RBP10.94□□□□□ -0.66
MSL3-217ENST00000494268 ARSJQ5FYB0 599 aaPredicted RBP10.94□□□□□ -0.66
MSL3-217ENST00000494268 PHACTR1Q9C0D0 580 aa10.94□□□□□ -0.66
MSL3-217ENST00000494268 ZDHHC3Q9NYG2 299 aa10.94□□□□□ -0.66
MSL3-217ENST00000494268 USTQ9Y2C2 406 aa10.94□□□□□ -0.66
MSL3-217ENST00000494268 FOXO3O43524 673 aa10.93□□□□□ -0.66
MSL3-217ENST00000494268 TATP17735 454 aaPredicted RBP10.93□□□□□ -0.66
MSL3-217ENST00000494268 NPAS3Q8IXF0 933 aa10.93□□□□□ -0.66
MSL3-217ENST00000494268 ALDH16A1Q8IZ83 802 aa10.93□□□□□ -0.66
MSL3-217ENST00000494268 ZIC5Q96T25 663 aa10.93□□□□□ -0.66
MSL3-217ENST00000494268 MKNK1Q9BUB5 465 aa10.93□□□□□ -0.66
MSL3-217ENST00000494268 ERBB4Q15303 1308 aa10.92□□□□□ -0.66
MSL3-217ENST00000494268 CDC14CA4D256 554 aa10.92□□□□□ -0.66
MSL3-217ENST00000494268 PHLDB3Q6NSJ2 640 aa10.92□□□□□ -0.66
MSL3-217ENST00000494268 TRIM22Q8IYM9 498 aa10.92□□□□□ -0.66
MSL3-217ENST00000494268 PGBD3Q8N328 593 aa10.92□□□□□ -0.66
MSL3-217ENST00000494268 C1orf216Q8TAB5 229 aa10.92□□□□□ -0.66
MSL3-217ENST00000494268 A0A1W2PNR3 127 aa10.91□□□□□ -0.66
MSL3-217ENST00000494268 SSFA2P28290 1259 aa10.91□□□□□ -0.66
MSL3-217ENST00000494268 LCE2CQ5TA81 110 aa10.91□□□□□ -0.66
MSL3-217ENST00000494268 BICDL1Q6ZP65 573 aa10.91□□□□□ -0.66
MSL3-217ENST00000494268 GPR161Q8N6U8 529 aaKnown RBP10.91□□□□□ -0.66
MSL3-217ENST00000494268 VTI1AQ96AJ9 217 aa10.91□□□□□ -0.66
MSL3-217ENST00000494268 ZNF837Q96EG3 531 aaPredicted RBP10.91□□□□□ -0.66
MSL3-217ENST00000494268 C1orf53Q5VUE5 145 aa10.9□□□□□ -0.66
MSL3-217ENST00000494268 NANOS1Q8WY41 292 aaKnown RBP10.9□□□□□ -0.66
MSL3-217ENST00000494268 NUCKS1Q9H1E3 243 aaKnown RBP10.9□□□□□ -0.66
MSL3-217ENST00000494268 CRISPLD1Q9H336 500 aa10.9□□□□□ -0.66
MSL3-217ENST00000494268 H7C1W4 665 aa10.89□□□□□ -0.67
MSL3-217ENST00000494268 SV2AQ7L0J3 742 aa10.89□□□□□ -0.67
MSL3-217ENST00000494268 RHPN1Q8TCX5 695 aa10.89□□□□□ -0.67
MSL3-217ENST00000494268 SLC16A10Q8TF71 515 aa10.89□□□□□ -0.67
MSL3-217ENST00000494268 GTPBP3Q969Y2 492 aaKnown RBP10.89□□□□□ -0.67
MSL3-217ENST00000494268 UBAP2LQ14157 1087 aaKnown RBP10.88□□□□□ -0.67
MSL3-217ENST00000494268 NAA30Q147X3 362 aaPredicted RBP10.88□□□□□ -0.67
MSL3-217ENST00000494268 QTRT2Q9H974 415 aaKnown RBP10.88□□□□□ -0.67
MSL3-217ENST00000494268 GPR25O00155 361 aa10.87□□□□□ -0.67
MSL3-217ENST00000494268 WFS1O76024 890 aa10.87□□□□□ -0.67
MSL3-217ENST00000494268 LRRC69Q6ZNQ3 347 aa10.87□□□□□ -0.67
MSL3-217ENST00000494268 ZNF280CQ8ND82 737 aa10.87□□□□□ -0.67
MSL3-217ENST00000494268 SAP130Q9H0E3 1048 aa10.87□□□□□ -0.67
MSL3-217ENST00000494268 SEPT3Q9UH03 358 aa10.87□□□□□ -0.67
MSL3-217ENST00000494268 EFHC2Q5JST6 749 aa10.86□□□□□ -0.67
MSL3-217ENST00000494268 TREML4Q6UXN2 200 aa10.86□□□□□ -0.67
MSL3-217ENST00000494268 GMCL1Q96IK5 515 aa10.86□□□□□ -0.67
MSL3-217ENST00000494268 HSH2DQ96JZ2 352 aa10.86□□□□□ -0.67
MSL3-217ENST00000494268 ZCCHC2Q9C0B9 1178 aaKnown RBP10.86□□□□□ -0.67
MSL3-217ENST00000494268 LRFN2Q9ULH4 789 aa10.86□□□□□ -0.67
MSL3-217ENST00000494268 RTN1Q16799 776 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms